MGE detailed information
MGE type: Conjugative plasmid MGE length: 145940 bp
Accession: NZ_CP057239 Location: 1..145940 Organism: Escherichia fergusonii strain RHB32-C09 Replicon: plasmid pRHB32-C09_2
Accession: NZ_CP057239 Location: 1..145940 Organism: Escherichia fergusonii strain RHB32-C09 Replicon: plasmid pRHB32-C09_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVZ00_RS22230 () | 1..978 | + | 978 | WP_089580515.1 | RepB family plasmid replication initiator protein | - |
| HVZ00_RS22235 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| HVZ00_RS22240 () | 2124..2294 | - | 171 | WP_112042731.1 | transcriptional regulator | - |
| HVZ00_RS22245 () | 3092..4525 | - | 1434 | WP_112864132.1 | Hemolysin secretion protein D, chromosomal | VF |
| HVZ00_RS22250 () | 4539..6662 | - | 2124 | WP_181669083.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| HVZ00_RS22255 () | 6726..9788 | - | 3063 | WP_181669074.1 | Hemolysin, chromosomal | VF |
| HVZ00_RS22260 () | 9799..10347 | - | 549 | WP_181669075.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| HVZ00_RS22265 () | 10924..11667 | + | 744 | Protein_7 | carbonic anhydrase family protein | - |
| HVZ00_RS22270 () | 11924..12457 | + | 534 | Protein_8 | IS21 family transposase ISSen8 | Transposase |
| HVZ00_RS22275 () | 12454..12588 | + | 135 | WP_097419060.1 | AIDA-I autotransporter | VF |
| HVZ00_RS22280 () | 12640..13853 | + | 1214 | WP_181669076.1 | IS3 family transposase IS629 | Transposase |
| HVZ00_RS22285 () | 13895..14969 | - | 1075 | Protein_11 | IS21 family transposase ISEc12 | Transposase |
| HVZ00_RS22290 () | 15016..16553 | - | 1538 | Protein_12 | IS3 family transposase | - |
| HVZ00_RS22295 () | 16890..17366 | + | 477 | WP_097419079.1 | YfdX family protein | - |
| HVZ00_RS22300 () | 17938..18519 | + | 582 | WP_097419080.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| HVZ00_RS22305 () | 19873..19968 | - | 96 | Protein_15 | transposase domain-containing protein | - |
| HVZ00_RS22310 () | 20017..20814 | - | 798 | Protein_16 | AIDA-I autotransporter | VF |
| HVZ00_RS22315 () | 20773..21917 | + | 1145 | Protein_17 | IS3 family transposase | - |
| HVZ00_RS22320 () | 22540..23382 | + | 843 | WP_112042711.1 | helix-turn-helix domain-containing protein | - |
| HVZ00_RS22325 () | 23532..24212 | + | 681 | WP_181669077.1 | EAL domain-containing protein | - |
| HVZ00_RS22330 () | 24465..25253 | + | 789 | WP_157918814.1 | Right origin-binding protein | VF |
| HVZ00_RS22335 () | 25395..25799 | + | 405 | WP_181669078.1 | IS3 family transposase ISBth167 | Transposase |
| HVZ00_RS22340 () | 25813..26058 | - | 246 | WP_143362987.1 | hypothetical protein | - |
| HVZ00_RS22345 () | 26130..27077 | - | 948 | WP_021555106.1 | LysR family transcriptional regulator | - |
| HVZ00_RS22350 () | 27248..27913 | - | 666 | WP_181669079.1 | ParB N-terminal domain-containing protein | - |
| HVZ00_RS22355 () | 27898..29118 | - | 1221 | WP_032154595.1 | phosphoadenosine phosphosulfate reductase | - |
| HVZ00_RS22360 () | 29189..30382 | - | 1194 | WP_181669080.1 | hypothetical protein | - |
| HVZ00_RS22365 () | 30421..31008 | - | 588 | WP_097419011.1 | type 1 fimbrial protein | - |
| HVZ00_RS22370 () | 31018..33567 | - | 2550 | WP_112042714.1 | Outer membrane usher protein SfmD | VF |
| HVZ00_RS22375 () | 33577..34356 | - | 780 | WP_172906563.1 | molecular chaperone | - |
| HVZ00_RS22380 () | 34402..35085 | - | 684 | WP_172906562.1 | putative fimbrial chaperone YraI | VF |
| HVZ00_RS22385 () | 35124..35672 | - | 549 | WP_172906561.1 | fimbrial protein | - |
| HVZ00_RS22390 () | 35723..36316 | - | 594 | WP_097419006.1 | hypothetical protein | VF |
| HVZ00_RS22395 () | 36316..37032 | - | 717 | WP_097419005.1 | Chaperone protein FimC | VF |
| HVZ00_RS22400 () | 37083..37520 | - | 438 | WP_157918813.1 | hypothetical protein | - |
| HVZ00_RS22405 () | 37831..38324 | - | 494 | Protein_35 | ISKra4 family transposase ISEc51 | Transposase |
| HVZ00_RS22410 () | 38605..39609 | - | 1005 | WP_001378797.1 | IS110 family transposase IS4321 | Transposase |
| HVZ00_RS22415 () | 39948..40277 | - | 330 | Protein_37 | IS110 family transposase | - |
| HVZ00_RS22420 () | 40320..41858 | - | 1539 | WP_053265917.1 | IS66 family transposase ISEc8 | Transposase |
| HVZ00_RS22425 () | 41908..42255 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| HVZ00_RS22430 () | 42252..42632 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| HVZ00_RS22435 () | 42734..42939 | + | 206 | Protein_41 | sulfite reductase subunit C | - |
| HVZ00_RS22440 () | 43089..46988 | - | 3900 | WP_112042716.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| HVZ00_RS22445 () | 47027..47911 | - | 885 | WP_053265915.1 | hypothetical protein | - |
| HVZ00_RS22450 () | 47889..48131 | - | 243 | WP_072135115.1 | hypothetical protein | - |
| HVZ00_RS22455 () | 48198..49769 | - | 1572 | WP_181668587.1 | IS66 family transposase ISCro1 | Transposase |
| HVZ00_RS22460 () | 49789..50136 | - | 348 | WP_053265945.1 | IS66 family transposase ISCro1 | Transposase |
| HVZ00_RS22465 () | 50136..50786 | - | 651 | WP_097419002.1 | IS66 family transposase IS679 | Transposase |
| HVZ00_RS22470 () | 51119..52459 | - | 1341 | WP_181654382.1 | sensor domain-containing diguanylate cyclase | - |
| HVZ00_RS22475 () | 52842..53279 | - | 438 | Protein_49 | tetratricopeptide repeat protein | - |
| HVZ00_RS22480 () | 53335..54548 | + | 1214 | WP_181668588.1 | IS3 family transposase IS629 | Transposase |
| HVZ00_RS22485 () | 54590..55195 | - | 606 | Protein_51 | tetratricopeptide repeat protein | - |
| HVZ00_RS22490 () | 55528..56286 | - | 759 | WP_053265824.1 | AraC family transcriptional regulator | - |
| HVZ00_RS22495 () | 56858..56965 | + | 108 | Protein_53 | IS66 family insertion sequence element accessory protein TnpB | - |
| HVZ00_RS22500 () | 56962..57312 | + | 351 | WP_000624677.1 | IS66 family transposase IS682 | Transposase |
| HVZ00_RS22505 () | 57343..58146 | + | 804 | Protein_55 | IS66 family transposase ISEc47 | Transposase |
| HVZ00_RS22510 () | 58341..59875 | + | 1535 | Protein_56 | IS21 family transposase ISEc12 | Transposase |
| HVZ00_RS22515 () | 59890..60636 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HVZ00_RS22520 () | 60724..61254 | + | 531 | Protein_58 | ion transporter | - |
| HVZ00_RS22525 () | 61813..62895 | - | 1083 | WP_181669081.1 | hypothetical protein | - |
| HVZ00_RS22530 () | 62955..65591 | - | 2637 | WP_181669082.1 | TcfC E-set like domain-containing protein | - |
| HVZ00_RS22535 () | 65630..66136 | - | 507 | WP_112042699.1 | hypothetical protein | VF |
| HVZ00_RS22540 () | 66200..66928 | - | 729 | WP_112042698.1 | putative fimbrial chaperone EcpE | VF |
| HVZ00_RS22545 () | 67926..68291 | + | 366 | WP_097418983.1 | transposase | - |
| HVZ00_RS22550 () | 68291..69474 | + | 1184 | Protein_64 | IS91 family transposase ISEc37 | Transposase |
| HVZ00_RS22555 () | 69657..71153 | - | 1497 | Protein_65 | hypothetical protein | - |
| HVZ00_RS22560 () | 71633..71914 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HVZ00_RS22565 () | 71911..72180 | - | 270 | WP_000079945.1 | hypothetical protein | Antitoxin Detail |
| HVZ00_RS22570 () | 73094..73951 | - | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| HVZ00_RS22575 () | 73944..74426 | - | 483 | WP_001443034.1 | hypothetical protein | - |
| HVZ00_RS22580 () | 74419..74493 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| HVZ00_RS22585 () | 74727..74984 | - | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| HVZ00_RS22590 () | 75251..75457 | - | 207 | WP_181654380.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 75444..75505 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 75444..75505 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 75444..75505 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 75444..75505 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| HVZ00_RS22595 () | 75801..76112 | + | 312 | WP_000802277.1 | hypothetical protein | - |
| HVZ00_RS22600 () | 76623..76835 | - | 213 | WP_042047803.1 | hypothetical protein | - |
| HVZ00_RS22605 () | 76970..77530 | - | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| HVZ00_RS22610 () | 77585..78331 | - | 747 | WP_001541899.1 | conjugal transfer pilus acetylase TraX | - |
| HVZ00_RS22615 () | 78351..83621 | - | 5271 | WP_181669070.1 | Multifunctional conjugation protein TraI | Relaxase |
| HVZ00_RS22620 () | 83703..83930 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HVZ00_RS22625 () | 83930..84328 | + | 399 | WP_000911314.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HVZ00_RS22630 () | 84337..86526 | - | 2190 | WP_181669071.1 | type IV conjugative transfer system coupling protein TraD | - |
| HVZ00_RS22635 () | 86779..87510 | - | 732 | WP_000850423.1 | complement resistance protein TraT | - |
| HVZ00_RS22640 () | 87524..88033 | - | 510 | WP_112042696.1 | conjugal transfer entry exclusion protein TraS | - |
| HVZ00_RS22645 () | 88030..90855 | - | 2826 | WP_098030591.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HVZ00_RS22650 () | 90852..92225 | - | 1374 | WP_057781204.1 | conjugal transfer protein TraH | - |
| HVZ00_RS22655 () | 92225..92638 | - | 414 | WP_112042694.1 | F-type conjugal transfer protein TrbF | - |
| HVZ00_RS22660 () | 92592..92933 | - | 342 | WP_012477176.1 | P-type conjugative transfer protein TrbJ | - |
| HVZ00_RS22665 () | 92863..93408 | - | 546 | WP_000059835.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HVZ00_RS22670 () | 93395..93679 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HVZ00_RS22675 () | 93760..94074 | + | 315 | WP_000415570.1 | hypothetical protein | - |
| HVZ00_RS22680 () | 94076..94423 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| HVZ00_RS22685 () | 94439..95182 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HVZ00_RS22690 () | 95175..95432 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| HVZ00_RS22695 () | 95460..97268 | - | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HVZ00_RS22700 () | 97265..97903 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HVZ00_RS22705 () | 97912..98904 | - | 993 | WP_039587809.1 | conjugal transfer pilus assembly protein TraU | - |
| HVZ00_RS22710 () | 98901..99533 | - | 633 | WP_001203749.1 | type-F conjugative transfer system protein TraW | - |
| HVZ00_RS22715 () | 99530..99916 | - | 387 | WP_000214079.1 | type-F conjugative transfer system protein TrbI | - |
| HVZ00_RS22720 () | 99913..102540 | - | 2628 | WP_181669072.1 | type IV secretion system protein TraC | - |
| HVZ00_RS22725 () | 102700..102921 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| HVZ00_RS22730 () | 103056..103571 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HVZ00_RS22735 () | 103568..103819 | - | 252 | WP_105450581.1 | conjugal transfer protein TrbG | - |
| HVZ00_RS22740 () | 103812..104165 | - | 354 | WP_163397182.1 | conjugal transfer protein TrbD | - |
| HVZ00_RS22745 () | 104119..104709 | - | 591 | WP_163397183.1 | conjugal transfer protein TraP | - |
| HVZ00_RS22750 () | 104699..106126 | - | 1428 | WP_181669073.1 | conjugal transfer protein TraB | - |
| HVZ00_RS22755 () | 106126..106830 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HVZ00_RS22760 () | 106841..107407 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HVZ00_RS22765 () | 107429..107740 | - | 312 | WP_000012126.1 | type IV conjugative transfer system protein TraL | - |
| HVZ00_RS22770 () | 107755..108120 | - | 366 | WP_000994782.1 | type IV conjugative transfer system pilin TraA | - |
| HVZ00_RS22775 () | 108153..108548 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| HVZ00_RS22780 () | 108647..109336 | - | 690 | WP_021532962.1 | conjugal transfer transcriptional regulator TraJ | - |
| HVZ00_RS22785 () | 109523..109906 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| HVZ00_RS22790 () | 110320..110829 | + | 510 | WP_032248719.1 | hypothetical protein | VF |
| HVZ00_RS22795 () | 111125..111946 | - | 822 | Protein_113 | DUF945 domain-containing protein | - |
| HVZ00_RS22800 () | 112065..112352 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| HVZ00_RS22805 () | 112377..112583 | - | 207 | WP_032248717.1 | hypothetical protein | - |
| HVZ00_RS22810 () | 113554..115221 | + | 1668 | WP_052991863.1 | group II intron reverse transcriptase/maturase | - |
| HVZ00_RS22815 () | 115362..115529 | - | 168 | WP_001422689.1 | hypothetical protein | - |
| HVZ00_RS22820 () | 115622..115783 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 115829..116045 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
| - () | 115829..116045 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
| - () | 115829..116045 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
| - () | 115829..116045 | - | 217 | NuclAT_0 | - | Antitoxin Detail |
| HVZ00_RS22825 () | 116057..116731 | - | 675 | WP_112042691.1 | plasmid SOS inhibition protein A | - |
| HVZ00_RS22830 () | 116728..117162 | - | 435 | WP_011666470.1 | conjugation system SOS inhibitor PsiB | - |
| HVZ00_RS22835 () | 117217..119196 | - | 1980 | WP_112042690.1 | ParB/RepB/Spo0J family partition protein | - |
| HVZ00_RS22840 () | 119262..119495 | - | 234 | WP_000006002.1 | DUF905 family protein | - |
| HVZ00_RS22845 () | 119553..120074 | - | 522 | WP_134887421.1 | single-stranded DNA-binding protein | - |
| HVZ00_RS22850 () | 120555..120871 | + | 317 | Protein_124 | pilus assembly protein | - |
| HVZ00_RS22855 () | 120850..121041 | - | 192 | WP_025269849.1 | hypothetical protein | - |
| HVZ00_RS22860 () | 121038..121460 | - | 423 | WP_088552424.1 | DUF1380 family protein | - |
| HVZ00_RS22865 () | 121507..121809 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| HVZ00_RS22870 () | 122348..123118 | - | 771 | Protein_128 | hypothetical protein | - |
| HVZ00_RS22875 () | 123163..123495 | - | 333 | WP_112042688.1 | DUF1380 family protein | - |
| HVZ00_RS22880 () | 123650..124978 | + | 1329 | WP_112042687.1 | IS4 family transposase IS4 | Transposase |
| HVZ00_RS22885 () | 124989..125168 | - | 180 | WP_032248832.1 | hypothetical protein | - |
| HVZ00_RS22890 () | 125169..125852 | - | 684 | WP_089637810.1 | DNA methylase | - |
| HVZ00_RS22895 () | 125928..126239 | - | 312 | WP_032248837.1 | hypothetical protein | - |
| HVZ00_RS22900 () | 126236..127162 | - | 927 | Protein_134 | DUF1281 domain-containing protein | - |
| HVZ00_RS22905 () | 127790..128761 | - | 972 | WP_032248840.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HVZ00_RS22910 () | 128761..129927 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HVZ00_RS22915 () | 130424..130597 | - | 174 | Protein_137 | RepB family plasmid replication initiator protein | - |
| HVZ00_RS22925 () | 131818..132210 | - | 393 | WP_112042728.1 | tyrosine-type recombinase/integrase | - |
| HVZ00_RS22930 () | 132211..132516 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HVZ00_RS22935 () | 132518..132736 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HVZ00_RS22940 () | 133323..133553 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HVZ00_RS22945 () | 133550..133966 | + | 417 | WP_097309518.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HVZ00_RS22950 () | 134128..136266 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| HVZ00_RS22955 () | 136582..136812 | + | 231 | WP_097309516.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HVZ00_RS22960 () | 136809..137225 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HVZ00_RS22965 () | 137270..141063 | - | 3794 | Protein_147 | pcar | - |
| HVZ00_RS22970 () | 141412..141669 | + | 258 | WP_000343099.1 | hypothetical protein | - |
| HVZ00_RS22975 () | 141669..142292 | + | 624 | WP_097418961.1 | hypothetical protein | - |
| HVZ00_RS22980 () | 142354..142566 | - | 213 | WP_097330523.1 | hypothetical protein | - |
| HVZ00_RS22985 () | 142881..143741 | - | 861 | WP_000704533.1 | putative protein YcjY | VF |
| HVZ00_RS22990 () | 143904..144014 | - | 111 | Protein_152 | transposase domain-containing protein | - |
| HVZ00_RS22995 () | 144310..144579 | + | 270 | WP_039587803.1 | hypothetical protein | - |
| HVZ00_RS23000 () | 144567..145157 | + | 591 | Protein_154 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|