MGE detailed information
MGE type: Prophage MGE length: 59707 bp
Accession: NZ_CP060674 Location: 1562305..1622011 Organism: Salmonella enterica strain 190729_4 Replicon: chromosome
Accession: NZ_CP060674 Location: 1562305..1622011 Organism: Salmonella enterica strain 190729_4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q84_RS07450 () | 1558578..1559219 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| H9Q84_RS07455 () | 1559319..1560497 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| H9Q84_RS07460 () | 1560628..1560918 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| H9Q84_RS07465 () | 1560986..1561339 | + | 354 | WP_001042123.1 | protein YebF | - |
| H9Q84_RS07470 () | 1561433..1562092 | + | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| H9Q84_RS07475 () | 1562305..1564356 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| H9Q84_RS07480 () | 1564393..1565091 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| H9Q84_RS07485 () | 1565115..1565771 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| H9Q84_RS07490 () | 1565879..1566109 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| H9Q84_RS07495 () | 1566247..1566621 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| H9Q84_RS07500 () | 1566622..1567497 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| H9Q84_RS07505 () | 1567514..1567867 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 1567967..1568112 | - | 146 | - | - | Antitoxin Detail |
| - | 1568007..1568110 | + | 104 | - | - | Toxin Detail |
| H9Q84_RS07510 () | 1568250..1569329 | - | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| H9Q84_RS07515 () | 1569304..1569582 | - | 279 | WP_001575998.1 | excisionase | - |
| H9Q84_RS07520 () | 1569996..1571975 | + | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| H9Q84_RS07525 () | 1572294..1572392 | + | 99 | WP_223151200.1 | hypothetical protein | - |
| H9Q84_RS07530 () | 1572694..1572912 | + | 219 | WP_001524708.1 | hypothetical protein | - |
| H9Q84_RS07535 () | 1572976..1573575 | + | 600 | WP_000940753.1 | DUF1367 family protein | - |
| H9Q84_RS07540 () | 1573659..1573799 | + | 141 | Protein_1470 | recombination protein NinG | - |
| H9Q84_RS07545 () | 1573796..1573932 | + | 137 | Protein_1471 | YlcG family protein | - |
| H9Q84_RS07550 () | 1573929..1574618 | + | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| H9Q84_RS07555 () | 1574712..1575239 | + | 528 | WP_000971762.1 | hypothetical protein | - |
| H9Q84_RS07560 () | 1575613..1576062 | - | 450 | WP_000798708.1 | hypothetical protein | - |
| H9Q84_RS07565 () | 1576423..1577109 | - | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| H9Q84_RS07570 () | 1577385..1577714 | + | 330 | WP_001574216.1 | phage holin, lambda family | - |
| H9Q84_RS07575 () | 1577698..1578150 | + | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| H9Q84_RS07580 () | 1578168..1578647 | + | 480 | WP_001541990.1 | lysis protein | - |
| H9Q84_RS07585 () | 1578855..1579166 | + | 312 | Protein_1479 | DUF1441 family protein | - |
| H9Q84_RS07590 () | 1579246..1579425 | + | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| H9Q84_RS07595 () | 1579542..1580075 | - | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| H9Q84_RS07600 () | 1580165..1580860 | + | 696 | WP_001152416.1 | phage minor tail protein L | - |
| H9Q84_RS07605 () | 1580870..1581130 | + | 261 | Protein_1483 | C40 family peptidase | - |
| H9Q84_RS07610 () | 1581130..1583461 | + | 2332 | Protein_1484 | host specificity protein J | - |
| H9Q84_RS07615 () | 1583531..1584364 | + | 834 | WP_077943317.1 | DUF1983 domain-containing protein | - |
| H9Q84_RS07620 () | 1584369..1584713 | + | 345 | Protein_1486 | tail fiber assembly protein | - |
| H9Q84_RS07625 () | 1584915..1585637 | - | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| H9Q84_RS07630 () | 1585847..1586088 | + | 242 | Protein_1488 | recombinase family protein | - |
| H9Q84_RS07635 () | 1586117..1586917 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| H9Q84_RS07640 () | 1587862..1588784 | - | 923 | Protein_1490 | hypothetical protein ; Integrase | Integrase |
| H9Q84_RS07645 () | 1589048..1589509 | - | 462 | Protein_1491 | DNA breaking-rejoining protein | - |
| H9Q84_RS07650 () | 1589498..1589689 | + | 192 | Protein_1492 | glycoside hydrolase family 19 protein | - |
| H9Q84_RS07655 () | 1589743..1590276 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| H9Q84_RS07660 () | 1590533..1590700 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| H9Q84_RS07665 () | 1590765..1590953 | - | 189 | WP_001576014.1 | hypothetical protein | - |
| H9Q84_RS07670 () | 1591008..1591499 | + | 492 | WP_000348541.1 | DUF1441 family protein | - |
| H9Q84_RS07675 () | 1591486..1592053 | + | 568 | Protein_1497 | phage terminase large subunit family protein | - |
| H9Q84_RS07680 () | 1592052..1593283 | + | 1232 | Protein_1498 | tail fiber protein | - |
| H9Q84_RS07685 () | 1593293..1593580 | + | 288 | Protein_1499 | macro domain-containing protein | - |
| H9Q84_RS07690 () | 1593593..1594104 | + | 512 | Protein_1500 | tail fiber assembly protein | - |
| H9Q84_RS07695 () | 1594201..1594401 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| H9Q84_RS07700 () | 1594791..1594971 | - | 181 | Protein_1502 | IS3 family transposase | - |
| H9Q84_RS07705 () | 1594962..1595063 | + | 102 | Protein_1503 | arsenic transporter | - |
| H9Q84_RS07710 () | 1595672..1595904 | + | 233 | Protein_1504 | helix-turn-helix domain-containing protein | - |
| H9Q84_RS07715 () | 1596231..1596845 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| H9Q84_RS07720 () | 1596855..1597013 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| H9Q84_RS07725 () | 1597146..1598060 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| H9Q84_RS07730 () | 1599310..1599776 | - | 467 | Protein_1508 | tyrosine-type recombinase/integrase | - |
| H9Q84_RS07735 () | 1599846..1601053 | + | 1208 | Protein_1509 | IS256 family transposase ISEc39 | Transposase |
| H9Q84_RS07740 () | 1601199..1601339 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| H9Q84_RS07745 () | 1601505..1601774 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| H9Q84_RS07750 () | 1602147..1602566 | + | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| H9Q84_RS07755 () | 1602939..1603415 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| H9Q84_RS07760 () | 1603745..1604140 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| H9Q84_RS07765 () | 1604824..1605546 | + | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| H9Q84_RS07770 () | 1605831..1605995 | + | 165 | WP_001134856.1 | membrane protein | - |
| H9Q84_RS07775 () | 1606219..1606869 | + | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| H9Q84_RS07780 () | 1606888..1607079 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| H9Q84_RS07785 () | 1607190..1607426 | - | 237 | WP_024131108.1 | YebV family protein | - |
| H9Q84_RS07790 () | 1607544..1608983 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| H9Q84_RS07795 () | 1609061..1611694 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| H9Q84_RS07800 () | 1611663..1612946 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| H9Q84_RS07805 () | 1613075..1613572 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| H9Q84_RS07810 () | 1613670..1614356 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| H9Q84_RS07815 () | 1614376..1616424 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| H9Q84_RS07820 () | 1616618..1617499 | + | 882 | WP_000984498.1 | protease HtpX | - |
| H9Q84_RS07825 () | 1617547..1618920 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| H9Q84_RS07830 () | 1619096..1619887 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| H9Q84_RS07835 () | 1620099..1620338 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| H9Q84_RS07840 () | 1620496..1620639 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| H9Q84_RS07845 () | 1620710..1620997 | + | 288 | WP_001000660.1 | YebO family protein | - |
| H9Q84_RS07850 () | 1621646..1621789 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| H9Q84_RS07855 () | 1621802..1622011 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| H9Q84_RS07860 () | 1622231..1623976 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| H9Q84_RS07865 () | 1624042..1624851 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| H9Q84_RS07870 () | 1624848..1625414 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| H9Q84_RS07875 () | 1625824..1626282 | - | 459 | WP_000156284.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|