MGE detailed information
MGE type: Genomic_island MGE length: 23829 bp
Accession: NZ_CP060201 Location: 893902..917730 Organism: Pseudomonas protegens strain H1F5C Replicon: chromosome
Accession: NZ_CP060201 Location: 893902..917730 Organism: Pseudomonas protegens strain H1F5C Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GGI48_RS04070 () | 889386..890096 | + | 711 | WP_016962591.1 | ABC transporter permease | - |
| GGI48_RS04075 () | 890143..891384 | + | 1242 | WP_179597128.1 | FAD-binding oxidoreductase | - |
| GGI48_RS04080 () | 891476..892201 | + | 726 | WP_179601918.1 | amino acid ABC transporter ATP-binding protein | - |
| GGI48_RS04085 () | 893156..893555 | - | 400 | Protein_816 | hypothetical protein | - |
| GGI48_RS04090 () | 893902..895206 | + | 1305 | WP_179597130.1 | SIR2 family protein | - |
| GGI48_RS04095 () | 895203..896924 | + | 1722 | WP_179597132.1 | ATP-binding protein | - |
| GGI48_RS04100 () | 897338..897784 | + | 447 | WP_179597134.1 | GNAT family N-acetyltransferase | - |
| GGI48_RS04105 () | 897985..898725 | - | 741 | WP_179597136.1 | potassium channel family protein | - |
| GGI48_RS04110 () | 899480..899788 | + | 309 | WP_179597138.1 | hypothetical protein | - |
| GGI48_RS04115 () | 900243..901496 | - | 1254 | WP_179601920.1 | MFS transporter | - |
| GGI48_RS04120 () | 901543..902568 | - | 1026 | WP_179597140.1 | methyltransferase | - |
| GGI48_RS04125 () | 902587..903372 | - | 786 | WP_179597141.1 | HAD-IIB family hydrolase | - |
| GGI48_RS04130 () | 903379..904002 | - | 624 | WP_179597142.1 | DUF1349 domain-containing protein | - |
| GGI48_RS04135 () | 903995..904840 | - | 846 | WP_123392730.1 | SDR family oxidoreductase | - |
| GGI48_RS04140 () | 904937..906649 | - | 1713 | WP_179601922.1 | hypothetical protein | - |
| GGI48_RS04145 () | 906702..907940 | - | 1239 | WP_179597144.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| GGI48_RS04150 () | 907961..908479 | - | 519 | WP_080966932.1 | sugar O-acetyltransferase | - |
| GGI48_RS04155 () | 909015..909589 | + | 575 | Protein_830 | hypothetical protein | - |
| GGI48_RS04160 () | 909743..910261 | + | 519 | WP_179597146.1 | hypothetical protein | - |
| GGI48_RS04165 () | 910347..910553 | + | 207 | Protein_832 | hypothetical protein | - |
| GGI48_RS04170 () | 911146..911328 | + | 183 | WP_041120604.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GGI48_RS04175 () | 911364..911765 | + | 402 | WP_179597148.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GGI48_RS04180 () | 911923..913326 | - | 1404 | WP_179597150.1 | PLP-dependent aminotransferase family protein | - |
| GGI48_RS04185 () | 913414..913860 | + | 447 | WP_179597152.1 | GNAT family N-acetyltransferase | - |
| GGI48_RS04190 () | 913857..914477 | + | 621 | WP_179597154.1 | NAD(P)H-dependent oxidoreductase | - |
| GGI48_RS04195 () | 914505..914936 | + | 432 | WP_179597156.1 | carboxymuconolactone decarboxylase family protein | - |
| GGI48_RS04200 () | 915510..915632 | - | 123 | Protein_839 | PAAR domain-containing protein | - |
| GGI48_RS04205 () | 915686..916117 | - | 432 | WP_179597158.1 | hypothetical protein | - |
| GGI48_RS04210 () | 916310..916774 | - | 465 | WP_179597160.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| GGI48_RS04215 () | 916871..917239 | + | 369 | WP_102880282.1 | antibiotic biosynthesis monooxygenase | - |
| GGI48_RS04220 () | 917272..917730 | + | 459 | WP_179597162.1 | hypothetical protein | - |
| GGI48_RS04225 () | 918632..920257 | - | 1626 | WP_179597164.1 | methyl-accepting chemotaxis protein | - |
| GGI48_RS04230 () | 920769..921125 | + | 357 | WP_179597166.1 | hypothetical protein | - |
| GGI48_RS04235 () | 921174..921353 | + | 180 | WP_179597168.1 | hypothetical protein | - |
| GGI48_RS04240 () | 921466..921969 | + | 504 | WP_179597170.1 | zinc ribbon domain-containing protein | - |
| GGI48_RS04245 () | 922008..922364 | + | 357 | WP_179597172.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|