MGE detailed information
MGE type: IScluster/Tn MGE length: 19546 bp
Accession: NZ_CP056575 Location: 97828..117373 Organism: Citrobacter freundii strain RHBSTW-00370 Replicon: plasmid pRHBSTW-00370_3
Accession: NZ_CP056575 Location: 97828..117373 Organism: Citrobacter freundii strain RHBSTW-00370 Replicon: plasmid pRHBSTW-00370_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV178_RS26660 () | 93732..95201 | + | 1470 | WP_022652294.1 | fructuronate reductase | - |
| HV178_RS26665 () | 95221..96651 | + | 1431 | WP_022652293.1 | glucuronate isomerase | - |
| HV178_RS26670 () | 96869..97657 | + | 789 | WP_032430963.1 | Uxu operon transcriptional regulator | - |
| HV178_RS26675 () | 97828..98505 | - | 678 | Protein_106 | IS66 family transposase ISKpn24 | Transposase |
| HV178_RS26680 () | 98540..101437 | - | 2898 | WP_022652290.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| HV178_RS26685 () | 101532..102137 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| HV178_RS26695 () | 103960..104643 | - | 684 | WP_071698035.1 | hypothetical protein | - |
| HV178_RS26700 () | 104900..105139 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HV178_RS26705 () | 105139..105426 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HV178_RS26710 () | 105709..105933 | + | 225 | Protein_113 | hypothetical protein | - |
| HV178_RS26715 () | 106228..107244 | + | 1017 | WP_181500132.1 | IS5 family transposase IS5D | Transposase |
| HV178_RS26720 () | 107385..107579 | + | 195 | Protein_115 | endonuclease | - |
| HV178_RS26725 () | 107758..108390 | + | 633 | WP_022652286.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HV178_RS26730 () | 108444..108644 | + | 201 | WP_040219232.1 | hypothetical protein | - |
| HV178_RS26735 () | 108791..109741 | + | 951 | WP_058654545.1 | Recombination-promoting nuclease RpnA | VF |
| HV178_RS26740 () | 109738..110028 | - | 291 | WP_088169158.1 | hypothetical protein | - |
| HV178_RS26745 () | 110116..110499 | + | 384 | WP_001201739.1 | IS66 family insertion sequence hypothetical protein | - |
| HV178_RS26750 () | 110496..110843 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| HV178_RS26755 () | 110893..112428 | + | 1536 | WP_001000409.1 | IS66 family transposase ISSgsp1 | Transposase |
| HV178_RS26760 () | 112471..112794 | - | 324 | Protein_123 | DUF2913 family protein | - |
| HV178_RS26765 () | 112791..113123 | - | 333 | Protein_124 | hypothetical protein | - |
| HV178_RS26770 () | 113189..114169 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| HV178_RS26775 () | 114318..115523 | - | 1206 | Protein_126 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| HV178_RS26780 () | 115691..116347 | + | 657 | WP_181553755.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HV178_RS26785 () | 116393..117373 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| HV178_RS26790 () | 118274..118924 | + | 651 | WP_001567322.1 | CPBP family intramembrane metalloprotease | - |
| HV178_RS26795 () | 118927..120180 | + | 1254 | WP_001567323.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| HV178_RS26800 () | 120180..122357 | + | 2178 | WP_001567324.1 | peptidase domain-containing ABC transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|