MGE detailed information
MGE type: Prophage MGE length: 51274 bp
Accession: NZ_CP056573 Location: 2097997..2149270 Organism: Citrobacter freundii strain RHBSTW-00370 Replicon: chromosome
Accession: NZ_CP056573 Location: 2097997..2149270 Organism: Citrobacter freundii strain RHBSTW-00370 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV178_RS09995 () | 2093706..2093897 | - | 192 | WP_101739758.1 | hypothetical protein | - |
| HV178_RS10000 () | 2094063..2094617 | + | 555 | WP_101739759.1 | hypothetical protein | - |
| HV178_RS10005 () | 2094618..2094899 | + | 282 | WP_101739760.1 | hypothetical protein | - |
| HV178_RS10010 () | 2094899..2095285 | + | 387 | WP_101739761.1 | hypothetical protein | - |
| HV178_RS10015 () | 2095424..2095729 | + | 306 | WP_101739762.1 | hypothetical protein | - |
| HV178_RS10020 () | 2095744..2095968 | + | 225 | WP_101739763.1 | hypothetical protein | - |
| HV178_RS10025 () | 2096533..2097258 | + | 726 | WP_101739764.1 | transposase | - |
| HV178_RS10030 () | 2097267..2097680 | + | 414 | WP_101739765.1 | hypothetical protein | - |
| HV178_RS10035 () | 2098166..2099286 | + | 1121 | WP_085950818.1 | IS3 family transposase ISSen4 | Transposase |
| HV178_RS10040 () | 2099330..2101300 | + | 1971 | WP_181553737.1 | tape measure protein | - |
| HV178_RS10045 () | 2101394..2102164 | + | 771 | WP_101739768.1 | hypothetical protein | - |
| HV178_RS10050 () | 2102161..2103684 | - | 1524 | WP_101739769.1 | hypothetical protein ; Integrase | Integrase |
| HV178_RS10055 () | 2103760..2104242 | - | 483 | Protein_1966 | DUF72 domain-containing protein | - |
| HV178_RS10060 () | 2104239..2104805 | - | 567 | WP_003841685.1 | hydrolase | - |
| HV178_RS10065 () | 2105071..2106843 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| HV178_RS10070 () | 2106845..2107288 | + | 444 | WP_003844155.1 | dihydroneopterin triphosphate diphosphatase | - |
| HV178_RS10075 () | 2107317..2108060 | + | 744 | WP_003034865.1 | putative transcriptional regulatory protein YebC | VF |
| HV178_RS10080 () | 2108095..2108616 | + | 522 | WP_048232240.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HV178_RS10085 () | 2108617..2109219 | - | 603 | WP_048232238.1 | YebB family permuted papain-like enzyme | - |
| HV178_RS10090 () | 2109484..2110380 | - | 897 | WP_087878987.1 | DUF4034 domain-containing protein | - |
| HV178_RS10095 () | 2110777..2110977 | - | 201 | WP_048232235.1 | hypothetical protein | - |
| HV178_RS10100 () | 2111046..2111657 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| HV178_RS10105 () | 2111666..2112676 | + | 1011 | WP_003841680.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HV178_RS10110 () | 2112755..2113540 | - | 786 | WP_003034874.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| HV178_RS10115 () | 2113537..2114292 | - | 756 | WP_046671223.1 | Zinc import ATP-binding protein ZnuC | VF |
| HV178_RS10120 () | 2114371..2115315 | + | 945 | WP_003844151.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HV178_RS10125 () | 2115331..2116650 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| HV178_RS10130 () | 2116770..2117741 | + | 972 | WP_003841672.1 | Lipid A biosynthesis myristoyltransferase | VF |
| HV178_RS10135 () | 2117785..2119227 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| HV178_RS10140 () | 2119346..2120215 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| HV178_RS10145 () | 2120583..2122058 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| HV178_RS10150 () | 2122292..2124103 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| HV178_RS10155 () | 2124138..2124779 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV178_RS10160 () | 2124845..2126023 | - | 1179 | WP_048232229.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV178_RS10165 () | 2126155..2126445 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| HV178_RS10170 () | 2126567..2126920 | + | 354 | WP_003034909.1 | protein YebF | - |
| HV178_RS10175 () | 2127015..2127674 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| HV178_RS10180 () | 2127761..2129815 | + | 2055 | WP_174329788.1 | oligopeptidase B | - |
| HV178_RS10185 () | 2129806..2130468 | - | 663 | WP_003841659.1 | exodeoxyribonuclease X | - |
| HV178_RS10190 () | 2130492..2131148 | - | 657 | WP_046671220.1 | carbon-nitrogen hydrolase family protein | - |
| HV178_RS10195 () | 2131255..2131485 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV178_RS10200 () | 2131629..2132003 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| HV178_RS10205 () | 2132007..2132879 | + | 873 | WP_048232225.1 | copper homeostasis membrane protein CopD | - |
| HV178_RS10210 () | 2132900..2133238 | + | 339 | WP_003034934.1 | YebY family protein | - |
| - () | 2133359..2133502 | - | 144 | - | - | Antitoxin Detail |
| - () | 2133394..2133497 | + | 104 | - | - | Toxin Detail |
| HV178_RS10215 () | 2133651..2134292 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| HV178_RS10220 () | 2134293..2134484 | - | 192 | WP_003841978.1 | YebW family protein | - |
| HV178_RS10225 () | 2134587..2134823 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV178_RS10230 () | 2134924..2136345 | - | 1422 | WP_071698462.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV178_RS10235 () | 2136425..2139058 | - | 2634 | WP_003034947.1 | hypothetical protein | VF |
| HV178_RS10240 () | 2139027..2140310 | - | 1284 | WP_016150395.1 | membrane integrity lipid transport subunit YebS | - |
| HV178_RS10245 () | 2140439..2140936 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| HV178_RS10250 () | 2141033..2141719 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| HV178_RS10255 () | 2141739..2143787 | + | 2049 | WP_048232223.1 | carboxy terminal-processing peptidase | - |
| HV178_RS10260 () | 2143980..2144861 | + | 882 | WP_003034964.1 | protease HtpX | - |
| HV178_RS10265 () | 2144908..2146281 | - | 1374 | WP_048232221.1 | MFS transporter | - |
| HV178_RS10270 () | 2146456..2147247 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| HV178_RS10275 () | 2147362..2147601 | - | 240 | WP_003841988.1 | hypothetical protein | - |
| HV178_RS10280 () | 2147766..2147909 | + | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| HV178_RS10285 () | 2147984..2148268 | + | 285 | WP_003034980.1 | YebO family protein | - |
| HV178_RS10290 () | 2148905..2149048 | + | 144 | WP_003034983.1 | YobF family protein | - |
| HV178_RS10295 () | 2149061..2149270 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HV178_RS10300 () | 2149490..2151235 | + | 1746 | WP_003021017.1 | peptidoglycan glycosyltransferase FtsI | - |
| HV178_RS10305 () | 2151299..2152108 | + | 810 | WP_003841628.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HV178_RS10310 () | 2152105..2152671 | - | 567 | WP_003021013.1 | manganese efflux pump MntP | - |
| HV178_RS10315 () | 2153104..2153562 | - | 459 | WP_003021010.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|