MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 83647 bp
Accession: NZ_CP059995 Location: 5707956..5791602 Organism: Pseudomonas aeruginosa strain 401853 Replicon: chromosome
Accession: NZ_CP059995 Location: 5707956..5791602 Organism: Pseudomonas aeruginosa strain 401853 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5J27_RS27055 () | 5704077..5707097 | + | 3021 | WP_042170724.1 | filamentous hemagglutinin N-terminal domain-containing protein | - |
| H5J27_RS27060 () | 5708093..5708959 | + | 867 | WP_003120956.1 | ParA family protein | - |
| H5J27_RS27065 () | 5708961..5709698 | + | 738 | WP_023108754.1 | hypothetical protein | - |
| H5J27_RS27070 () | 5709695..5710192 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| H5J27_RS27075 () | 5710198..5710650 | + | 453 | Protein_5358 | hypothetical protein | - |
| H5J27_RS27080 () | 5710711..5711340 | + | 630 | WP_044060901.1 | hypothetical protein | - |
| H5J27_RS27085 () | 5711340..5712041 | + | 702 | WP_023082648.1 | DUF2786 domain-containing protein | - |
| H5J27_RS27090 () | 5712038..5712745 | + | 708 | WP_023082649.1 | HNH endonuclease | - |
| H5J27_RS27095 () | 5712729..5712953 | + | 225 | WP_009315888.1 | hypothetical protein | - |
| H5J27_RS27100 () | 5712950..5714293 | + | 1344 | WP_023082650.1 | replicative DNA helicase | - |
| H5J27_RS27105 () | 5714350..5714970 | + | 621 | WP_127891085.1 | hypothetical protein | - |
| H5J27_RS27110 () | 5715065..5715652 | + | 588 | WP_023093612.1 | hypothetical protein | - |
| H5J27_RS27115 () | 5716783..5717220 | - | 438 | WP_023093613.1 | hypothetical protein | - |
| H5J27_RS27120 () | 5717810..5718235 | - | 426 | WP_031633320.1 | hypothetical protein | - |
| H5J27_RS27125 () | 5718413..5718598 | + | 186 | WP_023102676.1 | hypothetical protein | - |
| H5J27_RS27130 () | 5718588..5719115 | + | 528 | WP_023102677.1 | hypothetical protein | - |
| H5J27_RS27135 () | 5719112..5719369 | + | 258 | WP_023093616.1 | hypothetical protein | - |
| H5J27_RS27140 () | 5719362..5719856 | + | 495 | WP_124128445.1 | hypothetical protein | - |
| H5J27_RS27145 () | 5719849..5720082 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| H5J27_RS27150 () | 5720082..5721104 | + | 1023 | WP_127891086.1 | nucleoid-associated protein YejK | - |
| H5J27_RS27155 () | 5721101..5721991 | + | 891 | WP_003119279.1 | DNA adenine methylase | - |
| H5J27_RS27160 () | 5722012..5722281 | + | 270 | WP_127891087.1 | Arc family DNA-binding protein | - |
| H5J27_RS27165 () | 5722278..5724011 | + | 1734 | WP_031637209.1 | ParB family protein | - |
| H5J27_RS27170 () | 5724039..5724794 | + | 756 | WP_012076849.1 | DUF2857 domain-containing protein | - |
| H5J27_RS27175 () | 5724797..5726122 | + | 1326 | WP_031637207.1 | hypothetical protein | - |
| H5J27_RS27180 () | 5726947..5727522 | + | 576 | WP_127891116.1 | hypothetical protein | - |
| H5J27_RS27185 () | 5727788..5728516 | + | 729 | WP_023082037.1 | TIGR03761 family integrating conjugative element protein | - |
| H5J27_RS27190 () | 5728522..5729070 | + | 549 | WP_034057507.1 | DUF3158 family protein | - |
| H5J27_RS27195 () | 5729118..5729948 | + | 831 | WP_003120975.1 | Rha family transcriptional regulator | - |
| H5J27_RS27200 () | 5729978..5730466 | + | 489 | WP_010792225.1 | single-stranded DNA-binding protein | - |
| H5J27_RS27205 () | 5730574..5730927 | + | 354 | WP_003120979.1 | helix-turn-helix domain-containing protein | - |
| H5J27_RS27210 () | 5731047..5731214 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| H5J27_RS27215 () | 5731329..5733248 | + | 1920 | WP_023082041.1 | type I DNA topoisomerase | - |
| H5J27_RS27220 () | 5733256..5734008 | + | 753 | WP_023082042.1 | hypothetical protein | - |
| H5J27_RS27225 () | 5734309..5736198 | + | 1890 | WP_023101908.1 | hypothetical protein | - |
| H5J27_RS27230 () | 5736195..5738171 | + | 1977 | WP_031691363.1 | DEAD/DEAH box helicase | - |
| H5J27_RS27235 () | 5738310..5738654 | + | 345 | WP_023082045.1 | hypothetical protein | - |
| H5J27_RS27240 () | 5738725..5739015 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| H5J27_RS27245 () | 5739012..5739311 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H5J27_RS27250 () | 5739513..5740637 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| H5J27_RS27255 () | 5740637..5742346 | + | 1710 | WP_012076860.1 | hypothetical protein | VF |
| H5J27_RS27260 () | 5742350..5743675 | + | 1326 | WP_126160157.1 | type 4b pilus protein PilO2 | - |
| H5J27_RS27265 () | 5743665..5744198 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| H5J27_RS27270 () | 5744207..5745787 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| H5J27_RS27275 () | 5745787..5746866 | + | 1080 | WP_023093858.1 | hypothetical protein | VF |
| H5J27_RS27280 () | 5746888..5747418 | + | 531 | WP_023093859.1 | hypothetical protein | VF |
| H5J27_RS27285 () | 5747415..5748371 | + | 957 | WP_023093675.1 | Flp pilus assembly complex ATPase component TadA | - |
| H5J27_RS27290 () | 5748364..5749743 | + | 1380 | WP_023093860.1 | hypothetical protein | VF |
| H5J27_RS27295 () | 5749761..5750198 | + | 438 | WP_023093861.1 | hypothetical protein | VF |
| H5J27_RS27300 () | 5751197..5752183 | + | 987 | WP_003099775.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| H5J27_RS27305 () | 5752496..5753062 | + | 567 | WP_003099777.1 | hypothetical protein | - |
| H5J27_RS27310 () | 5753139..5753318 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| H5J27_RS27315 () | 5753777..5754265 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| H5J27_RS27320 () | 5754403..5754561 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| H5J27_RS27325 () | 5754635..5754832 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| H5J27_RS27330 () | 5755024..5755737 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| H5J27_RS27335 () | 5755973..5756323 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| H5J27_RS27340 () | 5756380..5757012 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| H5J27_RS27345 () | 5757009..5757284 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| H5J27_RS27350 () | 5757354..5757716 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| H5J27_RS27355 () | 5757784..5758044 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| H5J27_RS27360 () | 5758137..5758742 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| H5J27_RS27365 () | 5758772..5760217 | + | 1446 | WP_003125297.1 | class I SAM-dependent methyltransferase | - |
| H5J27_RS27370 () | 5760322..5762571 | + | 2250 | WP_114012966.1 | DEAD/DEAH box helicase | - |
| H5J27_RS27375 () | 5762892..5763146 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| H5J27_RS27380 () | 5763787..5763984 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| H5J27_RS27385 () | 5764202..5764894 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| H5J27_RS27390 () | 5764905..5765657 | + | 753 | WP_058007452.1 | TIGR03759 family integrating conjugative element protein | - |
| H5J27_RS27395 () | 5765642..5766223 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| H5J27_RS27400 () | 5766220..5766720 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| H5J27_RS27405 () | 5766792..5766998 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| H5J27_RS27410 () | 5767002..5769233 | + | 2232 | WP_023082676.1 | type IV conjugative transfer system coupling protein TraD | - |
| H5J27_RS27415 () | 5769233..5769979 | + | 747 | WP_009316301.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| H5J27_RS27420 () | 5769997..5770488 | + | 492 | WP_023980742.1 | hypothetical protein | - |
| H5J27_RS27425 () | 5770729..5772210 | + | 1482 | WP_126869412.1 | UvrD-helicase domain-containing protein | - |
| H5J27_RS27430 () | 5772319..5772624 | + | 306 | WP_003141510.1 | hypothetical protein | - |
| H5J27_RS27435 () | 5772718..5773056 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| H5J27_RS27440 () | 5773053..5773292 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| H5J27_RS27445 () | 5773310..5773666 | + | 357 | WP_049243255.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| H5J27_RS27450 () | 5773677..5774063 | + | 387 | WP_003134190.1 | TIGR03750 family conjugal transfer protein | - |
| H5J27_RS27455 () | 5774060..5774719 | + | 660 | WP_003086164.1 | TIGR03746 family integrating conjugative element protein | - |
| H5J27_RS27460 () | 5774716..5775600 | + | 885 | WP_127891088.1 | TIGR03749 family integrating conjugative element protein | - |
| H5J27_RS27465 () | 5775584..5777089 | + | 1506 | WP_127891089.1 | TIGR03752 family integrating conjugative element protein | - |
| H5J27_RS27470 () | 5777067..5777510 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| H5J27_RS27475 () | 5777510..5780452 | + | 2943 | WP_025981583.1 | conjugative transfer ATPase | - |
| H5J27_RS27480 () | 5780449..5780733 | + | 285 | WP_019726875.1 | hypothetical protein | - |
| H5J27_RS27485 () | 5780730..5781389 | + | 660 | WP_182835631.1 | DsbA family protein | - |
| H5J27_RS27490 () | 5781386..5781604 | - | 219 | WP_043153134.1 | hypothetical protein | - |
| H5J27_RS27495 () | 5781813..5782244 | + | 432 | WP_079457541.1 | TIGR03757 family integrating conjugative element protein | - |
| H5J27_RS27500 () | 5782244..5783182 | + | 939 | WP_127891092.1 | TIGR03756 family integrating conjugative element protein | - |
| H5J27_RS27505 () | 5783200..5784582 | + | 1383 | WP_116829785.1 | integrating conjugative element protein | - |
| H5J27_RS27510 () | 5784582..5784938 | + | 357 | WP_023110950.1 | hypothetical protein | - |
| H5J27_RS27515 () | 5784935..5786479 | + | 1545 | WP_023110951.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| H5J27_RS27520 () | 5786514..5786864 | - | 351 | WP_023110952.1 | DUF3742 family protein | - |
| H5J27_RS27525 () | 5786983..5787255 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| H5J27_RS27530 () | 5787259..5787609 | + | 351 | WP_003117088.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H5J27_RS27535 () | 5787938..5789857 | + | 1920 | WP_023110953.1 | helicase/relaxase domain-containing protein | - |
| H5J27_RS27540 () | 5789854..5791203 | + | 1350 | WP_012076887.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| H5J27_RS27560 () | 5792028..5794592 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| H5J27_RS27565 () | 5794749..5795477 | - | 729 | WP_033972914.1 | peptidoglycan editing factor PgeF | - |
| H5J27_RS27570 () | 5795474..5796436 | - | 963 | WP_033972915.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|