MGE detailed information
MGE type: Prophage MGE length: 72355 bp
Accession: NZ_CP056232 Location: 2077972..2150326 Organism: Citrobacter freundii strain RHBSTW-00965 Replicon: chromosome
Accession: NZ_CP056232 Location: 2077972..2150326 Organism: Citrobacter freundii strain RHBSTW-00965 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV336_RS09690 () | 2074296..2074862 | + | 567 | WP_003034677.1 | VOC family protein | - |
| HV336_RS09695 () | 2074865..2075611 | + | 747 | WP_181510850.1 | copper homeostasis protein CutC | - |
| HV336_RS09700 () | 2075775..2076743 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| HV336_RS09705 () | 2076740..2077483 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| HV336_RS09710 () | 2077524..2077919 | - | 396 | WP_003833847.1 | MAPEG family protein | - |
| HV336_RS09715 () | 2077972..2078745 | - | 774 | WP_181511149.1 | DUF72 domain-containing protein | - |
| HV336_RS09720 () | 2078724..2080037 | - | 1314 | WP_047400034.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HV336_RS09725 () | 2080093..2080329 | - | 237 | WP_019077032.1 | excisionase family protein | - |
| HV336_RS09730 () | 2080339..2080488 | - | 150 | WP_181497892.1 | hypothetical protein | - |
| HV336_RS09735 () | 2080485..2080796 | - | 312 | WP_071684370.1 | hypothetical protein | - |
| HV336_RS09740 () | 2080796..2081425 | - | 630 | WP_071684371.1 | hypothetical protein | - |
| HV336_RS09745 () | 2081422..2081634 | - | 213 | WP_071684372.1 | hypothetical protein | - |
| HV336_RS09750 () | 2081631..2081855 | - | 225 | WP_142972741.1 | hypothetical protein | - |
| HV336_RS09755 () | 2081852..2082418 | - | 567 | WP_058660498.1 | hypothetical protein | - |
| HV336_RS09760 () | 2082415..2083164 | - | 750 | WP_071684374.1 | ORF6N domain-containing protein | - |
| HV336_RS09765 () | 2083177..2083695 | - | 519 | WP_071684383.1 | hypothetical protein | - |
| HV336_RS09770 () | 2083736..2084170 | - | 435 | WP_071684375.1 | hypothetical protein | - |
| HV336_RS09775 () | 2084357..2084608 | - | 252 | WP_181510851.1 | hypothetical protein | - |
| HV336_RS09780 () | 2084608..2084964 | - | 357 | WP_032948002.1 | hypothetical protein | - |
| HV336_RS09785 () | 2084970..2085353 | - | 384 | WP_181511238.1 | hypothetical protein | - |
| HV336_RS09790 () | 2085415..2085840 | - | 426 | WP_181510852.1 | hypothetical protein | - |
| HV336_RS09795 () | 2085837..2086028 | - | 192 | WP_048218896.1 | hypothetical protein | - |
| HV336_RS09800 () | 2086331..2086852 | - | 522 | WP_181510853.1 | helix-turn-helix domain-containing protein | - |
| HV336_RS09805 () | 2086941..2087354 | - | 414 | WP_053065179.1 | helix-turn-helix domain-containing protein | - |
| HV336_RS09810 () | 2087433..2087648 | + | 216 | WP_048217969.1 | hypothetical protein | - |
| HV336_RS09815 () | 2087756..2088004 | - | 249 | WP_048217968.1 | bssS family protein | - |
| HV336_RS09820 () | 2088453..2088674 | + | 222 | WP_048218893.1 | Lar family restriction alleviation protein | - |
| HV336_RS09825 () | 2088671..2088979 | + | 309 | WP_048217966.1 | hypothetical protein | - |
| HV336_RS09830 () | 2088976..2089977 | + | 1002 | WP_181510854.1 | replication protein | - |
| HV336_RS09835 () | 2089992..2090873 | + | 882 | WP_181510855.1 | ATP-binding protein | - |
| HV336_RS09840 () | 2090870..2092228 | + | 1359 | WP_181510856.1 | replicative DNA helicase | - |
| HV336_RS09845 () | 2092239..2093075 | + | 837 | WP_143113772.1 | antitermination protein | - |
| HV336_RS09850 () | 2093246..2093779 | + | 534 | WP_108961647.1 | hypothetical protein | - |
| HV336_RS09855 () | 2094224..2094502 | + | 279 | WP_001568784.1 | holin | - |
| HV336_RS09860 () | 2094474..2095022 | + | 549 | WP_108961646.1 | lysozyme | - |
| HV336_RS09865 () | 2095019..2095537 | + | 519 | WP_108961645.1 | DUF2514 domain-containing protein | - |
| HV336_RS09870 () | 2095663..2096130 | + | 468 | WP_181510857.1 | hypothetical protein | - |
| HV336_RS09875 () | 2096118..2096468 | + | 351 | WP_048217952.1 | HNH endonuclease | - |
| HV336_RS09880 () | 2096625..2097122 | + | 498 | WP_003841734.1 | phage terminase small subunit P27 family | - |
| HV336_RS09885 () | 2097122..2098879 | + | 1758 | WP_181510858.1 | terminase large subunit | - |
| HV336_RS09890 () | 2099027..2100253 | + | 1227 | WP_080100491.1 | phage portal protein | - |
| HV336_RS09895 () | 2100246..2100845 | + | 600 | WP_080100490.1 | HK97 family phage prohead protease | - |
| HV336_RS09900 () | 2100855..2102072 | + | 1218 | WP_080100489.1 | phage major capsid protein | - |
| HV336_RS09905 () | 2102151..2102468 | + | 318 | WP_080100488.1 | head-tail connector protein | - |
| HV336_RS09910 () | 2102478..2102816 | + | 339 | WP_181510859.1 | phage head closure protein | - |
| HV336_RS09915 () | 2102813..2103262 | + | 450 | WP_080100486.1 | HK97 gp10 family phage protein | - |
| HV336_RS09920 () | 2103259..2103606 | + | 348 | WP_080100485.1 | DUF3168 domain-containing protein | - |
| HV336_RS09925 () | 2103664..2104368 | + | 705 | WP_181510860.1 | immunoglobulin domain-containing protein | - |
| HV336_RS09930 () | 2104396..2104785 | + | 390 | WP_079970517.1 | phage tail assembly chaperone | - |
| HV336_RS09935 () | 2104794..2105072 | + | 279 | WP_079970516.1 | DUF4035 domain-containing protein | - |
| HV336_RS09940 () | 2105127..2105468 | + | 342 | WP_080100483.1 | hypothetical protein | - |
| HV336_RS09945 () | 2105527..2108829 | + | 3303 | WP_181510861.1 | phage tail tape measure protein | - |
| HV336_RS09950 () | 2108832..2109170 | + | 339 | WP_022648882.1 | phage tail protein | - |
| HV336_RS09955 () | 2109167..2109925 | + | 759 | WP_181510862.1 | phage minor tail protein L | - |
| HV336_RS09960 () | 2109928..2110638 | + | 711 | WP_129610158.1 | C40 family peptidase | - |
| HV336_RS09965 () | 2110638..2111237 | + | 600 | WP_181510863.1 | tail assembly protein | - |
| HV336_RS09970 () | 2111291..2114482 | + | 3192 | WP_181510864.1 | host specificity protein J | - |
| HV336_RS09975 () | 2114482..2114796 | + | 315 | WP_181510865.1 | hypothetical protein | - |
| HV336_RS09980 () | 2114797..2115471 | + | 675 | WP_181510866.1 | hypothetical protein | - |
| HV336_RS09985 () | 2115581..2115820 | + | 240 | WP_075262189.1 | cor protein | - |
| HV336_RS09990 () | 2116116..2117009 | + | 894 | WP_181511150.1 | tail fiber domain-containing protein | - |
| HV336_RS09995 () | 2117216..2117458 | - | 243 | WP_069325488.1 | DinI family protein | - |
| HV336_RS10000 () | 2117824..2118390 | - | 567 | WP_181510867.1 | hydrolase | - |
| HV336_RS10005 () | 2118678..2120450 | + | 1773 | WP_123267390.1 | aspartate--tRNA ligase | - |
| HV336_RS10010 () | 2120452..2120895 | + | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| HV336_RS10015 () | 2120924..2121667 | + | 744 | WP_003833836.1 | putative transcriptional regulatory protein YebC | VF |
| HV336_RS10020 () | 2121702..2122223 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HV336_RS10025 () | 2122304..2122915 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| HV336_RS10030 () | 2122924..2123934 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HV336_RS10035 () | 2124013..2124798 | - | 786 | WP_003034874.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| HV336_RS10040 () | 2124795..2125550 | - | 756 | WP_181510868.1 | Zinc import ATP-binding protein ZnuC | VF |
| HV336_RS10045 () | 2125629..2126573 | + | 945 | WP_043017940.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HV336_RS10050 () | 2126589..2127908 | + | 1320 | WP_149384875.1 | murein DD-endopeptidase MepM | - |
| HV336_RS10055 () | 2128028..2128999 | + | 972 | WP_181510869.1 | Lipid A biosynthesis myristoyltransferase | VF |
| HV336_RS10060 () | 2129046..2130488 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| HV336_RS10065 () | 2130608..2131477 | - | 870 | WP_181511151.1 | MurR/RpiR family transcriptional regulator | - |
| HV336_RS10070 () | 2131845..2133320 | + | 1476 | WP_153687342.1 | glucose-6-phosphate dehydrogenase | - |
| HV336_RS10075 () | 2133554..2135365 | + | 1812 | WP_181510870.1 | phosphogluconate dehydratase | - |
| HV336_RS10080 () | 2135400..2136041 | + | 642 | WP_181510871.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV336_RS10085 () | 2136109..2137287 | - | 1179 | WP_181510872.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV336_RS10090 () | 2137420..2137710 | + | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| HV336_RS10095 () | 2137832..2138185 | + | 354 | WP_126957912.1 | hypothetical protein | - |
| HV336_RS10100 () | 2138280..2138939 | + | 660 | WP_079939893.1 | tellurite resistance TerB family protein | - |
| HV336_RS10105 () | 2139026..2141080 | + | 2055 | WP_181510873.1 | oligopeptidase B | - |
| HV336_RS10110 () | 2141071..2141733 | - | 663 | WP_181510874.1 | exodeoxyribonuclease X | - |
| HV336_RS10115 () | 2141757..2142413 | - | 657 | WP_181510875.1 | carbon-nitrogen hydrolase family protein | - |
| HV336_RS10120 () | 2142520..2142750 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| HV336_RS10125 () | 2142894..2143268 | + | 375 | WP_123267385.1 | CopC domain-containing protein YobA | - |
| HV336_RS10130 () | 2143272..2144144 | + | 873 | WP_181510876.1 | copper homeostasis membrane protein CopD | - |
| HV336_RS10135 () | 2144165..2144503 | + | 339 | WP_003833793.1 | YebY family protein | - |
| - () | 2144624..2144767 | - | 144 | - | - | Antitoxin Detail |
| - () | 2144659..2144762 | + | 104 | - | - | Toxin Detail |
| HV336_RS10140 () | 2144916..2145557 | + | 642 | WP_181510877.1 | protein-serine/threonine phosphatase | - |
| HV336_RS10145 () | 2145558..2145749 | - | 192 | WP_181511152.1 | YebW family protein | - |
| HV336_RS10150 () | 2145852..2146088 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| HV336_RS10155 () | 2146189..2147634 | - | 1446 | WP_181511153.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV336_RS10160 () | 2147693..2150326 | - | 2634 | WP_181510878.1 | hypothetical protein | VF |
| HV336_RS10165 () | 2150295..2151578 | - | 1284 | WP_181510879.1 | membrane integrity lipid transport subunit YebS | - |
| HV336_RS10170 () | 2151707..2152204 | + | 498 | WP_181510880.1 | GAF domain-containing protein | - |
| HV336_RS10175 () | 2152301..2152987 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| HV336_RS10180 () | 2153007..2155055 | + | 2049 | WP_181510881.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|