MGE detailed information
MGE type: Prophage MGE length: 61154 bp
Accession: NZ_CP057864 Location: 2026618..2087771 Organism: Citrobacter freundii strain RHB12-C19 Replicon: chromosome
Accession: NZ_CP057864 Location: 2026618..2087771 Organism: Citrobacter freundii strain RHB12-C19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVW68_RS09565 () | 2022753..2024564 | + | 1812 | WP_057064580.1 | phosphogluconate dehydratase | - |
| HVW68_RS09570 () | 2024599..2025240 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HVW68_RS09575 () | 2025308..2026486 | - | 1179 | WP_060855107.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HVW68_RS09580 () | 2026618..2026908 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| HVW68_RS09585 () | 2027030..2027383 | + | 354 | WP_032949525.1 | protein YebF | - |
| HVW68_RS09590 () | 2027478..2028137 | + | 660 | WP_148373920.1 | tellurite resistance TerB family protein | - |
| HVW68_RS09595 () | 2028224..2030278 | + | 2055 | WP_175542014.1 | oligopeptidase B | - |
| HVW68_RS09600 () | 2030269..2030931 | - | 663 | WP_003841659.1 | exodeoxyribonuclease X | - |
| HVW68_RS09605 () | 2030955..2031611 | - | 657 | WP_046671220.1 | carbon-nitrogen hydrolase family protein | - |
| HVW68_RS09610 () | 2031718..2031948 | - | 231 | WP_106902137.1 | DNA polymerase III subunit theta | - |
| HVW68_RS09615 () | 2032092..2032466 | + | 375 | WP_181826147.1 | CopC domain-containing protein YobA | - |
| HVW68_RS09620 () | 2032470..2033342 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| HVW68_RS09625 () | 2033363..2033701 | + | 339 | WP_181826148.1 | YebY family protein | - |
| - () | 2033822..2033963 | - | 142 | - | - | Antitoxin Detail |
| - () | 2033857..2033960 | + | 104 | - | - | Toxin Detail |
| HVW68_RS09630 () | 2034093..2035172 | - | 1080 | WP_016150458.1 | hypothetical protein ; Integrase | Integrase |
| HVW68_RS09635 () | 2035150..2035410 | - | 261 | WP_072211989.1 | hypothetical protein | - |
| HVW68_RS09640 () | 2035474..2037945 | - | 2472 | WP_060855113.1 | exonuclease | - |
| HVW68_RS09645 () | 2038087..2038413 | - | 327 | WP_060855149.1 | Rrf2 family transcriptional regulator | - |
| HVW68_RS09650 () | 2038475..2038687 | - | 213 | WP_153070801.1 | hypothetical protein | - |
| HVW68_RS09655 () | 2038906..2039286 | - | 381 | WP_003832307.1 | helix-turn-helix domain-containing protein | - |
| HVW68_RS09660 () | 2039392..2039604 | + | 213 | WP_003832309.1 | helix-turn-helix transcriptional regulator | - |
| HVW68_RS09665 () | 2039608..2040162 | + | 555 | WP_060855150.1 | hypothetical protein | - |
| HVW68_RS09670 () | 2041112..2041783 | + | 672 | WP_072271946.1 | replication protein | - |
| HVW68_RS09675 () | 2041799..2042215 | + | 417 | WP_016150448.1 | PerC family transcriptional regulator | - |
| HVW68_RS09680 () | 2042221..2042559 | + | 339 | WP_060855152.1 | DUF977 family protein | - |
| HVW68_RS09685 () | 2042959..2043420 | + | 462 | Protein_1892 | DUF550 domain-containing protein | - |
| HVW68_RS09690 () | 2043574..2043687 | + | 114 | WP_053271637.1 | 3'-5' exoribonuclease | - |
| HVW68_RS09695 () | 2043931..2044311 | - | 381 | WP_053271636.1 | hypothetical protein | - |
| HVW68_RS09700 () | 2045012..2045575 | - | 564 | WP_170973743.1 | hypothetical protein | - |
| HVW68_RS09705 () | 2046066..2046299 | + | 234 | WP_060855117.1 | DinI-like family protein | - |
| HVW68_RS09710 () | 2046345..2046590 | + | 246 | WP_060855118.1 | hypothetical protein | - |
| HVW68_RS09715 () | 2046720..2046920 | + | 201 | WP_060855119.1 | hypothetical protein | - |
| HVW68_RS09720 () | 2046923..2047282 | + | 360 | WP_060855120.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HVW68_RS09725 () | 2047279..2048319 | + | 1041 | WP_060855121.1 | DUF968 domain-containing protein | - |
| HVW68_RS09730 () | 2048337..2049167 | + | 831 | WP_181826149.1 | antitermination protein | - |
| HVW68_RS09735 () | 2049356..2050141 | + | 786 | WP_181826150.1 | hypothetical protein | - |
| HVW68_RS09740 () | 2050407..2050595 | + | 189 | WP_079895698.1 | hypothetical protein | - |
| HVW68_RS09745 () | 2050685..2051071 | + | 387 | WP_001283171.1 | phage holin family protein | - |
| HVW68_RS09750 () | 2051058..2051339 | + | 282 | WP_072271948.1 | phage holin family protein | - |
| HVW68_RS09755 () | 2051495..2052109 | + | 615 | WP_181826151.1 | glycoside hydrolase family 19 protein | - |
| HVW68_RS09760 () | 2052117..2052386 | + | 270 | WP_060855128.1 | hypothetical protein | - |
| HVW68_RS09765 () | 2052343..2052543 | + | 201 | WP_072271949.1 | hypothetical protein | - |
| HVW68_RS09770 () | 2052674..2053069 | + | 396 | WP_060855129.1 | hypothetical protein | - |
| HVW68_RS09775 () | 2053236..2053451 | + | 216 | WP_060855130.1 | hypothetical protein | - |
| HVW68_RS09780 () | 2053439..2053789 | + | 351 | WP_072271950.1 | HNH endonuclease | - |
| HVW68_RS09785 () | 2053946..2054443 | + | 498 | WP_003841734.1 | phage terminase small subunit P27 family | - |
| HVW68_RS09790 () | 2054443..2056200 | + | 1758 | WP_181826152.1 | terminase large subunit | - |
| HVW68_RS09795 () | 2056348..2057574 | + | 1227 | WP_060855133.1 | phage portal protein | - |
| HVW68_RS09800 () | 2057567..2058166 | + | 600 | WP_060855134.1 | HK97 family phage prohead protease | - |
| HVW68_RS09805 () | 2058176..2059414 | + | 1239 | WP_060855135.1 | phage major capsid protein | - |
| HVW68_RS09810 () | 2059492..2059809 | + | 318 | WP_060855136.1 | head-tail connector protein | - |
| HVW68_RS09815 () | 2059879..2060091 | + | 213 | WP_129622559.1 | hypothetical protein | - |
| HVW68_RS09820 () | 2060093..2060425 | + | 333 | WP_060855138.1 | phage head closure protein | - |
| HVW68_RS09825 () | 2060418..2060957 | + | 540 | WP_181826153.1 | HK97 gp10 family phage protein | - |
| HVW68_RS09830 () | 2060954..2061319 | + | 366 | WP_060855140.1 | DUF3168 domain-containing protein | - |
| HVW68_RS09835 () | 2061378..2061869 | + | 492 | WP_046671182.1 | phage major tail protein | - |
| HVW68_RS09840 () | 2061922..2062302 | + | 381 | WP_060855141.1 | phage tail assembly chaperone family protein, TAC | - |
| HVW68_RS09845 () | 2062287..2062589 | + | 303 | WP_046671180.1 | hypothetical protein | - |
| HVW68_RS09850 () | 2062657..2062944 | + | 288 | WP_046671179.1 | hypothetical protein | - |
| HVW68_RS09855 () | 2063000..2065474 | + | 2475 | WP_060855142.1 | phage tail tape measure protein | - |
| HVW68_RS09860 () | 2065516..2065692 | + | 177 | WP_155643922.1 | hypothetical protein | - |
| HVW68_RS09865 () | 2066037..2066630 | + | 594 | WP_181826154.1 | hypothetical protein | - |
| HVW68_RS09870 () | 2066630..2067214 | + | 585 | WP_060855145.1 | hypothetical protein | - |
| HVW68_RS09875 () | 2067221..2067619 | + | 399 | WP_060855146.1 | hypothetical protein | - |
| HVW68_RS09880 () | 2067619..2070339 | + | 2721 | WP_060855147.1 | DUF1983 domain-containing protein | - |
| HVW68_RS09885 () | 2070339..2071283 | + | 945 | WP_060855148.1 | hypothetical protein | - |
| HVW68_RS09890 () | 2071293..2071709 | + | 417 | Protein_1933 | phage tail protein | - |
| HVW68_RS09895 () | 2071893..2072384 | + | 492 | WP_121528472.1 | tail fiber domain-containing protein | - |
| HVW68_RS09900 () | 2072564..2073073 | - | 510 | WP_081092925.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| HVW68_RS09905 () | 2073361..2073468 | - | 108 | Protein_1936 | DinI-like family protein | - |
| HVW68_RS09910 () | 2073821..2074462 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| HVW68_RS09915 () | 2074463..2074654 | - | 192 | WP_003034941.1 | YebW family protein | - |
| HVW68_RS09920 () | 2074757..2074993 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HVW68_RS09925 () | 2075094..2076515 | - | 1422 | WP_181826155.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HVW68_RS09930 () | 2076595..2079228 | - | 2634 | WP_181826156.1 | hypothetical protein | VF |
| HVW68_RS09935 () | 2079197..2080480 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| HVW68_RS09940 () | 2080609..2081106 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| HVW68_RS09945 () | 2081203..2081889 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| HVW68_RS09950 () | 2081909..2083957 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| HVW68_RS09955 () | 2084150..2085031 | + | 882 | WP_003034964.1 | protease HtpX | - |
| HVW68_RS09960 () | 2085078..2086451 | - | 1374 | WP_181826157.1 | MFS transporter | - |
| HVW68_RS09965 () | 2086626..2087417 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| HVW68_RS09970 () | 2087532..2087771 | - | 240 | WP_003841988.1 | hypothetical protein | - |
| HVW68_RS09975 () | 2087936..2088079 | + | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| HVW68_RS09980 () | 2088154..2088438 | + | 285 | WP_003841991.1 | YebO family protein | - |
| HVW68_RS09985 () | 2089075..2089218 | + | 144 | WP_003034983.1 | YobF family protein | - |
| HVW68_RS09990 () | 2089231..2089440 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HVW68_RS09995 () | 2089660..2091405 | + | 1746 | WP_003841630.1 | peptidoglycan glycosyltransferase FtsI | - |
| HVW68_RS10000 () | 2091469..2092278 | + | 810 | WP_003841628.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|