MGE detailed information
MGE type: Prophage MGE length: 56652 bp
Accession: NZ_CP058656 Location: 1948777..2005428 Organism: Escherichia coli strain WCHEC035125 Replicon: chromosome
Accession: NZ_CP058656 Location: 1948777..2005428 Organism: Escherichia coli strain WCHEC035125 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZR25_RS09265 () | 1943983..1946412 | + | 2430 | WP_000176795.1 | trimethylamine N-oxide reductase TorZ | - |
| HZR25_RS09270 () | 1946577..1947548 | - | 972 | WP_000564750.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| HZR25_RS09275 () | 1947545..1948288 | - | 744 | WP_000019585.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| HZR25_RS09280 () | 1948329..1948724 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| HZR25_RS09285 () | 1948777..1949556 | - | 780 | WP_046659708.1 | DUF72 domain-containing protein | - |
| HZR25_RS09290 () | 1949553..1950812 | - | 1260 | WP_046659706.1 | site-specific integrase | - |
| HZR25_RS09295 () | 1950855..1951100 | - | 246 | WP_016244760.1 | excisionase family protein | - |
| HZR25_RS09300 () | 1951260..1951478 | - | 219 | WP_046659703.1 | TraR/DksA C4-type zinc finger protein | - |
| HZR25_RS09305 () | 1951475..1951675 | - | 201 | WP_046659701.1 | hypothetical protein | - |
| HZR25_RS09310 () | 1951830..1952033 | + | 204 | WP_086625037.1 | DUF4752 family protein | - |
| HZR25_RS09315 () | 1952140..1952523 | + | 384 | WP_086625036.1 | hypothetical protein | - |
| HZR25_RS09320 () | 1952523..1952717 | + | 195 | WP_046659679.1 | hypothetical protein | - |
| HZR25_RS09325 () | 1952916..1953113 | + | 198 | WP_025269967.1 | hypothetical protein | - |
| HZR25_RS09330 () | 1953150..1953332 | + | 183 | WP_025269966.1 | hypothetical protein | - |
| HZR25_RS09335 () | 1953329..1953592 | + | 264 | WP_025269997.1 | DNA polymerase III subunit theta | - |
| HZR25_RS09340 () | 1953699..1954295 | + | 597 | WP_046659672.1 | DUF1367 family protein | - |
| HZR25_RS09345 () | 1954504..1954794 | + | 291 | WP_024194779.1 | DUF1364 domain-containing protein | - |
| HZR25_RS09350 () | 1954791..1955153 | + | 363 | WP_029363688.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HZR25_RS09355 () | 1955150..1955290 | + | 141 | WP_001548467.1 | YlcG family protein | - |
| HZR25_RS09360 () | 1955287..1955976 | + | 690 | WP_046659669.1 | antiterminator | - |
| HZR25_RS09370 () | 1956432..1956731 | + | 300 | WP_122633140.1 | phage holin family protein | - |
| HZR25_RS09375 () | 1956728..1957267 | + | 540 | WP_046659668.1 | glycoside hydrolase family 108 protein | - |
| HZR25_RS09380 () | 1957264..1957611 | + | 348 | WP_032412824.1 | hypothetical protein | - |
| HZR25_RS09385 () | 1957608..1957883 | + | 276 | WP_046659666.1 | hypothetical protein | - |
| HZR25_RS09390 () | 1957834..1958031 | + | 198 | WP_046659665.1 | hypothetical protein | - |
| HZR25_RS09395 () | 1958129..1958437 | + | 309 | WP_024623185.1 | hypothetical protein | - |
| HZR25_RS09400 () | 1958434..1958700 | + | 267 | WP_046659662.1 | hypothetical protein | - |
| HZR25_RS09405 () | 1958870..1959298 | + | 429 | WP_046659660.1 | hypothetical protein | - |
| HZR25_RS09410 () | 1959645..1960133 | + | 489 | WP_004218030.1 | hypothetical protein | - |
| HZR25_RS09415 () | 1960084..1961484 | + | 1401 | WP_046659658.1 | PBSX family phage terminase large subunit | - |
| HZR25_RS09420 () | 1961707..1963158 | + | 1452 | WP_001085714.1 | DUF1073 domain-containing protein | - |
| HZR25_RS09425 () | 1963214..1963762 | + | 549 | WP_000233062.1 | hypothetical protein | - |
| HZR25_RS09430 () | 1963794..1964216 | + | 423 | WP_046659655.1 | hypothetical protein | - |
| HZR25_RS09435 () | 1964272..1965474 | + | 1203 | WP_046659652.1 | DUF2213 domain-containing protein | - |
| HZR25_RS09440 () | 1965478..1965972 | + | 495 | WP_000528476.1 | hypothetical protein | - |
| HZR25_RS09445 () | 1965984..1966925 | + | 942 | WP_020804064.1 | DUF2184 domain-containing protein | - |
| HZR25_RS09450 () | 1966965..1967246 | + | 282 | WP_000725700.1 | hypothetical protein | - |
| HZR25_RS09455 () | 1967215..1967634 | + | 420 | WP_046659650.1 | DUF4054 domain-containing protein | - |
| HZR25_RS09460 () | 1967631..1968137 | + | 507 | WP_025269952.1 | hypothetical protein | - |
| HZR25_RS09465 () | 1968137..1968523 | + | 387 | WP_023312779.1 | hypothetical protein | - |
| HZR25_RS09470 () | 1968618..1969058 | + | 441 | WP_004152176.1 | hypothetical protein | - |
| HZR25_RS09475 () | 1969212..1969952 | + | 741 | WP_162403646.1 | DUF2612 domain-containing protein | - |
| HZR25_RS09480 () | 1969952..1970833 | + | 882 | WP_025270001.1 | hypothetical protein | - |
| HZR25_RS09485 () | 1970833..1971003 | + | 171 | WP_164686900.1 | hypothetical protein | - |
| HZR25_RS09490 () | 1971085..1973169 | + | 2085 | WP_126875314.1 | hypothetical protein | - |
| HZR25_RS09495 () | 1973178..1973357 | + | 180 | WP_025270003.1 | hypothetical protein | - |
| HZR25_RS09500 () | 1973471..1973788 | + | 318 | WP_025270004.1 | hypothetical protein | - |
| HZR25_RS09505 () | 1974053..1974619 | - | 567 | WP_000891620.1 | hydrolase | - |
| HZR25_RS09510 () | 1974929..1976701 | + | 1773 | WP_001258677.1 | aspartate--tRNA ligase | - |
| HZR25_RS09515 () | 1976819..1977271 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| HZR25_RS09520 () | 1977300..1978040 | + | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HZR25_RS09525 () | 1978075..1978596 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HZR25_RS09530 () | 1978598..1979200 | - | 603 | WP_046659996.1 | YebB family permuted papain-like enzyme | - |
| HZR25_RS09535 () | 1979271..1979336 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| HZR25_RS09540 () | 1979475..1980086 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| HZR25_RS09545 () | 1980095..1981105 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HZR25_RS09550 () | 1981446..1982231 | - | 786 | WP_000571479.1 | zinc ABC transporter permease subunit ZnuB | - |
| HZR25_RS09555 () | 1982228..1982983 | - | 756 | WP_000202990.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| HZR25_RS09560 () | 1983062..1983994 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HZR25_RS09565 () | 1984010..1985332 | + | 1323 | WP_046659999.1 | murein DD-endopeptidase MepM | - |
| HZR25_RS09570 () | 1985452..1986423 | + | 972 | WP_000448381.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| HZR25_RS09575 () | 1986554..1987996 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| HZR25_RS09580 () | 1988124..1988993 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| HZR25_RS09585 () | 1989331..1990806 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| HZR25_RS09590 () | 1991041..1992852 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| HZR25_RS09595 () | 1992889..1993530 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HZR25_RS09600 () | 1993586..1994764 | - | 1179 | WP_000173475.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HZR25_RS09605 () | 1994898..1995188 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| HZR25_RS09610 () | 1995255..1995611 | + | 357 | WP_001295500.1 | protein YebF | - |
| HZR25_RS09615 () | 1995938..1996597 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| HZR25_RS09620 () | 1996806..1998866 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| HZR25_RS09625 () | 1998863..1999525 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| HZR25_RS09630 () | 1999549..2000205 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| HZR25_RS09635 () | 2000307..2000537 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HZR25_RS09640 () | 2000676..2001050 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| HZR25_RS09645 () | 2001054..2001926 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| HZR25_RS09650 () | 2001939..2002280 | + | 342 | WP_000976492.1 | YebY family protein | - |
| - () | 2002308..2002579 | - | 272 | - | - | Antitoxin Detail |
| - () | 2002438..2002541 | + | 104 | - | - | Toxin Detail |
| HZR25_RS09655 () | 2002676..2003332 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| HZR25_RS09660 () | 2003333..2003524 | - | 192 | WP_001296140.1 | YebW family protein | - |
| HZR25_RS09665 () | 2003629..2003865 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| HZR25_RS09670 () | 2003983..2005422 | - | 1440 | WP_000057023.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HZR25_RS09675 () | 2005502..2008135 | - | 2634 | WP_001356288.1 | lipid-binding membrane homeostasis protein YebT | - |
| HZR25_RS09680 () | 2008104..2009387 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| HZR25_RS09685 () | 2009517..2010014 | + | 498 | WP_001373833.1 | L-methionine (R)-S-oxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|