MGE detailed information
MGE type: Mobilizable plasmid MGE length: 160336 bp
Accession: NZ_CP059088 Location: 1..160336 Organism: Pantoea agglomerans strain AR1a Replicon: plasmid pAR1aB
Accession: NZ_CP059088 Location: 1..160336 Organism: Pantoea agglomerans strain AR1a Replicon: plasmid pAR1aB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
H0Z11_RS00460 (H0Z11_00460) | 1..1074 | + | 1074 | WP_115764271.1 | RepB family plasmid replication initiator protein | - |
H0Z11_RS00465 (H0Z11_00465) | 2414..3601 | - | 1188 | WP_207874156.1 | diguanylate phosphodiesterase | - |
H0Z11_RS00470 (H0Z11_00470) | 3853..4062 | - | 210 | WP_031593096.1 | DUF1471 domain-containing protein | - |
H0Z11_RS00475 (H0Z11_00475) | 4263..6047 | - | 1785 | WP_207874159.1 | GGDEF and EAL domain-containing protein | - |
H0Z11_RS00480 (H0Z11_00480) | 6567..6791 | - | 225 | WP_115764269.1 | DUF3606 domain-containing protein | - |
H0Z11_RS00485 (H0Z11_00485) | 7161..7400 | + | 240 | WP_022624236.1 | hypothetical protein | - |
H0Z11_RS00490 (H0Z11_00490) | 7575..8063 | + | 489 | WP_039387365.1 | Hsp20 family protein | - |
H0Z11_RS00495 (H0Z11_00495) | 8137..8901 | - | 765 | WP_207874161.1 | MerR family transcriptional regulator | - |
H0Z11_RS00500 (H0Z11_00500) | 9097..9306 | - | 210 | WP_010256969.1 | CsbD family protein | - |
H0Z11_RS00505 (H0Z11_00505) | 9466..10695 | - | 1230 | WP_207874163.1 | diguanylate phosphodiesterase | - |
H0Z11_RS23630 | 11652..11885 | + | 234 | WP_241866615.1 | DNA polymerase V subunit | - |
H0Z11_RS00510 (H0Z11_00510) | 11961..12290 | - | 330 | WP_207874165.1 | hypothetical protein | - |
H0Z11_RS00515 (H0Z11_00515) | 12929..14587 | + | 1659 | WP_143790112.1 | Methyl-accepting chemotaxis protein I | VF |
H0Z11_RS00520 (H0Z11_00520) | 15191..17116 | + | 1926 | WP_207874167.1 | Methyl-accepting chemotaxis protein I | VF |
H0Z11_RS00525 (H0Z11_00525) | 17172..17972 | - | 801 | WP_207874169.1 | MBL fold metallo-hydrolase | - |
H0Z11_RS00530 (H0Z11_00530) | 18050..19165 | - | 1116 | WP_207874171.1 | metallophosphoesterase | - |
H0Z11_RS00535 (H0Z11_00535) | 19403..21730 | - | 2328 | WP_207874173.1 | FdhF/YdeP family oxidoreductase | - |
H0Z11_RS00540 (H0Z11_00540) | 22299..22706 | - | 408 | WP_137229086.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
H0Z11_RS00545 (H0Z11_00545) | 22777..22950 | - | 174 | WP_137229084.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
H0Z11_RS00550 (H0Z11_00550) | 23580..23927 | - | 348 | WP_003850685.1 | HNH nuclease YajD | - |
H0Z11_RS00555 (H0Z11_00555) | 24048..24329 | - | 282 | WP_205317936.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
H0Z11_RS00560 (H0Z11_00560) | 24319..24639 | - | 321 | WP_207874175.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
H0Z11_RS00565 (H0Z11_00565) | 24963..25130 | - | 168 | WP_009093121.1 | hypothetical protein | - |
H0Z11_RS00570 (H0Z11_00570) | 25421..28525 | + | 3105 | WP_207874177.1 | Multidrug resistance protein MexB | VF |
H0Z11_RS00575 (H0Z11_00575) | 28585..29610 | - | 1026 | WP_207874179.1 | alpha/beta hydrolase | - |
H0Z11_RS00580 (H0Z11_00580) | 29679..30803 | - | 1125 | WP_241866617.1 | MFS transporter | - |
H0Z11_RS00585 (H0Z11_00585) | 31006..31905 | + | 900 | WP_031593077.1 | HTH-type transcriptional regulator PgrR | VF |
H0Z11_RS00590 (H0Z11_00590) | 31966..32142 | - | 177 | WP_010257023.1 | KGG domain-containing protein | - |
H0Z11_RS00595 (H0Z11_00595) | 32344..32640 | + | 297 | WP_207874183.1 | hypothetical protein | - |
H0Z11_RS00600 (H0Z11_00600) | 32685..32972 | - | 288 | WP_115764660.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
H0Z11_RS00605 (H0Z11_00605) | 32972..33211 | - | 240 | WP_083070603.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
H0Z11_RS00610 (H0Z11_00610) | 33552..35525 | + | 1974 | Protein_31 | methyl-accepting chemotaxis protein | - |
H0Z11_RS00615 (H0Z11_00615) | 35630..36646 | + | 1017 | WP_039387390.1 | NAD(P)-dependent alcohol dehydrogenase | - |
H0Z11_RS00620 (H0Z11_00620) | 36696..37364 | - | 669 | WP_241866616.1 | DUF2268 domain-containing putative Zn-dependent protease | - |
H0Z11_RS00625 (H0Z11_00625) | 37715..38494 | + | 780 | WP_207874185.1 | MBL fold metallo-hydrolase | - |
H0Z11_RS00630 (H0Z11_00630) | 38568..39560 | + | 993 | WP_115764656.1 | HTH-type transcriptional regulator CdhR | VF |
H0Z11_RS00635 (H0Z11_00635) | 39652..40053 | - | 402 | WP_207874187.1 | H-NS family nucleoid-associated regulatory protein | - |
H0Z11_RS00640 (H0Z11_00640) | 40329..41891 | + | 1563 | WP_207874189.1 | Phytochrome-like protein cph2 | VF |
H0Z11_RS00645 (H0Z11_00645) | 41960..42397 | + | 438 | WP_207874191.1 | VOC family protein | - |
H0Z11_RS00650 (H0Z11_00650) | 42634..43035 | - | 402 | WP_010257055.1 | H-NS family nucleoid-associated regulatory protein | - |
H0Z11_RS00655 (H0Z11_00655) | 44209..44388 | + | 180 | WP_115764651.1 | DUF2256 domain-containing protein | - |
H0Z11_RS00660 (H0Z11_00660) | 44441..44743 | - | 303 | WP_115764650.1 | hypothetical protein | - |
H0Z11_RS00665 (H0Z11_00665) | 44856..45398 | - | 543 | WP_207874192.1 | YfaZ family outer membrane protein | - |
H0Z11_RS00670 (H0Z11_00670) | 45461..45697 | - | 237 | WP_031593778.1 | YgdI/YgdR family lipoprotein | - |
H0Z11_RS00675 (H0Z11_00675) | 46066..46491 | + | 426 | WP_115764648.1 | DUF1090 family protein | - |
H0Z11_RS00680 (H0Z11_00680) | 47167..47547 | + | 381 | WP_115764647.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
H0Z11_RS00685 (H0Z11_00685) | 47991..48461 | - | 471 | WP_207874193.1 | WbuC family cupin fold metalloprotein | - |
H0Z11_RS00690 (H0Z11_00690) | 48800..49024 | + | 225 | WP_031593784.1 | FeoA domain-containing protein | - |
H0Z11_RS00695 (H0Z11_00695) | 49024..51351 | + | 2328 | WP_207874195.1 | Fe(2+) transporter FeoB | VF |
H0Z11_RS00700 (H0Z11_00700) | 51786..52823 | - | 1038 | WP_109653747.1 | tyrosine-type recombinase/integrase | - |
H0Z11_RS00705 (H0Z11_00705) | 53771..54241 | + | 471 | WP_207874197.1 | SgcJ/EcaC family oxidoreductase | - |
H0Z11_RS00710 (H0Z11_00710) | 54541..55758 | - | 1218 | WP_207874199.1 | monooxygenase | - |
H0Z11_RS00715 (H0Z11_00715) | 55751..57211 | - | 1461 | WP_031593795.1 | MFS transporter | - |
H0Z11_RS00720 (H0Z11_00720) | 57571..58980 | - | 1410 | WP_207874201.1 | LLM class flavin-dependent oxidoreductase | - |
H0Z11_RS00725 (H0Z11_00725) | 59049..60461 | - | 1413 | WP_207874203.1 | FAD-dependent oxidoreductase | - |
H0Z11_RS00730 (H0Z11_00730) | 60481..61653 | - | 1173 | WP_207874205.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
H0Z11_RS00735 (H0Z11_00735) | 61928..63817 | + | 1890 | WP_207874207.1 | Transcriptional regulatory protein ZraR | VF |
H0Z11_RS00740 (H0Z11_00740) | 63913..64863 | + | 951 | WP_207874209.1 | sulfonate ABC transporter substrate-binding protein | - |
H0Z11_RS00745 (H0Z11_00745) | 65156..66289 | + | 1134 | WP_083070622.1 | glutathione-independent formaldehyde dehydrogenase | - |
H0Z11_RS00750 (H0Z11_00750) | 66578..66829 | + | 252 | WP_039387444.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
H0Z11_RS00755 (H0Z11_00755) | 66826..67113 | + | 288 | WP_010257115.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
H0Z11_RS00760 (H0Z11_00760) | 67265..67495 | + | 231 | Protein_61 | ISNCY family transposase ISKpn21 | Transposase |
H0Z11_RS00765 (H0Z11_00765) | 67515..67799 | + | 285 | Protein_62 | IS3 family transposase | - |
H0Z11_RS00770 (H0Z11_00770) | 67896..68816 | - | 921 | WP_069027204.1 | Recombination-promoting nuclease RpnA | VF |
H0Z11_RS00775 (H0Z11_00775) | 69175..69984 | - | 810 | WP_172607963.1 | restriction endonuclease | - |
H0Z11_RS00780 (H0Z11_00780) | 70536..70715 | + | 180 | Protein_65 | XRE family transcriptional regulator | - |
H0Z11_RS00785 (H0Z11_00785) | 70996..71691 | + | 696 | WP_115758304.1 | haloacid dehalogenase type II | - |
H0Z11_RS00790 (H0Z11_00790) | 71796..72161 | - | 366 | WP_137229020.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF | - |
H0Z11_RS00795 (H0Z11_00795) | 72158..72478 | - | 321 | WP_022624286.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE | - |
H0Z11_RS00800 (H0Z11_00800) | 72478..74145 | - | 1668 | WP_207874211.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
H0Z11_RS00805 (H0Z11_00805) | 74145..75047 | - | 903 | WP_115765116.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
H0Z11_RS00810 (H0Z11_00810) | 75047..77026 | - | 1980 | WP_207874212.1 | Bifunctional polymyxin resistance protein ArnA | VF |
H0Z11_RS00815 (H0Z11_00815) | 77023..78006 | - | 984 | WP_115765118.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
H0Z11_RS00820 (H0Z11_00820) | 78008..79144 | - | 1137 | WP_207874214.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
H0Z11_RS00825 (H0Z11_00825) | 79841..80419 | + | 579 | WP_115765127.1 | YceI family protein | - |
H0Z11_RS00830 (H0Z11_00830) | 80446..80728 | - | 283 | Protein_75 | hypothetical protein | - |
H0Z11_RS00835 (H0Z11_00835) | 80935..81948 | - | 1014 | WP_207874072.1 | Gfo/Idh/MocA family oxidoreductase | - |
H0Z11_RS00840 (H0Z11_00840) | 82057..83067 | + | 1011 | WP_207874074.1 | LacI family DNA-binding transcriptional regulator | - |
H0Z11_RS00845 (H0Z11_00845) | 83557..84006 | + | 450 | WP_207874076.1 | PACE efflux transporter | - |
H0Z11_RS23825 (H0Z11_00850) | 84244..84447 | + | 204 | WP_207874078.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
H0Z11_RS00855 (H0Z11_00855) | 84627..88559 | - | 3933 | WP_277884045.1 | Hemoglobin-binding protease hbp autotransporter | VF |
H0Z11_RS00860 (H0Z11_00860) | 89337..90209 | - | 873 | WP_207874082.1 | hypothetical protein | - |
H0Z11_RS00865 (H0Z11_00865) | 90209..90745 | - | 537 | WP_207874084.1 | putative fimbrial-like protein YfcP | VF |
H0Z11_RS00870 (H0Z11_00870) | 90755..91186 | - | 432 | WP_207874086.1 | fimbrial protein | - |
H0Z11_RS00875 (H0Z11_00875) | 91497..92210 | - | 714 | WP_207874217.1 | Chaperone protein PapD | VF |
H0Z11_RS00880 (H0Z11_00880) | 92389..94926 | - | 2538 | WP_207874088.1 | Outer membrane usher protein PapC | VF |
H0Z11_RS00885 (H0Z11_00885) | 95200..95748 | - | 549 | WP_207874090.1 | Fimbria A protein | VF |
H0Z11_RS00890 (H0Z11_00890) | 96356..96642 | - | 287 | Protein_87 | transposase | - |
H0Z11_RS00895 (H0Z11_00895) | 96643..97096 | - | 454 | Protein_88 | helix-turn-helix domain-containing protein | - |
H0Z11_RS00900 (H0Z11_00900) | 97431..98066 | - | 636 | WP_207874092.1 | LuxR family transcriptional regulator | - |
H0Z11_RS00905 (H0Z11_00905) | 98104..98694 | - | 591 | WP_115765267.1 | helix-turn-helix domain-containing protein | - |
H0Z11_RS00910 (H0Z11_00910) | 99783..100001 | + | 219 | WP_241866613.1 | hypothetical protein | - |
H0Z11_RS00915 (H0Z11_00915) | 100327..100824 | - | 498 | WP_115764953.1 | FidL-like protein | - |
H0Z11_RS00920 (H0Z11_00920) | 100821..101738 | - | 918 | WP_241866614.1 | winged helix-turn-helix domain-containing protein | - |
H0Z11_RS00925 (H0Z11_00925) | 102062..102676 | + | 615 | WP_207874094.1 | Fatty acid metabolism regulator protein | VF |
H0Z11_RS00930 (H0Z11_00930) | 102914..104197 | + | 1284 | WP_207874096.1 | beta-ketoacyl-ACP synthase II | - |
H0Z11_RS00935 (H0Z11_00935) | 104438..105322 | + | 885 | WP_207874098.1 | ROK family protein | - |
H0Z11_RS00940 (H0Z11_00940) | 105335..106288 | - | 954 | WP_069027173.1 | LacI family DNA-binding transcriptional regulator | - |
H0Z11_RS00945 (H0Z11_00945) | 106577..106906 | + | 330 | WP_031594544.1 | PTS sugar transporter subunit IIB | - |
H0Z11_RS00950 (H0Z11_00950) | 106903..108231 | + | 1329 | WP_207874100.1 | PTS sugar transporter subunit IIC | - |
H0Z11_RS00955 (H0Z11_00955) | 108252..109652 | + | 1401 | WP_207874102.1 | glycoside hydrolase family 1 protein | - |
H0Z11_RS00960 (H0Z11_00960) | 109649..109963 | + | 315 | WP_039387287.1 | PTS lactose/cellobiose transporter subunit IIA | - |
H0Z11_RS00965 (H0Z11_00965) | 110170..110958 | - | 789 | WP_207874104.1 | MipA/OmpV family protein | - |
H0Z11_RS00970 (H0Z11_00970) | 111088..111786 | + | 699 | WP_083070645.1 | Response regulator ArlR | VF |
H0Z11_RS00975 (H0Z11_00975) | 111783..112952 | + | 1170 | WP_031594551.1 | ATP-binding protein | - |
H0Z11_RS00980 (H0Z11_00980) | 113046..114179 | + | 1134 | WP_207874106.1 | efflux RND transporter periplasmic adaptor subunit | - |
H0Z11_RS00985 (H0Z11_00985) | 114176..117220 | + | 3045 | WP_207874108.1 | efflux RND transporter permease subunit | - |
H0Z11_RS00990 (H0Z11_00990) | 117271..117516 | - | 246 | WP_010256845.1 | hypothetical protein | - |
H0Z11_RS00995 (H0Z11_00995) | 117588..118493 | - | 906 | WP_207874109.1 | LysR family transcriptional regulator | - |
H0Z11_RS01000 (H0Z11_01000) | 118598..119380 | + | 783 | WP_033781025.1 | acetolactate decarboxylase | - |
H0Z11_RS01005 (H0Z11_01005) | 119395..121074 | + | 1680 | WP_207874110.1 | acetolactate synthase AlsS | - |
H0Z11_RS01010 (H0Z11_01010) | 121096..121869 | + | 774 | WP_207874221.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
H0Z11_RS01015 (H0Z11_01015) | 122075..123526 | + | 1452 | WP_207874112.1 | Flagellin | VF |
H0Z11_RS01020 (H0Z11_01020) | 123865..125178 | + | 1314 | WP_207874114.1 | CitMHS family transporter | - |
H0Z11_RS01025 (H0Z11_01025) | 125346..126185 | + | 840 | WP_039387306.1 | MBL fold metallo-hydrolase | - |
H0Z11_RS01030 (H0Z11_01030) | 126237..126551 | - | 315 | WP_039387307.1 | HigA family addiction module antitoxin | - |
H0Z11_RS01035 (H0Z11_01035) | 126551..126832 | - | 282 | WP_207874116.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
H0Z11_RS01040 (H0Z11_01040) | 126987..127238 | + | 252 | WP_207874118.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
H0Z11_RS01045 (H0Z11_01045) | 127409..129946 | - | 2538 | WP_207874120.1 | UvrABC system protein A | VF |
H0Z11_RS01050 (H0Z11_01050) | 130673..131056 | - | 384 | WP_064703094.1 | hypothetical protein | - |
H0Z11_RS01055 (H0Z11_01055) | 131056..131355 | - | 300 | WP_207874122.1 | type II toxin-antitoxin system HigB family toxin | - |
H0Z11_RS01060 (H0Z11_01060) | 131588..133066 | - | 1479 | WP_207874124.1 | YsnF/AvaK domain-containing protein | - |
H0Z11_RS01065 (H0Z11_01065) | 133353..133922 | - | 570 | WP_207874126.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
H0Z11_RS01070 (H0Z11_01070) | 134183..134767 | + | 585 | WP_207874128.1 | GNAT family protein | - |
H0Z11_RS01075 (H0Z11_01075) | 134815..136953 | - | 2139 | WP_115764286.1 | EAL domain-containing protein | - |
H0Z11_RS01080 (H0Z11_01080) | 137359..137598 | - | 240 | WP_207874130.1 | transcriptional regulator | - |
H0Z11_RS01085 (H0Z11_01085) | 137960..139393 | - | 1434 | WP_207874131.1 | Methyl-accepting chemotaxis protein II | VF |
H0Z11_RS01090 (H0Z11_01090) | 139740..141521 | + | 1782 | WP_207874133.1 | sensor domain-containing phosphodiesterase | - |
H0Z11_RS01095 (H0Z11_01095) | 141542..143125 | - | 1584 | WP_207874135.1 | sensor domain-containing diguanylate cyclase | - |
H0Z11_RS01100 (H0Z11_01100) | 143203..143385 | - | 183 | WP_207874137.1 | hypothetical protein | - |
H0Z11_RS01105 (H0Z11_01105) | 143528..143701 | - | 174 | WP_207874139.1 | hypothetical protein | - |
H0Z11_RS01110 (H0Z11_01110) | 144220..145131 | + | 912 | WP_207874141.1 | N-acetyltransferase | - |
H0Z11_RS01115 (H0Z11_01115) | 145133..145378 | - | 246 | WP_115764278.1 | hypothetical protein | - |
H0Z11_RS01120 (H0Z11_01120) | 145598..146131 | + | 534 | WP_207874143.1 | SRPBCC family protein | - |
H0Z11_RS01125 (H0Z11_01125) | 146132..147298 | + | 1167 | WP_207874145.1 | zinc-dependent alcohol dehydrogenase | - |
H0Z11_RS01130 (H0Z11_01130) | 147636..148181 | + | 546 | WP_031593108.1 | chorismate mutase | - |
H0Z11_RS01135 (H0Z11_01135) | 148204..149394 | + | 1191 | WP_207874147.1 | cytochrome P450 | - |
H0Z11_RS01140 (H0Z11_01140) | 149430..150434 | - | 1005 | WP_039387344.1 | LacI family DNA-binding transcriptional regulator | - |
H0Z11_RS01145 (H0Z11_01145) | 150464..151873 | - | 1410 | WP_115764274.1 | sucrose-6-phosphate hydrolase | - |
H0Z11_RS01150 (H0Z11_01150) | 151873..153243 | - | 1371 | WP_010256928.1 | sucrose-specific PTS transporter subunit IIBC | - |
H0Z11_RS01155 (H0Z11_01155) | 153311..154846 | - | 1536 | WP_207874149.1 | carbohydrate porin | - |
H0Z11_RS01160 (H0Z11_01160) | 155004..155930 | - | 927 | WP_207874151.1 | aminoimidazole riboside kinase | - |
H0Z11_RS01165 (H0Z11_01165) | 156150..157121 | - | 972 | WP_207874153.1 | ParB family protein | - |
H0Z11_RS01170 (H0Z11_01170) | 157118..158320 | - | 1203 | WP_010256940.1 | Plasmid partition protein A | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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