MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP055219 Location: 3349388..3358739 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Accession: NZ_CP055219 Location: 3349388..3358739 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ41_RS16475 (3346119) | 3346119..3346838 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| HUZ41_RS16480 (3346835) | 3346835..3348466 | - | 1632 | WP_087893643.1 | sensor histidine kinase | - |
| HUZ41_RS16485 (3348647) | 3348647..3348877 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| HUZ41_RS16490 (3348889) | 3348889..3349161 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| HUZ41_RS16495 (3349388) | 3349388..3349684 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HUZ41_RS16500 (3349712) | 3349712..3349885 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HUZ41_RS16505 (3350004) | 3350004..3351521 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HUZ41_RS16510 (3351758) | 3351758..3353215 | - | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| HUZ41_RS16515 (3353274) | 3353274..3355421 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HUZ41_RS16520 (3355501) | 3355501..3356835 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HUZ41_RS16525 (3357201) | 3357201..3358739 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HUZ41_RS16535 (3359538) | 3359538..3360113 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| HUZ41_RS16540 (3360150) | 3360150..3361847 | - | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| HUZ41_RS16545 (3361823) | 3361823..3362161 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| HUZ41_RS16550 (3362277) | 3362277..3363578 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|