MGE detailed information
MGE type: Prophage MGE length: 62986 bp
Accession: NZ_CP056421 Location: 2975422..3038407 Organism: Citrobacter sp. RHBSTW-00524 Replicon: chromosome
Accession: NZ_CP056421 Location: 2975422..3038407 Organism: Citrobacter sp. RHBSTW-00524 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV229_RS14330 () | 2970693..2972741 | - | 2049 | WP_029139508.1 | carboxy terminal-processing peptidase | - |
| HV229_RS14335 () | 2972761..2973447 | - | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| HV229_RS14340 () | 2973544..2974041 | - | 498 | WP_016152783.1 | GAF domain-containing protein | - |
| HV229_RS14345 () | 2974170..2975453 | + | 1284 | WP_016152782.1 | membrane integrity lipid transport subunit YebS | - |
| HV229_RS14350 () | 2975422..2978055 | + | 2634 | WP_016156286.1 | hypothetical protein | VF |
| HV229_RS14355 () | 2978079..2979560 | + | 1482 | WP_131381131.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV229_RS14360 () | 2979661..2979897 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV229_RS14365 () | 2980000..2980191 | + | 192 | WP_016152779.1 | YebW family protein | - |
| HV229_RS14370 () | 2980192..2980833 | - | 642 | WP_181545694.1 | protein-serine/threonine phosphatase | - |
| HV229_RS14375 () | 2980924..2981754 | - | 831 | WP_181545695.1 | GIY-YIG nuclease family protein | - |
| HV229_RS14380 () | 2982377..2982766 | - | 390 | WP_181545696.1 | LexA family transcriptional regulator | - |
| HV229_RS14385 () | 2982913..2982993 | + | 81 | Protein_2826 | DinI family protein | - |
| HV229_RS14390 () | 2983087..2983329 | + | 243 | WP_181545697.1 | DinI family protein | - |
| HV229_RS14395 () | 2983465..2984697 | - | 1233 | WP_181545698.1 | phage tail protein | - |
| HV229_RS14400 () | 2984760..2984990 | - | 231 | WP_181545699.1 | cor protein | - |
| HV229_RS14405 () | 2985106..2985798 | - | 693 | WP_181545700.1 | hypothetical protein | - |
| HV229_RS14410 () | 2985798..2986109 | - | 312 | WP_181541802.1 | hypothetical protein | - |
| HV229_RS14415 () | 2986102..2989302 | - | 3201 | WP_181545701.1 | DUF1983 domain-containing protein | - |
| HV229_RS14420 () | 2989358..2989957 | - | 600 | WP_047416550.1 | tail assembly protein | - |
| HV229_RS14425 () | 2989945..2990676 | - | 732 | WP_181545702.1 | C40 family peptidase | - |
| HV229_RS14430 () | 2990689..2991459 | - | 771 | WP_065554635.1 | phage minor tail protein L | - |
| HV229_RS14435 () | 2991459..2991809 | - | 351 | WP_065554634.1 | phage tail protein | - |
| HV229_RS14440 () | 2992153..2992329 | - | 177 | WP_158513309.1 | hypothetical protein | - |
| HV229_RS14445 () | 2992402..2993310 | - | 909 | WP_181545703.1 | phage antirepressor N-terminal domain-containing protein | - |
| HV229_RS14450 () | 2993347..2993514 | - | 168 | WP_114141104.1 | Arc family DNA-binding protein | - |
| HV229_RS14455 () | 2993604..2993906 | + | 303 | WP_065944830.1 | Arc family DNA-binding protein | - |
| HV229_RS14460 () | 2993959..2994459 | - | 501 | WP_071687886.1 | hypothetical protein | - |
| HV229_RS14465 () | 2994422..2997121 | - | 2700 | Protein_2842 | phage tail tape measure protein | - |
| HV229_RS14470 () | 2997706..2997993 | - | 288 | WP_181545704.1 | DUF1799 domain-containing protein | - |
| HV229_RS14475 () | 2998011..2998349 | - | 339 | WP_181545705.1 | hypothetical protein | - |
| HV229_RS14480 () | 2998391..2999323 | - | 933 | WP_181545706.1 | immunoglobulin domain-containing protein | - |
| HV229_RS14485 () | 2999370..2999819 | - | 450 | WP_181545707.1 | DUF4128 domain-containing protein | - |
| HV229_RS14490 () | 2999809..3000408 | - | 600 | WP_181545708.1 | hypothetical protein | - |
| HV229_RS14495 () | 3000411..3000764 | - | 354 | WP_181491289.1 | hypothetical protein | - |
| HV229_RS14500 () | 3000766..3001248 | - | 483 | WP_181545709.1 | hypothetical protein | - |
| HV229_RS14505 () | 3001251..3001508 | - | 258 | WP_181545710.1 | hypothetical protein | - |
| HV229_RS14510 () | 3001548..3002687 | - | 1140 | WP_016156686.1 | hypothetical protein | - |
| HV229_RS14515 () | 3002705..3003457 | - | 753 | WP_016156687.1 | hypothetical protein | - |
| HV229_RS14520 () | 3003778..3004884 | - | 1107 | WP_181545711.1 | hypothetical protein | - |
| HV229_RS14525 () | 3004886..3006289 | - | 1404 | WP_181545712.1 | DUF4055 domain-containing protein | - |
| HV229_RS14530 () | 3006294..3007865 | - | 1572 | WP_047416709.1 | terminase | - |
| HV229_RS14535 () | 3007862..3008350 | - | 489 | WP_094543014.1 | DUF2280 domain-containing protein | - |
| HV229_RS14540 () | 3008382..3009020 | - | 639 | WP_019076560.1 | hypothetical protein | - |
| HV229_RS14545 () | 3009141..3009815 | - | 675 | WP_136398002.1 | Fur-regulated protein | - |
| HV229_RS14550 () | 3010230..3010754 | - | 525 | WP_181545713.1 | DUF2514 domain-containing protein | - |
| HV229_RS14555 () | 3010733..3011281 | - | 549 | WP_181545714.1 | lysozyme | - |
| HV229_RS14560 () | 3011253..3011531 | - | 279 | WP_181545715.1 | holin | - |
| HV229_RS14565 () | 3011690..3012205 | - | 516 | WP_048997996.1 | hypothetical protein | - |
| HV229_RS14570 () | 3012361..3013050 | - | 690 | WP_048997997.1 | antiterminator | - |
| HV229_RS14575 () | 3013047..3013184 | - | 138 | WP_181545716.1 | YlcG family protein | - |
| HV229_RS14580 () | 3013181..3013789 | - | 609 | WP_181545717.1 | recombination protein NinG | - |
| HV229_RS14585 () | 3013792..3013998 | - | 207 | WP_181545718.1 | hypothetical protein | - |
| HV229_RS14590 () | 3013998..3014597 | - | 600 | WP_049041767.1 | DUF1367 family protein | - |
| HV229_RS14595 () | 3014699..3014953 | - | 255 | WP_016156244.1 | hypothetical protein | - |
| HV229_RS14600 () | 3014953..3015210 | - | 258 | WP_181545719.1 | DNA polymerase III subunit theta | - |
| HV229_RS14605 () | 3015210..3015536 | - | 327 | WP_016156242.1 | hypothetical protein | - |
| HV229_RS14610 () | 3015630..3016196 | - | 567 | WP_181545720.1 | hypothetical protein | - |
| HV229_RS14615 () | 3016750..3016941 | - | 192 | WP_181547707.1 | hypothetical protein | - |
| HV229_RS14620 () | 3017049..3017591 | - | 543 | WP_181545722.1 | hypothetical protein | - |
| HV229_RS14625 () | 3017930..3018184 | - | 255 | Protein_2874 | hypothetical protein | - |
| HV229_RS14630 () | 3018181..3018492 | - | 312 | WP_049041807.1 | hypothetical protein | - |
| HV229_RS14635 () | 3018511..3019260 | - | 750 | WP_071687775.1 | ATP-binding protein | - |
| HV229_RS14640 () | 3019263..3020210 | - | 948 | WP_181545723.1 | hypothetical protein | - |
| HV229_RS14645 () | 3020378..3020917 | - | 540 | WP_181545724.1 | toxin YdaT domain-containing protein | - |
| HV229_RS14650 () | 3020943..3021164 | - | 222 | WP_181545725.1 | helix-turn-helix domain-containing protein | - |
| HV229_RS14655 () | 3021274..3021972 | + | 699 | WP_181547709.1 | helix-turn-helix transcriptional regulator | - |
| HV229_RS14660 () | 3022224..3022973 | + | 750 | WP_181545726.1 | hypothetical protein | - |
| HV229_RS14665 () | 3022970..3023797 | + | 828 | WP_181545727.1 | DUF3037 domain-containing protein | - |
| HV229_RS14670 () | 3023840..3024049 | - | 210 | WP_181545729.1 | hypothetical protein | - |
| HV229_RS14675 () | 3024477..3024692 | - | 216 | WP_039270078.1 | hypothetical protein | - |
| HV229_RS14680 () | 3024902..3025108 | + | 207 | WP_016156718.1 | hypothetical protein | - |
| HV229_RS14685 () | 3025120..3025281 | + | 162 | WP_057064861.1 | hypothetical protein | - |
| HV229_RS14690 () | 3025421..3028237 | + | 2817 | WP_181545731.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| HV229_RS14695 () | 3028249..3029295 | + | 1047 | WP_181547711.1 | recombinase RecT | - |
| HV229_RS14700 () | 3029335..3029577 | + | 243 | WP_047415379.1 | DUF4060 family protein | - |
| HV229_RS14705 () | 3029642..3029914 | + | 273 | WP_072034353.1 | excisionase | - |
| HV229_RS14710 () | 3029883..3030968 | + | 1086 | WP_047415377.1 | hypothetical protein ; Integrase | Integrase |
| - () | 3031044..3031184 | + | 141 | - | - | Antitoxin Detail |
| - () | 3031046..3031149 | - | 104 | - | - | Toxin Detail |
| HV229_RS14715 () | 3031305..3031643 | - | 339 | WP_115190683.1 | YebY family protein | - |
| HV229_RS14720 () | 3031664..3032536 | - | 873 | WP_049271209.1 | copper homeostasis membrane protein CopD | - |
| HV229_RS14725 () | 3032540..3032914 | - | 375 | WP_046276426.1 | CopC domain-containing protein YobA | - |
| HV229_RS14730 () | 3033058..3033288 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV229_RS14735 () | 3033395..3034051 | + | 657 | WP_049271204.1 | carbon-nitrogen hydrolase family protein | - |
| HV229_RS14740 () | 3034075..3034737 | + | 663 | WP_016152773.1 | exodeoxyribonuclease X | - |
| HV229_RS14745 () | 3034719..3036794 | - | 2076 | WP_172976638.1 | oligopeptidase B | - |
| HV229_RS14750 () | 3036881..3037540 | - | 660 | WP_016156220.1 | tellurite resistance TerB family protein | - |
| HV229_RS14755 () | 3037642..3037995 | - | 354 | WP_016152770.1 | hypothetical protein | - |
| HV229_RS14760 () | 3038117..3038407 | - | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| HV229_RS14765 () | 3038540..3039718 | + | 1179 | WP_181545733.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV229_RS14770 () | 3039785..3040426 | - | 642 | WP_016152768.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV229_RS14775 () | 3040461..3042272 | - | 1812 | WP_049271196.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|