MGE detailed information
MGE type: Conjugative plasmid MGE length: 112380 bp
Accession: NZ_CP055601 Location: 1..112380 Organism: Escherichia fergusonii strain RHB41-C23 Replicon: plasmid pRHB41-C23_3
Accession: NZ_CP055601 Location: 1..112380 Organism: Escherichia fergusonii strain RHB41-C23 Replicon: plasmid pRHB41-C23_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV014_RS22535 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| HV014_RS22540 () | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| HV014_RS22545 () | 2100..2900 | - | 801 | Protein_2 | IS91 family transposase ISSbo1 | Transposase |
| HV014_RS22550 () | 2999..5965 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HV014_RS22555 () | 5969..6529 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HV014_RS22560 () | 6705..7055 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HV014_RS22565 () | 7258..8271 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HV014_RS22570 () | 8428..8901 | + | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| HV014_RS22575 () | 8994..9296 | + | 303 | Protein_8 | nucleotidyltransferase domain-containing protein | - |
| HV014_RS22580 () | 9445..10305 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HV014_RS22585 () | 10488..11045 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HV014_RS22590 () | 11209..14214 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HV014_RS22595 () | 14247..14660 | - | 414 | Protein_12 | IS91 family transposase ISSbo1 | Transposase |
| HV014_RS22600 () | 14641..14913 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| HV014_RS22605 () | 15128..15943 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HV014_RS22610 () | 16030..16272 | + | 243 | Protein_15 | phosphoglucosamine mutase | - |
| HV014_RS22615 () | 16226..16477 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| HV014_RS22620 () | 16508..17644 | - | 1137 | WP_023140202.1 | IS91 family transposase ISVsa3 | Transposase |
| HV014_RS22625 () | 18011..18280 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HV014_RS22630 () | 18277..18558 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HV014_RS22635 () | 18598..19446 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| HV014_RS22640 () | 19563..20036 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| HV014_RS22645 () | 20513..20779 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| HV014_RS22650 () | 20779..21273 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| HV014_RS22655 () | 21329..21931 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| HV014_RS22660 () | 22285..23631 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| HV014_RS22665 () | 23910..25790 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| HV014_RS22670 () | 25808..26155 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| HV014_RS22675 () | 26274..26622 | + | 349 | Protein_28 | hypothetical protein | - |
| HV014_RS22680 () | 26642..27232 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| HV014_RS22685 () | 27232..27489 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| HV014_RS22690 () | 27840..28841 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| HV014_RS22695 () | 29017..29361 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| HV014_RS22700 () | 29860..30114 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| HV014_RS22705 () | 30159..31085 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| HV014_RS22710 () | 31617..32030 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| HV014_RS22715 () | 32032..32811 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| HV014_RS22720 () | 32991..33635 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HV014_RS22725 () | 33722..34030 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HV014_RS22730 () | 34444..35424 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HV014_RS22735 () | 35417..35833 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HV014_RS22740 () | 35835..36497 | - | 663 | Protein_41 | DUF4113 domain-containing protein | - |
| HV014_RS22745 () | 36558..37355 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| HV014_RS22750 () | 37355..38527 | - | 1173 | WP_058800785.1 | IS21 family transposase IS21 | Transposase |
| HV014_RS22755 () | 38621..39244 | - | 624 | Protein_44 | protein ImpB | - |
| HV014_RS22760 () | 39244..39681 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV014_RS22765 () | 39678..39926 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HV014_RS22770 () | 40344..41246 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| HV014_RS22775 () | 41243..41554 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| HV014_RS22780 () | 41631..42314 | + | 684 | WP_000086178.1 | DNA methylase | - |
| HV014_RS22785 () | 42315..42536 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| HV014_RS22790 () | 42548..42982 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| HV014_RS22795 () | 43033..43803 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| HV014_RS22800 () | 44344..44646 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| HV014_RS22805 () | 44693..45115 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| HV014_RS22810 () | 45112..45303 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| HV014_RS22815 () | 45636..45704 | - | 69 | Protein_56 | pilus protein | - |
| HV014_RS22820 () | 46073..46600 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| HV014_RS22825 () | 46658..46891 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| HV014_RS22830 () | 46950..48908 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| HV014_RS22835 () | 48963..49397 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HV014_RS22840 () | 49394..50113 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| HV014_RS22845 () | 50110..50706 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| HV014_RS22850 () | 51169..51669 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| HV014_RS22855 () | 52398..52832 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| HV014_RS22860 () | 52924..53190 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HV014_RS22865 () | 53255..54196 | + | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| HV014_RS22870 () | 54258..54428 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| HV014_RS22875 () | 54459..54710 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HV014_RS22880 () | 54744..54941 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| HV014_RS22885 () | 55376..56548 | + | 1173 | WP_058800785.1 | IS21 family transposase IS21 | Transposase |
| HV014_RS22890 () | 56548..57345 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| HV014_RS22895 () | 57425..58273 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| HV014_RS22900 () | 58358..58693 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| HV014_RS22905 () | 58927..59259 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HV014_RS22910 () | 59270..61969 | + | 2700 | WP_024143648.1 | Protein TraI | Relaxase |
| HV014_RS22915 () | 62006..64297 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| HV014_RS22920 () | 64290..65360 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HV014_RS22925 () | 65379..66587 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| HV014_RS22930 () | 66805..67791 | - | 987 | WP_001257838.1 | hypothetical protein | - |
| - () | 67952..68007 | - | 56 | NuclAT_1 | - | - |
| - () | 67952..68007 | - | 56 | NuclAT_1 | - | - |
| - () | 67952..68007 | - | 56 | NuclAT_1 | - | - |
| - () | 67952..68007 | - | 56 | NuclAT_1 | - | - |
| - () | 68248..68305 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68248..68305 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68248..68305 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68248..68305 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| HV014_RS22935 () | 68360..68512 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| HV014_RS22940 () | 68584..68835 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| HV014_RS22945 () | 69494..69670 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| HV014_RS22950 () | 69879..70088 | - | 210 | WP_052939150.1 | hemolysin expression modulator Hha | - |
| HV014_RS22955 () | 70186..70800 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HV014_RS22960 () | 70876..73044 | - | 2169 | WP_063267537.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| HV014_RS22965 () | 73141..73725 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| HV014_RS22970 () | 73754..74956 | - | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| HV014_RS22975 () | 74923..75537 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| HV014_RS22980 () | 75537..78581 | - | 3045 | WP_129753780.1 | IncI1-type conjugal transfer protein TraU | - |
| HV014_RS22985 () | 78671..79471 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HV014_RS22990 () | 79455..79643 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HV014_RS22995 () | 79707..80111 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| HV014_RS23000 () | 80162..80689 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HV014_RS23005 () | 80689..81393 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HV014_RS23010 () | 81393..82682 | - | 1290 | WP_001774189.1 | conjugal transfer protein TraO | - |
| HV014_RS23015 () | 82685..83668 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| HV014_RS23020 () | 83679..84371 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| HV014_RS23025 () | 84368..84715 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HV014_RS23030 () | 84733..88500 | - | 3768 | WP_001141534.1 | DNA primase | - |
| HV014_RS23035 () | 88590..89141 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| HV014_RS23040 () | 89156..89446 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| HV014_RS23045 () | 89443..90591 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| HV014_RS23050 () | 90588..91406 | - | 819 | WP_052962236.1 | hypothetical protein | VF |
| HV014_RS23055 () | 91403..91861 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| HV014_RS23060 () | 92256..92840 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HV014_RS23065 () | 92900..94102 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| HV014_RS23070 () | 94188..95012 | - | 825 | WP_001545755.1 | hypothetical protein | - |
| HV014_RS23075 () | 95163..96317 | - | 1155 | WP_001139958.1 | integrase | - |
| HV014_RS23080 () | 96445..96600 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| HV014_RS23085 () | 97136..98464 | - | 1329 | WP_069057437.1 | hypothetical protein | VF |
| HV014_RS23090 () | 98464..99120 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| HV014_RS23095 () | 99105..99665 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| HV014_RS23100 () | 99675..100289 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| HV014_RS23105 () | 100306..101391 | - | 1086 | WP_129753666.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HV014_RS23110 () | 101404..102957 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HV014_RS23115 () | 102968..103420 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| HV014_RS23120 () | 103407..104702 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| HV014_RS23125 () | 104695..106377 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HV014_RS23130 () | 106391..106828 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| HV014_RS23135 () | 106828..107895 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| HV014_RS23140 () | 108647..108901 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HV014_RS23145 () | 109073..109756 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| HV014_RS23150 () | 110010..110543 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| HV014_RS23155 () | 110985..111272 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HV014_RS23160 () | 111190..111453 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|