MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 113051 bp
Accession: NZ_CP055600 Location: 1..113051 Organism: Escherichia fergusonii strain RHB41-C23 Replicon: plasmid pRHB41-C23_2
Accession: NZ_CP055600 Location: 1..113051 Organism: Escherichia fergusonii strain RHB41-C23 Replicon: plasmid pRHB41-C23_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV014_RS21935 () | 412..567 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| HV014_RS21940 () | 749..994 | - | 246 | WP_002433487.1 | hypothetical protein | - |
| HV014_RS21945 () | 1045..1890 | - | 846 | WP_104920437.1 | Replication protein repL | - |
| HV014_RS21950 () | 1920..2720 | - | 801 | WP_104920438.1 | phage antirepressor KilAC domain-containing protein | - |
| HV014_RS21955 () | 2885..3928 | - | 1044 | WP_181199410.1 | phage antirepressor KilAC domain-containing protein | - |
| HV014_RS21960 () | 3925..4146 | - | 222 | WP_000245709.1 | host cell division inhibitor Icd-like protein | - |
| HV014_RS21965 () | 4768..5280 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| HV014_RS21970 () | 5284..5823 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| HV014_RS21975 () | 5904..6470 | + | 567 | WP_001615634.1 | hypothetical protein | - |
| HV014_RS21980 () | 6481..7092 | + | 612 | WP_000523976.1 | hypothetical protein | - |
| HV014_RS21985 () | 7107..7616 | + | 510 | Protein_11 | morphogenetic protein | - |
| HV014_RS21990 () | 7616..8740 | + | 1125 | Protein_12 | bleomycin hydrolase | - |
| HV014_RS21995 () | 8740..9576 | + | 837 | WP_001189833.1 | hypothetical protein | - |
| HV014_RS22000 () | 9655..10089 | + | 435 | WP_097456305.1 | phage tail protein | - |
| HV014_RS22005 () | 10101..12524 | + | 2424 | WP_181199411.1 | tail fiber protein | - |
| HV014_RS22010 () | 12535..13059 | + | 525 | WP_171882194.1 | tail fiber assembly protein | - |
| HV014_RS22015 () | 13100..13525 | - | 426 | WP_171882195.1 | tail fiber assembly protein | - |
| HV014_RS22020 () | 13651..14025 | + | 375 | Protein_18 | phage tail protein | - |
| HV014_RS22025 () | 14041..14583 | - | 543 | WP_032243068.1 | serine acetyltransferase | - |
| HV014_RS22030 () | 14823..15059 | - | 237 | Protein_20 | recombinase family protein | - |
| HV014_RS22035 () | 15188..15451 | + | 264 | WP_130261310.1 | hypothetical protein | - |
| HV014_RS22040 () | 15526..15855 | + | 330 | WP_000887652.1 | holin | - |
| HV014_RS22045 () | 15852..16295 | + | 444 | WP_000580772.1 | hypothetical protein | - |
| HV014_RS22050 () | 16282..16884 | + | 603 | WP_000164724.1 | hypothetical protein | - |
| HV014_RS22055 () | 16886..18805 | + | 1920 | WP_181199412.1 | hypothetical protein | - |
| HV014_RS22060 () | 18802..19167 | + | 366 | WP_000175483.1 | hypothetical protein | - |
| HV014_RS22065 () | 19591..20868 | + | 1278 | WP_002431877.1 | hypothetical protein | - |
| HV014_RS22070 () | 20858..21166 | + | 309 | WP_001165936.1 | hypothetical protein | - |
| HV014_RS22075 () | 21278..21883 | - | 606 | WP_181199413.1 | hypothetical protein | - |
| HV014_RS22080 () | 22517..23629 | + | 1113 | WP_000724559.1 | porin OmpC | - |
| HV014_RS22085 () | 24019..24507 | - | 489 | WP_181199414.1 | single-stranded DNA-binding protein | - |
| HV014_RS22090 () | 24676..25233 | + | 558 | WP_024256768.1 | lysozyme | - |
| HV014_RS22095 () | 25525..26544 | - | 1020 | WP_000132937.1 | head processing protein | - |
| HV014_RS22100 () | 26537..28246 | - | 1710 | WP_181199415.1 | phage portal protein | - |
| HV014_RS22105 () | 28322..35089 | + | 6768 | WP_181199416.1 | N-6 DNA methylase | - |
| HV014_RS22110 () | 35123..35563 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| HV014_RS22115 () | 35560..35808 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| HV014_RS22120 () | 35847..36569 | - | 723 | WP_181199417.1 | helix-turn-helix domain-containing protein | - |
| HV014_RS22125 () | 36804..37492 | + | 689 | Protein_39 | EAL domain-containing protein | - |
| HV014_RS22130 () | 37546..38301 | - | 756 | WP_170998677.1 | hypothetical protein | - |
| HV014_RS22135 () | 38380..38766 | - | 387 | WP_072262119.1 | Ref family protein | - |
| HV014_RS22140 () | 38985..39761 | + | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| HV014_RS22145 () | 39777..40766 | + | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| HV014_RS22150 () | 40775..41176 | + | 402 | Protein_44 | ester cyclase | - |
| HV014_RS22155 () | 41283..41922 | - | 640 | Protein_45 | recombinase family protein | - |
| HV014_RS22160 () | 41971..42078 | + | 108 | WP_071595431.1 | Tn3 family transposase | - |
| HV014_RS22165 () | 42271..42582 | - | 312 | WP_171882174.1 | lysogeny establishment protein | - |
| HV014_RS22170 () | 42633..43664 | - | 1032 | WP_181199418.1 | site-specific integrase | - |
| HV014_RS22175 () | 43672..43893 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| HV014_RS22180 () | 44498..44707 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| HV014_RS22185 () | 44818..45669 | + | 852 | WP_181199419.1 | hypothetical protein | - |
| HV014_RS22190 () | 45694..47178 | - | 1485 | WP_181199420.1 | terminase | - |
| HV014_RS22195 () | 47178..48371 | - | 1194 | WP_181199421.1 | terminase | - |
| HV014_RS22200 () | 48458..48910 | - | 453 | WP_181199422.1 | Late promoter-activating protein | - |
| HV014_RS22205 () | 48999..50042 | - | 1044 | WP_181199423.1 | DUF968 domain-containing protein | - |
| HV014_RS22210 () | 50070..50249 | - | 180 | WP_000113019.1 | hypothetical protein | - |
| HV014_RS22215 () | 50254..50634 | - | 381 | WP_001216044.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HV014_RS22220 () | 50634..50855 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HV014_RS22225 () | 51241..52221 | - | 981 | WP_181199424.1 | IS5 family transposase ISKpn26 | Transposase |
| HV014_RS22230 () | 52484..53872 | + | 1389 | WP_001207923.1 | nitrate/nitrite transporter NarU | - |
| HV014_RS22235 () | 53967..57707 | + | 3741 | WP_002431872.1 | nitrate reductase Z subunit alpha | - |
| HV014_RS22240 () | 57704..59248 | + | 1545 | WP_000702558.1 | nitrate reductase subunit beta | - |
| HV014_RS22245 () | 59248..59943 | + | 696 | WP_001166374.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| HV014_RS22250 () | 59940..60620 | + | 681 | WP_000617115.1 | respiratory nitrate reductase subunit gamma | - |
| HV014_RS22255 () | 60700..61593 | + | 894 | WP_000804358.1 | putative isomerase YddE | VF |
| HV014_RS22260 () | 61689..61820 | - | 132 | WP_000157804.1 | hypothetical protein | - |
| HV014_RS22265 () | 61882..62579 | + | 698 | Protein_67 | IS1 family transposase | - |
| HV014_RS22270 () | 62953..64215 | - | 1263 | WP_104920464.1 | hypothetical protein | - |
| HV014_RS22275 () | 64517..65218 | - | 702 | WP_000684845.1 | hypothetical protein | - |
| HV014_RS22280 () | 65215..65892 | - | 678 | WP_181199406.1 | metallophosphoesterase | - |
| HV014_RS22285 () | 66182..69148 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HV014_RS22290 () | 69152..69712 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HV014_RS22295 () | 69888..70238 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HV014_RS22300 () | 70441..71454 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HV014_RS22305 () | 71603..72394 | + | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| HV014_RS22310 () | 72558..72905 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| HV014_RS22315 () | 72899..73738 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| HV014_RS22320 () | 73866..74366 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| HV014_RS22325 () | 74542..75327 | - | 786 | WP_000983249.1 | IS21 family transposase IS1326 | Transposase |
| HV014_RS22330 () | 75314..76837 | - | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| HV014_RS22335 () | 76960..78504 | + | 1545 | WP_000287615.1 | IS3 family transposase IS1353 | Transposase |
| HV014_RS22340 () | 78555..79415 | - | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| HV014_RS22345 () | 79418..81097 | - | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| HV014_RS22350 () | 81172..81840 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| HV014_RS22355 () | 81876..82112 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| HV014_RS22360 () | 82109..82471 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| HV014_RS22365 () | 82489..84183 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| HV014_RS22370 () | 84235..84657 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| HV014_RS22375 () | 84693..84968 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| HV014_RS22380 () | 84982..85332 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| HV014_RS22385 () | 85404..85838 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| HV014_RS22390 () | 85871..86668 | + | 798 | Protein_92 | Methyl-accepting chemotaxis protein McpQ | VF |
| HV014_RS22395 () | 86858..87229 | - | 372 | Protein_93 | norphogenetic protein | - |
| HV014_RS22400 () | 87731..87886 | - | 156 | WP_000095380.1 | hypothetical protein | - |
| HV014_RS22405 () | 87953..88531 | - | 579 | WP_000943606.1 | VRR-NUC domain-containing protein | - |
| HV014_RS22410 () | 88534..88779 | - | 246 | WP_000840930.1 | hypothetical protein | - |
| HV014_RS22415 () | 88926..89303 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| HV014_RS22420 () | 89313..90530 | + | 1218 | WP_001141897.1 | hypothetical protein | - |
| HV014_RS22425 () | 90534..91262 | + | 729 | WP_181199407.1 | phage tail protein | - |
| HV014_RS22430 () | 91249..92034 | + | 786 | WP_000602714.1 | hypothetical protein | - |
| HV014_RS22435 () | 92036..93052 | + | 1017 | WP_119188396.1 | phage tail tape measure protein | - |
| HV014_RS22440 () | 93045..93653 | + | 609 | WP_000535211.1 | hypothetical protein | - |
| HV014_RS22445 () | 93771..94103 | + | 333 | WP_000214385.1 | hypothetical protein | - |
| HV014_RS22450 () | 94157..94867 | + | 711 | WP_000194035.1 | hypothetical protein | - |
| HV014_RS22455 () | 94830..95300 | - | 471 | WP_002433497.1 | hypothetical protein | - |
| HV014_RS22465 () | 96594..99635 | - | 3042 | WP_181199408.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| HV014_RS22470 () | 99632..100537 | - | 906 | WP_061355005.1 | recombination-associated protein RdgC | - |
| HV014_RS22475 () | 100530..100814 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| HV014_RS22480 () | 101277..102065 | + | 789 | WP_095530532.1 | hypothetical protein | - |
| HV014_RS22485 () | 102105..102527 | + | 423 | WP_000007772.1 | hypothetical protein | - |
| HV014_RS22490 () | 102705..103097 | + | 393 | WP_001281120.1 | hypothetical protein | - |
| HV014_RS22495 () | 103432..104316 | + | 885 | WP_001113737.1 | RepB family plasmid replication initiator protein | - |
| HV014_RS22500 () | 104609..105418 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| HV014_RS22505 () | 105587..106783 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| HV014_RS22510 () | 106800..107801 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| HV014_RS22515 () | 108027..109733 | + | 1707 | WP_181199409.1 | hypothetical protein | - |
| HV014_RS22520 () | 109794..111383 | + | 1590 | WP_129964597.1 | hypothetical protein | - |
| HV014_RS22525 () | 111393..112208 | + | 816 | WP_000041758.1 | hypothetical protein | - |
| HV014_RS22530 () | 112244..112825 | + | 582 | WP_000035249.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|