MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 46003 bp
Accession: NZ_CP056167 Location: 1..46003 Organism: Escherichia marmotae strain RHBSTW-00777 Replicon: plasmid pRHBSTW-00777_3
Accession: NZ_CP056167 Location: 1..46003 Organism: Escherichia marmotae strain RHBSTW-00777 Replicon: plasmid pRHBSTW-00777_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV276_RS23520 () | 1..1005 | + | 1005 | WP_053528593.1 | replication initiation protein | - |
| HV276_RS23525 () | 1491..1829 | - | 339 | WP_000612441.1 | hypothetical protein | VF |
| HV276_RS23530 () | 2028..2315 | + | 288 | WP_172811845.1 | helix-turn-helix transcriptional regulator | - |
| HV276_RS23535 () | 2356..2589 | - | 234 | WP_001056371.1 | EexN family lipoprotein | - |
| HV276_RS23540 () | 2602..3243 | - | 642 | WP_000844300.1 | conjugal transfer protein TrbJ | - |
| HV276_RS23545 () | 3245..4240 | - | 996 | WP_001103652.1 | type IV secretion system protein | - |
| HV276_RS23550 () | 4573..5184 | + | 612 | WP_080193889.1 | Type IV secretion system protein virB1 | VF |
| HV276_RS23555 () | 5177..5470 | + | 294 | WP_001031683.1 | TrbC/VirB2 family protein | - |
| HV276_RS23560 () | 5528..5848 | + | 321 | WP_001000142.1 | VirB3 family type IV secretion system protein | - |
| HV276_RS23565 () | 5851..8223 | + | 2373 | WP_181503406.1 | conjugal transfer protein | - |
| HV276_RS23570 () | 8354..9091 | + | 738 | WP_181503407.1 | type IV secretion system protein | - |
| HV276_RS23575 () | 9088..9867 | + | 780 | WP_181503408.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HV276_RS23580 () | 9857..10999 | + | 1143 | WP_181503409.1 | Type IV secretion system protein virB10 | VF |
| HV276_RS23585 () | 10999..12018 | + | 1020 | WP_001287983.1 | Type IV secretion system protein VirB11 | VF |
| HV276_RS23590 () | 12069..14036 | + | 1968 | WP_089634063.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HV276_RS23595 () | 14052..14357 | + | 306 | WP_001223992.1 | IncN plasmid KikA protein | - |
| HV276_RS23600 () | 14458..15720 | + | 1263 | WP_181503410.1 | YadA-like family protein | - |
| HV276_RS23605 () | 15750..15977 | + | 228 | WP_000855410.1 | hypothetical protein | - |
| HV276_RS23610 () | 16102..16689 | + | 588 | WP_181503411.1 | hypothetical protein | - |
| HV276_RS23615 () | 16701..18857 | + | 2157 | WP_181503412.1 | type IA DNA topoisomerase | - |
| HV276_RS23620 () | 18996..19259 | + | 264 | WP_181503413.1 | hypothetical protein | - |
| HV276_RS23625 () | 20118..20633 | + | 516 | WP_000528103.1 | hypothetical protein | - |
| HV276_RS23630 () | 20623..20958 | - | 336 | WP_181503414.1 | hypothetical protein | - |
| HV276_RS23635 () | 21327..22100 | - | 774 | WP_181503415.1 | hypothetical protein | - |
| HV276_RS23640 () | 22245..22694 | + | 450 | WP_000238252.1 | hypothetical protein | - |
| HV276_RS23645 () | 22809..23093 | - | 285 | WP_112020943.1 | hypothetical protein | - |
| HV276_RS23650 () | 23327..23863 | - | 537 | WP_181503399.1 | hypothetical protein | - |
| HV276_RS23655 () | 24008..24289 | + | 282 | WP_112020936.1 | hypothetical protein | - |
| HV276_RS23660 () | 24907..25863 | + | 957 | WP_001281417.1 | Abi family protein | - |
| HV276_RS23665 () | 25980..26771 | - | 792 | WP_181503400.1 | malate dehydrogenase | - |
| HV276_RS23670 () | 27163..27507 | + | 345 | WP_181503401.1 | hypothetical protein | - |
| HV276_RS23675 () | 29083..29364 | + | 282 | WP_089552074.1 | hypothetical protein | - |
| HV276_RS23680 () | 29722..31173 | + | 1452 | WP_181503402.1 | AAA family ATPase | - |
| HV276_RS23685 () | 31175..31804 | + | 630 | WP_181503403.1 | hypothetical protein | - |
| HV276_RS23690 () | 32198..33013 | + | 816 | WP_074568656.1 | Tyrosine recombinase XerD | VF |
| HV276_RS23695 () | 33128..33787 | + | 660 | WP_021558909.1 | hypothetical protein | - |
| HV276_RS23700 () | 34492..34794 | + | 303 | WP_001096504.1 | hypothetical protein | - |
| HV276_RS23705 () | 34872..38069 | - | 3198 | WP_181503404.1 | relaxase | - |
| HV276_RS23710 () | 38066..38401 | - | 336 | WP_000963832.1 | hypothetical protein | Relaxase |
| HV276_RS23715 () | 38770..39171 | + | 402 | WP_181503405.1 | zinc transporter | - |
| HV276_RS23720 () | 39189..39950 | + | 762 | WP_075319719.1 | conjugal transfer protein TraL | - |
| HV276_RS23725 () | 39947..40651 | + | 705 | WP_080171974.1 | hypothetical protein | - |
| HV276_RS23730 () | 40680..41117 | - | 438 | WP_000466317.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HV276_RS23735 () | 41142..41324 | - | 183 | WP_000833471.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HV276_RS23740 () | 41758..42036 | - | 279 | WP_000545934.1 | hypothetical protein | - |
| HV276_RS23745 () | 42094..42423 | - | 330 | WP_000387851.1 | hypothetical protein | - |
| HV276_RS23750 () | 42863..43105 | - | 243 | WP_001704452.1 | transcriptional regulator | - |
| HV276_RS23755 () | 43095..43361 | - | 267 | WP_000868277.1 | hypothetical protein | - |
| HV276_RS23760 () | 43412..43636 | - | 225 | WP_000749828.1 | hypothetical protein | - |
| HV276_RS23765 () | 43732..43956 | - | 225 | WP_053528582.1 | hypothetical protein | - |
| HV276_RS23770 () | 43997..44320 | - | 324 | WP_080193904.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|