MGE detailed information
MGE type: Genomic_island MGE length: 9947 bp
Accession: NZ_CP055219 Location: 2240076..2250022 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Accession: NZ_CP055219 Location: 2240076..2250022 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ41_RS11115 (2235909) | 2235909..2237240 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HUZ41_RS11120 (2237262) | 2237262..2238251 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HUZ41_RS11125 (2238350) | 2238350..2239288 | - | 939 | WP_239637147.1 | transcriptional regulator TdcA | - |
| HUZ41_RS11130 (2239602) | 2239602..2239820 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| HUZ41_RS11135 (2240076) | 2240076..2240614 | + | 539 | Protein_2194 | protein YhaB | - |
| HUZ41_RS11140 (2240636) | 2240636..2241823 | + | 1188 | WP_024238569.1 | YhaC family protein | - |
| HUZ41_RS11150 (2242846) | 2242846..2243991 | - | 1146 | WP_001424370.1 | glycerate 2-kinase | - |
| HUZ41_RS11155 (2244088) | 2244088..2244978 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HUZ41_RS11160 (2245008) | 2245008..2245778 | - | 771 | WP_001723934.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HUZ41_RS11165 (2245794) | 2245794..2247128 | - | 1335 | WP_001723935.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HUZ41_RS11170 (2247503) | 2247503..2249074 | + | 1572 | WP_001723936.1 | galactarate dehydratase | - |
| HUZ41_RS11175 (2249223) | 2249223..2249558 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HUZ41_RS11180 (2249558) | 2249558..2250022 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HUZ41_RS11185 (2250077) | 2250077..2250886 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HUZ41_RS11190 (2251135) | 2251135..2252415 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HUZ41_RS11195 (2252438) | 2252438..2252911 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HUZ41_RS11200 (2252922) | 2252922..2253701 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HUZ41_RS11205 (2253691) | 2253691..2254569 | + | 879 | WP_001300474.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HUZ41_RS11210 (2254587) | 2254587..2255021 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|