MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 111544 bp
Accession: NZ_CP060874 Location: 1..111544 Organism: Escherichia coli strain EC27 Replicon: plasmid pEC27-2
Accession: NZ_CP060874 Location: 1..111544 Organism: Escherichia coli strain EC27 Replicon: plasmid pEC27-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9210_RS23270 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| H9210_RS23275 (1263) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| H9210_RS23280 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| H9210_RS23285 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| H9210_RS23290 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| H9210_RS23295 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| H9210_RS23300 (5504) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| H9210_RS23305 (6210) | 6210..8180 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| H9210_RS23310 (8187) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| H9210_RS23315 (9041) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| H9210_RS23320 (9717) | 9717..10499 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| H9210_RS23325 (10496) | 10496..11518 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| H9210_RS23330 (11604) | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| H9210_RS23335 (12598) | 12598..12972 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| H9210_RS23340 (12997) | 12997..13701 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9210_RS23345 (13778) | 13778..15970 | + | 2193 | WP_241424632.1 | TonB-dependent receptor | - |
| H9210_RS23350 (16039) | 16039..17214 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| H9210_RS23355 (17737) | 17737..18042 | - | 306 | Protein_17 | IS91 family transposase ISSbo1 | Transposase |
| H9210_RS23360 (18068) | 18068..18807 | + | 740 | Protein_18 | IS3 family transposase IS629 | Transposase |
| H9210_RS23365 (19480) | 19480..20988 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| H9210_RS23370 (21072) | 21072..21551 | + | 480 | Protein_20 | IS3 family transposase IS629 | Transposase |
| H9210_RS23375 (21554) | 21554..22123 | - | 570 | WP_001336919.1 | Serine protease EspC | VF |
| H9210_RS23380 (22225) | 22225..23108 | + | 884 | Protein_22 | IS5 family transposase ISKpn26 | Transposase |
| H9210_RS23385 (23159) | 23159..23472 | - | 314 | Protein_23 | Tn3 family transposase | - |
| H9210_RS23390 (23499) | 23499..24251 | - | 753 | WP_000734115.1 | alpha/beta hydrolase | - |
| H9210_RS23395 (24493) | 24493..25365 | + | 873 | WP_000090196.1 | DMT family transporter | - |
| H9210_RS23400 (25496) | 25496..26719 | + | 1224 | WP_000872613.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| H9210_RS23405 (26905) | 26905..27678 | - | 774 | WP_032152933.1 | SDR family oxidoreductase | - |
| H9210_RS23410 (27744) | 27744..28445 | - | 702 | WP_053908471.1 | DsbA family oxidoreductase | - |
| H9210_RS23415 (28511) | 28511..29617 | - | 1107 | WP_000039982.1 | alkene reductase | - |
| H9210_RS23420 (29831) | 29831..30160 | + | 330 | WP_002431133.1 | thioredoxin family protein | - |
| H9210_RS23425 (30190) | 30190..30528 | - | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| H9210_RS23430 (30533) | 30533..31114 | - | 582 | WP_000210409.1 | HTH-type transcriptional repressor NemR | VF |
| H9210_RS23435 (31256) | 31256..31813 | - | 558 | WP_000108589.1 | OsmC family protein | - |
| H9210_RS23440 (31998) | 31998..32477 | - | 480 | Protein_34 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| H9210_RS23445 (32530) | 32530..33234 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9210_RS23450 (33300) | 33300..33587 | + | 288 | Protein_36 | IS1380 family transposase ISEcp1 | Transposase |
| H9210_RS23455 (33843) | 33843..34718 | + | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| H9210_RS23460 (34765) | 34765..35058 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| H9210_RS23465 (35123) | 35123..37342 | + | 2220 | Protein_39 | Tn3 family transposase TnpA_Tn3 | Transposase |
| H9210_RS23470 (37419) | 37419..38123 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9210_RS23475 (38177) | 38177..38617 | - | 441 | Protein_41 | CatB-related O-acetyltransferase | - |
| H9210_RS23480 (38755) | 38755..39585 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| H9210_RS23485 (39716) | 39716..40270 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| H9210_RS23490 (40414) | 40414..41118 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H9210_RS23495 (41184) | 41184..42698 | + | 1515 | Protein_45 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| H9210_RS23500 (42740) | 42740..42982 | + | 243 | WP_032140899.1 | hypothetical protein | - |
| H9210_RS23505 (43014) | 43014..43664 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| H9210_RS23510 (43770) | 43770..44969 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| H9210_RS23515 (45001) | 45001..45885 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| H9210_RS23520 (46023) | 46023..46415 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| H9210_RS23525 (46419) | 46419..47168 | + | 750 | Protein_51 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| H9210_RS23530 (47192) | 47192..47797 | - | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| H9210_RS23535 (47892) | 47892..50789 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| H9210_RS23540 (50926) | 50926..51327 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H9210_RS23545 (51260) | 51260..51517 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H9210_RS23550 (51610) | 51610..52263 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H9210_RS23555 (53202) | 53202..54059 | - | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| H9210_RS23560 (54052) | 54052..54126 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| H9210_RS23565 (54361) | 54361..54618 | - | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| H9210_RS23570 (55023) | 55023..56045 | + | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| H9210_RS23575 (56517) | 56517..56870 | + | 354 | WP_000005489.1 | hypothetical protein | - |
| H9210_RS23580 (57283) | 57283..57861 | - | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| H9210_RS23585 (57894) | 57894..58591 | + | 698 | WP_223230354.1 | IS1 family transposase IS1S | Transposase |
| H9210_RS23590 (58706) | 58706..59062 | + | 357 | WP_000229735.1 | transposase | - |
| H9210_RS23595 (59059) | 59059..59409 | + | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
| H9210_RS23600 (59440) | 59440..59661 | + | 222 | WP_000080227.1 | hypothetical protein | - |
| H9210_RS23605 (59613) | 59613..59954 | + | 342 | Protein_67 | transposase | - |
| H9210_RS23610 (60018) | 60018..60497 | - | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| H9210_RS23615 (60578) | 60578..61981 | - | 1404 | WP_000514417.1 | YfcC family protein | - |
| H9210_RS23620 (62029) | 62029..63033 | - | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| H9210_RS23625 (63118) | 63118..64029 | - | 912 | WP_000440183.1 | carbamate kinase | - |
| H9210_RS23630 (64040) | 64040..65260 | - | 1221 | WP_000410951.1 | arginine deiminase | - |
| H9210_RS23635 (65967) | 65967..66581 | + | 615 | Protein_73 | VENN motif pre-toxin domain-containing protein | - |
| H9210_RS23640 (66581) | 66581..67027 | - | 447 | Protein_74 | plasmid replication initiator RepA | - |
| H9210_RS23645 (67020) | 67020..67094 | - | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| H9210_RS23650 (67330) | 67330..67587 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| H9210_RS23655 (67871) | 67871..68020 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (68064) | 68064..68125 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (68064) | 68064..68125 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (68064) | 68064..68125 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (68064) | 68064..68125 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| H9210_RS23660 (68264) | 68264..68446 | - | 183 | WP_000968309.1 | hypothetical protein | - |
| H9210_RS23665 (68547) | 68547..69163 | + | 617 | Protein_79 | IS1 family transposase IS1G | Transposase |
| H9210_RS23670 (69201) | 69201..70772 | - | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
| H9210_RS23675 (70792) | 70792..71139 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| H9210_RS23680 (71139) | 71139..71816 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| H9210_RS23685 (71871) | 71871..71960 | + | 90 | Protein_83 | IS1 family transposase | - |
| H9210_RS23690 (72261) | 72261..72473 | - | 213 | WP_005012601.1 | hypothetical protein | - |
| H9210_RS23695 (72607) | 72607..73167 | - | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| H9210_RS23700 (73222) | 73222..73968 | - | 747 | WP_023149624.1 | conjugal transfer pilus acetylase TraX | - |
| H9210_RS23705 (73988) | 73988..75448 | - | 1461 | Protein_87 | Multifunctional conjugation protein TraI | Relaxase |
| H9210_RS23710 (75450) | 75450..75958 | - | 509 | Protein_88 | hydrolase | - |
| H9210_RS23715 (76010) | 76010..76240 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| H9210_RS23720 (76752) | 76752..77000 | + | 249 | WP_071781657.1 | hypothetical protein | - |
| H9210_RS23725 (77272) | 77272..77463 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| H9210_RS23730 (77460) | 77460..77882 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| H9210_RS23735 (77929) | 77929..78354 | - | 426 | WP_001546490.1 | antirestriction protein | - |
| H9210_RS23740 (78768) | 78768..79538 | - | 771 | WP_001006251.1 | hypothetical protein | - |
| H9210_RS23745 (79583) | 79583..80101 | - | 519 | WP_223349485.1 | DUF1380 family protein | - |
| H9210_RS23750 (80031) | 80031..80252 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| H9210_RS23755 (80253) | 80253..80936 | - | 684 | WP_032181561.1 | DNA methylase | - |
| H9210_RS23760 (81013) | 81013..81324 | - | 312 | WP_012615291.1 | hypothetical protein | - |
| H9210_RS23765 (81321) | 81321..82223 | - | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| H9210_RS23770 (82961) | 82961..83932 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H9210_RS23775 (83932) | 83932..85098 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| H9210_RS23780 (85686) | 85686..86441 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| H9210_RS23785 (87163) | 87163..87969 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| H9210_RS23790 (87970) | 87970..88275 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H9210_RS23795 (88277) | 88277..88495 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| H9210_RS23800 (89055) | 89055..89285 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| H9210_RS23805 (89282) | 89282..89698 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H9210_RS23810 (89773) | 89773..91338 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| H9210_RS23815 (91323) | 91323..92345 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| H9210_RS23820 (92599) | 92599..93285 | - | 687 | Protein_110 | IS1 family transposase IS1S | Transposase |
| H9210_RS23825 (93811) | 93811..96012 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| H9210_RS23830 (96038) | 96038..97371 | - | 1334 | Protein_112 | L-lysine N6-monooxygenase | VF |
| H9210_RS23835 (97368) | 97368..99110 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| H9210_RS23840 (99110) | 99110..100057 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| H9210_RS23845 (100058) | 100058..101782 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| H9210_RS23850 (101918) | 101918..103111 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| H9210_RS23855 (103491) | 103491..103871 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| H9210_RS23860 (104212) | 104212..104625 | - | 414 | Protein_118 | phosphopyruvate hydratase | - |
| H9210_RS23865 (104623) | 104623..104880 | + | 258 | Protein_119 | Tn3 family transposase | - |
| H9210_RS23870 (105114) | 105114..105971 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| H9210_RS23875 (105968) | 105968..106825 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| H9210_RS23880 (106822) | 106822..107649 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| H9210_RS23885 (107649) | 107649..108563 | - | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| H9210_RS23890 (108919) | 108919..109616 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| H9210_RS23895 (109796) | 109796..110309 | - | 514 | Protein_125 | DUF4113 domain-containing protein | - |
| H9210_RS23900 (110370) | 110370..110474 | - | 105 | Protein_126 | AAA family ATPase | - |
| H9210_RS23905 (110476) | 110476..110799 | - | 324 | Protein_127 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|