MGE detailed information
MGE type: Prophage MGE length: 61118 bp
Accession: NZ_CP060670 Location: 1215055..1276172 Organism: Salmonella enterica strain 190807_1 Replicon: chromosome
Accession: NZ_CP060670 Location: 1215055..1276172 Organism: Salmonella enterica strain 190807_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9Q86_RS05785 () | 1210181..1210702 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| H9Q86_RS05790 () | 1210704..1211303 | - | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| H9Q86_RS05795 () | 1211512..1212204 | + | 693 | WP_001680382.1 | hypothetical protein | - |
| H9Q86_RS05800 () | 1212564..1213175 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| H9Q86_RS05805 () | 1213184..1214194 | + | 1011 | WP_000568508.1 | Holliday junction branch migration DNA helicase RuvB | - |
| H9Q86_RS05810 () | 1214273..1215058 | - | 786 | WP_000571508.1 | zinc ABC transporter permease subunit ZnuB | - |
| H9Q86_RS05815 () | 1215055..1215810 | - | 756 | WP_000203023.1 | NAD kinase | VF |
| H9Q86_RS05820 () | 1215889..1216833 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| H9Q86_RS05825 () | 1216849..1218168 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| H9Q86_RS05830 () | 1218285..1219256 | + | 972 | WP_000448401.1 | Copper transporter MctB | VF |
| H9Q86_RS05835 () | 1219329..1220771 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| H9Q86_RS05840 () | 1220895..1221764 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| H9Q86_RS05845 () | 1222106..1223581 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| H9Q86_RS05850 () | 1223816..1225627 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| H9Q86_RS05855 () | 1225665..1226306 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| H9Q86_RS05860 () | 1226406..1227584 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| H9Q86_RS05865 () | 1227715..1228005 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| H9Q86_RS05870 () | 1228073..1228426 | + | 354 | WP_001042123.1 | protein YebF | - |
| H9Q86_RS05875 () | 1228520..1229179 | + | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| H9Q86_RS05880 () | 1229392..1231443 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| H9Q86_RS05885 () | 1231480..1232178 | - | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| H9Q86_RS05890 () | 1232202..1232858 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| H9Q86_RS05895 () | 1232966..1233196 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| H9Q86_RS05900 () | 1233334..1233708 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| H9Q86_RS05905 () | 1233709..1234584 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| H9Q86_RS05910 () | 1234601..1234954 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 1235054..1235199 | - | 146 | - | - | Antitoxin Detail |
| - | 1235094..1235197 | + | 104 | - | - | Toxin Detail |
| H9Q86_RS05915 () | 1235337..1236416 | - | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| H9Q86_RS05920 () | 1236391..1236669 | - | 279 | WP_001575998.1 | excisionase | - |
| H9Q86_RS05925 () | 1237083..1239062 | + | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| H9Q86_RS05930 () | 1239381..1239479 | + | 99 | WP_223151200.1 | hypothetical protein | - |
| H9Q86_RS05935 () | 1239781..1239999 | + | 219 | WP_001524708.1 | hypothetical protein | - |
| H9Q86_RS05940 () | 1240063..1240662 | + | 600 | WP_000940753.1 | DUF1367 family protein | - |
| H9Q86_RS05945 () | 1240746..1240886 | + | 141 | Protein_1159 | recombination protein NinG | - |
| H9Q86_RS05950 () | 1240883..1241019 | + | 137 | Protein_1160 | YlcG family protein | - |
| H9Q86_RS05955 () | 1241016..1241705 | + | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| H9Q86_RS05960 () | 1241799..1242326 | + | 528 | WP_000971762.1 | hypothetical protein | - |
| H9Q86_RS05965 () | 1242700..1243149 | - | 450 | WP_000798708.1 | hypothetical protein | - |
| H9Q86_RS05970 () | 1243510..1244196 | - | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| H9Q86_RS05975 () | 1244472..1244801 | + | 330 | WP_001574216.1 | phage holin, lambda family | - |
| H9Q86_RS05980 () | 1244785..1245237 | + | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| H9Q86_RS05985 () | 1245255..1245734 | + | 480 | WP_001541990.1 | lysis protein | - |
| H9Q86_RS05990 () | 1245942..1246253 | + | 312 | Protein_1168 | DUF1441 family protein | - |
| H9Q86_RS05995 () | 1246333..1246512 | + | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| H9Q86_RS06000 () | 1246629..1247162 | - | 534 | WP_000877926.1 | Cobalt/magnesium transport protein CorA | VF |
| H9Q86_RS06005 () | 1247252..1247947 | + | 696 | WP_001152416.1 | phage minor tail protein L | - |
| H9Q86_RS06010 () | 1247957..1248217 | + | 261 | Protein_1172 | C40 family peptidase | - |
| H9Q86_RS06015 () | 1248217..1250548 | + | 2332 | Protein_1173 | host specificity protein J | - |
| H9Q86_RS06020 () | 1250618..1251451 | + | 834 | WP_077943317.1 | DUF1983 domain-containing protein | - |
| H9Q86_RS06025 () | 1251456..1251800 | + | 345 | Protein_1175 | tail fiber assembly protein | - |
| H9Q86_RS06030 () | 1252002..1252724 | - | 723 | WP_000161704.1 | hypothetical protein | VF |
| H9Q86_RS06035 () | 1252934..1253175 | + | 242 | Protein_1177 | recombinase family protein | - |
| H9Q86_RS06040 () | 1253204..1254004 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| H9Q86_RS06045 () | 1254949..1255871 | - | 923 | Protein_1179 | hypothetical protein ; Integrase | Integrase |
| H9Q86_RS06050 () | 1256135..1256596 | - | 462 | Protein_1180 | DNA breaking-rejoining protein | - |
| H9Q86_RS06055 () | 1256585..1256776 | + | 192 | Protein_1181 | glycoside hydrolase family 19 protein | - |
| H9Q86_RS06060 () | 1256830..1257363 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| H9Q86_RS06065 () | 1257620..1257787 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| H9Q86_RS06070 () | 1257852..1258040 | - | 189 | WP_001576014.1 | hypothetical protein | - |
| H9Q86_RS06075 () | 1258095..1258586 | + | 492 | WP_000348541.1 | DUF1441 family protein | - |
| H9Q86_RS06080 () | 1258573..1259140 | + | 568 | Protein_1186 | phage terminase large subunit family protein | - |
| H9Q86_RS06085 () | 1259139..1260370 | + | 1232 | Protein_1187 | tail fiber protein | - |
| H9Q86_RS06090 () | 1260380..1260667 | + | 288 | Protein_1188 | macro domain-containing protein | - |
| H9Q86_RS06095 () | 1260680..1261191 | + | 512 | Protein_1189 | tail fiber assembly protein | - |
| H9Q86_RS06100 () | 1261288..1261488 | - | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| H9Q86_RS06105 () | 1261878..1262058 | - | 181 | Protein_1191 | IS3 family transposase | - |
| H9Q86_RS06110 () | 1262049..1262150 | + | 102 | Protein_1192 | arsenic transporter | - |
| H9Q86_RS06115 () | 1262759..1262991 | + | 233 | Protein_1193 | helix-turn-helix domain-containing protein | - |
| H9Q86_RS06120 () | 1263318..1263932 | - | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| H9Q86_RS06125 () | 1263942..1264100 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| H9Q86_RS06130 () | 1264233..1265147 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| H9Q86_RS06135 () | 1266397..1266863 | - | 467 | Protein_1197 | tyrosine-type recombinase/integrase | - |
| H9Q86_RS06140 () | 1266933..1268140 | + | 1208 | Protein_1198 | IS256 family transposase ISEc39 | Transposase |
| H9Q86_RS06145 () | 1268286..1268426 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| H9Q86_RS06150 () | 1268592..1268861 | - | 270 | WP_001576019.1 | hypothetical protein | - |
| H9Q86_RS06155 () | 1269234..1269653 | + | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| H9Q86_RS06160 () | 1270026..1270502 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| H9Q86_RS06165 () | 1270832..1271227 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| H9Q86_RS06170 () | 1271911..1272633 | + | 723 | WP_000182071.1 | Prokaryotic ubiquitin-like protein Pup | VF |
| H9Q86_RS06175 () | 1272918..1273082 | + | 165 | WP_001134856.1 | membrane protein | - |
| H9Q86_RS06180 () | 1273306..1273956 | + | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| H9Q86_RS06185 () | 1273975..1274166 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| H9Q86_RS06190 () | 1274277..1274513 | - | 237 | WP_024131108.1 | YebV family protein | - |
| H9Q86_RS06195 () | 1274631..1276070 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| H9Q86_RS06200 () | 1276148..1278781 | - | 2634 | WP_001529852.1 | PqiB family protein | - |
| H9Q86_RS06205 () | 1278750..1280033 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| H9Q86_RS06210 () | 1280162..1280659 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|