MGE detailed information
MGE type: Conjugative plasmid MGE length: 87603 bp
Accession: NZ_CP060869 Location: 1..87603 Organism: Escherichia coli strain EC29 Replicon: plasmid pEC29-3
Accession: NZ_CP060869 Location: 1..87603 Organism: Escherichia coli strain EC29 Replicon: plasmid pEC29-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9211_RS24490 (46) | 46..1077 | + | 1032 | WP_000907852.1 | plasmid replication initiator RepA | - |
| H9211_RS24495 (1981) | 1981..2265 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| H9211_RS24500 (2265) | 2265..2540 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H9211_RS24505 (2646) | 2646..2849 | + | 204 | Protein_3 | hypothetical protein | - |
| H9211_RS24510 (3119) | 3119..3385 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| H9211_RS24515 (3385) | 3385..3879 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| H9211_RS24520 (3935) | 3935..4537 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| H9211_RS24525 (4713) | 4713..5765 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| H9211_RS24530 (5978) | 5978..6568 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| H9211_RS24535 (6568) | 6568..6822 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| H9211_RS24540 (7089) | 7089..8588 | + | 1500 | WP_001542563.1 | RES family NAD+ phosphorylase | - |
| H9211_RS24545 (8613) | 8613..9476 | - | 864 | WP_000654832.1 | hypothetical protein | - |
| H9211_RS24550 (9999) | 9999..10313 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| H9211_RS24555 (10375) | 10375..11145 | + | 771 | WP_001302622.1 | hypothetical protein | - |
| H9211_RS24560 (11190) | 11190..11975 | + | 786 | WP_077249540.1 | site-specific integrase | - |
| H9211_RS24565 (12113) | 12113..12388 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| H9211_RS24570 (12382) | 12382..13026 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| H9211_RS24575 (13255) | 13255..14226 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| H9211_RS24580 (14231) | 14231..14623 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| H9211_RS24585 (14628) | 14628..15899 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| H9211_RS24590 (15899) | 15899..16336 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9211_RS24595 (16333) | 16333..16581 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H9211_RS24600 (16999) | 16999..17901 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| H9211_RS24605 (17905) | 17905..18210 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| H9211_RS24610 (18286) | 18286..18969 | + | 684 | WP_000086137.1 | DNA methylase | - |
| H9211_RS24615 (18970) | 18970..19191 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| H9211_RS24620 (19121) | 19121..19639 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| H9211_RS24625 (19684) | 19684..20454 | + | 771 | WP_052980418.1 | hypothetical protein | - |
| H9211_RS24630 (20871) | 20871..21296 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| H9211_RS24635 (21343) | 21343..21765 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| H9211_RS24640 (21762) | 21762..21953 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| H9211_RS24645 (22724) | 22724..23251 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| H9211_RS24650 (23309) | 23309..23542 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| H9211_RS24655 (23601) | 23601..25559 | + | 1959 | WP_058649951.1 | ParB/RepB/Spo0J family partition protein | - |
| H9211_RS24660 (25614) | 25614..26048 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| H9211_RS24665 (26045) | 26045..26764 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| H9211_RS24670 (26761) | 26761..27357 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| H9211_RS24675 (27820) | 27820..28320 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| H9211_RS24680 (29049) | 29049..29483 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| H9211_RS24685 (29576) | 29576..29842 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| H9211_RS24690 (29907) | 29907..30821 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| H9211_RS24695 (30821) | 30821..31066 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| H9211_RS24700 (31097) | 31097..31348 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| H9211_RS24705 (31928) | 31928..32776 | + | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| H9211_RS24710 (32862) | 32862..33197 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H9211_RS24715 (33431) | 33431..33763 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H9211_RS24720 (33774) | 33774..36473 | + | 2700 | WP_006855641.1 | Protein TraI | Relaxase |
| H9211_RS24725 (36510) | 36510..38801 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| H9211_RS24730 (38794) | 38794..39864 | - | 1071 | WP_112041324.1 | IncI1-type conjugal transfer protein TrbB | - |
| H9211_RS24735 (39883) | 39883..41091 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| H9211_RS24740 (41309) | 41309..42262 | - | 954 | WP_021513958.1 | hypothetical protein | - |
| - (42456) | 42456..42513 | - | 58 | NuclAT_0 | - | - |
| - (42456) | 42456..42513 | - | 58 | NuclAT_0 | - | - |
| - (42456) | 42456..42513 | - | 58 | NuclAT_0 | - | - |
| - (42456) | 42456..42513 | - | 58 | NuclAT_0 | - | - |
| H9211_RS24745 (42568) | 42568..42720 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| H9211_RS24750 (42792) | 42792..43043 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| H9211_RS25210 (43542) | 43542..43637 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| H9211_RS24760 (43702) | 43702..43878 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| H9211_RS24765 (44210) | 44210..44419 | + | 210 | WP_112041325.1 | HEAT repeat domain-containing protein | - |
| H9211_RS24770 (44491) | 44491..45153 | - | 663 | WP_000644792.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H9211_RS24775 (45218) | 45218..47386 | - | 2169 | WP_077250315.1 | DotA/TraY family protein | - |
| H9211_RS24780 (47483) | 47483..48067 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| H9211_RS24785 (48096) | 48096..49298 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| H9211_RS24790 (49265) | 49265..49879 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| H9211_RS24795 (49879) | 49879..52923 | - | 3045 | WP_106108247.1 | IncI1-type conjugal transfer protein TraU | - |
| H9211_RS24800 (53013) | 53013..53813 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| H9211_RS24805 (53797) | 53797..53985 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H9211_RS24810 (54049) | 54049..54453 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| H9211_RS24815 (54504) | 54504..55031 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H9211_RS24820 (55031) | 55031..55735 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| H9211_RS24825 (55735) | 55735..57024 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| H9211_RS24830 (57027) | 57027..58010 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| H9211_RS24835 (58021) | 58021..58713 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| H9211_RS24840 (58710) | 58710..59057 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H9211_RS24845 (59075) | 59075..62841 | - | 3767 | Protein_71 | DUF5710 domain-containing protein | - |
| H9211_RS24850 (62931) | 62931..63482 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| H9211_RS24855 (63497) | 63497..63787 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| H9211_RS24860 (63784) | 63784..64932 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| H9211_RS24865 (64929) | 64929..65747 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| H9211_RS24870 (65744) | 65744..66202 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| H9211_RS24875 (66597) | 66597..67181 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| H9211_RS24880 (67241) | 67241..68443 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| H9211_RS24885 (68529) | 68529..69353 | - | 825 | WP_015058912.1 | conjugal transfer protein TraE | - |
| H9211_RS24890 (69504) | 69504..70658 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| H9211_RS24895 (70928) | 70928..71176 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| H9211_RS24900 (72317) | 72317..73699 | - | 1383 | WP_234030855.1 | hypothetical protein | VF |
| H9211_RS24905 (73687) | 73687..74343 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| H9211_RS24910 (74328) | 74328..74888 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| H9211_RS24915 (74898) | 74898..75512 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| H9211_RS24920 (75529) | 75529..76614 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H9211_RS24925 (76627) | 76627..78180 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H9211_RS24930 (78191) | 78191..78643 | - | 453 | WP_058649963.1 | hypothetical protein | VF |
| H9211_RS24935 (78630) | 78630..79925 | - | 1296 | WP_058649964.1 | type 4b pilus protein PilO2 | - |
| H9211_RS24940 (79918) | 79918..81600 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| H9211_RS24945 (81614) | 81614..82051 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| H9211_RS24950 (82051) | 82051..83118 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| H9211_RS24955 (83870) | 83870..84124 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| H9211_RS24960 (84296) | 84296..84979 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| H9211_RS24965 (85233) | 85233..85766 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| H9211_RS24970 (86208) | 86208..86495 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| H9211_RS24975 (86413) | 86413..86691 | - | 279 | WP_219065241.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|