MGE detailed information
MGE type: Prophage MGE length: 39898 bp
Accession: NZ_CP058574 Location: 2123120..2163017 Organism: Escherichia coli strain EC1 Replicon: chromosome
Accession: NZ_CP058574 Location: 2123120..2163017 Organism: Escherichia coli strain EC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYH05_RS10105 () | 2119844..2120296 | + | 453 | WP_076611058.1 | dihydroneopterin triphosphate diphosphatase | - |
| HYH05_RS10110 () | 2120325..2121065 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HYH05_RS10115 () | 2121100..2121621 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HYH05_RS10120 () | 2121623..2122225 | - | 603 | WP_001024936.1 | YebB family permuted papain-like enzyme | - |
| HYH05_RS10125 () | 2122296..2122361 | + | 66 | WP_072123646.1 | stress response small protein YobI | - |
| HYH05_RS10130 () | 2122500..2123111 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| HYH05_RS10135 () | 2123120..2124130 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HYH05_RS10140 () | 2124282..2125067 | - | 786 | WP_000571478.1 | hypothetical protein | VF |
| HYH05_RS10145 () | 2125064..2125819 | - | 756 | WP_000202988.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HYH05_RS10150 () | 2125898..2126830 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HYH05_RS10155 () | 2126846..2128168 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| HYH05_RS10160 () | 2128288..2129259 | + | 972 | WP_000448381.1 | putative HTH-type transcriptional regulator | VF |
| HYH05_RS10165 () | 2129391..2130833 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| HYH05_RS10170 () | 2130961..2131830 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| HYH05_RS10175 () | 2132168..2133643 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| HYH05_RS10180 () | 2133878..2135689 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| HYH05_RS10185 () | 2135726..2136367 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HYH05_RS10190 () | 2136422..2137600 | - | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HYH05_RS10195 () | 2137734..2138024 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| HYH05_RS10200 () | 2138091..2138447 | + | 357 | WP_001295500.1 | protein YebF | - |
| HYH05_RS10205 () | 2138774..2139433 | + | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| HYH05_RS10210 () | 2139597..2140766 | - | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| HYH05_RS10215 () | 2140823..2141248 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| HYH05_RS10220 () | 2141405..2143465 | + | 2061 | WP_000936971.1 | oligopeptidase B | - |
| HYH05_RS10225 () | 2143462..2144124 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| HYH05_RS10230 () | 2144148..2144804 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| HYH05_RS10235 () | 2144906..2145136 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HYH05_RS10240 () | 2145275..2145649 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| HYH05_RS10245 () | 2145653..2146525 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| HYH05_RS10250 () | 2146538..2146879 | + | 342 | WP_000976481.1 | YebY family protein | - |
| - () | 2146907..2147178 | - | 272 | - | - | Antitoxin Detail |
| - () | 2147037..2147140 | + | 104 | - | - | Toxin Detail |
| HYH05_RS10255 () | 2147275..2147931 | + | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| HYH05_RS10260 () | 2147932..2148123 | - | 192 | WP_001296140.1 | YebW family protein | - |
| HYH05_RS10265 () | 2148228..2148464 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| HYH05_RS10270 () | 2148582..2150021 | - | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HYH05_RS10275 () | 2150101..2152734 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| HYH05_RS10280 () | 2152703..2153986 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| HYH05_RS10285 () | 2154116..2154613 | + | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| HYH05_RS10290 () | 2154710..2155408 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| HYH05_RS10295 () | 2155428..2157476 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| HYH05_RS10300 () | 2157668..2158549 | + | 882 | WP_000984517.1 | protease HtpX | - |
| HYH05_RS10305 () | 2158595..2159968 | - | 1374 | WP_001309553.1 | MFS transporter | - |
| HYH05_RS10310 () | 2160145..2160936 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| HYH05_RS10315 () | 2161080..2161318 | - | 239 | Protein_2017 | hypothetical protein | - |
| HYH05_RS10320 () | 2161477..2161620 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| HYH05_RS10325 () | 2161695..2161982 | + | 288 | WP_001006866.1 | YebO family protein | - |
| HYH05_RS10330 () | 2162652..2162795 | + | 144 | WP_001295496.1 | YobF family protein | - |
| HYH05_RS10335 () | 2162808..2163017 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HYH05_RS10340 () | 2163183..2163992 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HYH05_RS10345 () | 2163989..2164555 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| HYH05_RS10350 () | 2164984..2165442 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| HYH05_RS10355 () | 2165497..2166348 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| HYH05_RS10360 () | 2166361..2167161 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|