MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 126719 bp
Accession: NZ_CP055090 Location: 1..126719 Organism: Citrobacter portucalensis strain SWHIN_111 Replicon: plasmid unnamed1
Accession: NZ_CP055090 Location: 1..126719 Organism: Citrobacter portucalensis strain SWHIN_111 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ88_RS24350 (HUZ88_24280) | 1304..2044 | - | 741 | WP_022652310.1 | site-specific integrase | - |
| HUZ88_RS24355 (HUZ88_24285) | 2521..2828 | + | 308 | Protein_2 | IS1-like element transposase | - |
| HUZ88_RS24360 (HUZ88_24290) | 3120..4142 | - | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| HUZ88_RS24365 (HUZ88_24295) | 4649..6127 | + | 1479 | WP_022652309.1 | SulP family inorganic anion transporter | - |
| HUZ88_RS24370 (HUZ88_24300) | 6145..6972 | + | 828 | WP_032430841.1 | universal stress protein | - |
| HUZ88_RS24375 (HUZ88_24305) | 7054..7257 | + | 204 | WP_022652307.1 | hypothetical protein | - |
| HUZ88_RS24380 (HUZ88_24310) | 7535..7765 | - | 231 | WP_021314637.1 | thioredoxin family protein | - |
| HUZ88_RS24385 (HUZ88_24315) | 7779..8747 | - | 969 | WP_225986354.1 | permease | - |
| HUZ88_RS24390 (HUZ88_24320) | 8937..9479 | - | 543 | WP_022652305.1 | sigma-70 family RNA polymerase sigma factor | - |
| HUZ88_RS24395 (HUZ88_24325) | 10037..10990 | - | 954 | WP_032430842.1 | IS110 family transposase IS4321 | Transposase |
| HUZ88_RS24400 (HUZ88_24330) | 11055..11582 | - | 528 | WP_022652301.1 | hypothetical protein | - |
| HUZ88_RS24405 (HUZ88_24335) | 11611..12321 | - | 711 | WP_022652302.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| HUZ88_RS24410 (HUZ88_24340) | 12323..13528 | - | 1206 | WP_022652303.1 | ABC transporter permease | - |
| HUZ88_RS24415 (HUZ88_24345) | 13525..14676 | - | 1152 | WP_032430843.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HUZ88_RS24420 (HUZ88_24350) | 14673..15281 | - | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| HUZ88_RS24425 (HUZ88_24355) | 15469..16473 | + | 1005 | WP_022542389.1 | IS110 family transposase IS4321 | Transposase |
| HUZ88_RS24430 (HUZ88_24360) | 17077..17406 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HUZ88_RS24435 (HUZ88_24365) | 17387..17668 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| HUZ88_RS24440 (HUZ88_24370) | 17946..18926 | + | 981 | WP_047715662.1 | IS5 family transposase ISKpn26 | Transposase |
| HUZ88_RS24450 (HUZ88_24380) | 20578..21282 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24455 (HUZ88_24385) | 21492..21704 | - | 213 | WP_000993245.1 | DUF3330 domain-containing protein | - |
| HUZ88_RS24460 (HUZ88_24390) | 21770..22006 | - | 237 | WP_022652270.1 | broad-spectrum mercury transporter MerE | - |
| HUZ88_RS24465 (HUZ88_24395) | 22003..22368 | - | 366 | WP_001277466.1 | mercury resistance co-regulator MerD | - |
| HUZ88_RS24470 (HUZ88_24400) | 22386..24071 | - | 1686 | WP_043907010.1 | mercury(II) reductase | - |
| HUZ88_RS24475 (HUZ88_24405) | 24110..24535 | - | 426 | WP_000522996.1 | organomercurial transporter MerC | - |
| HUZ88_RS24480 (HUZ88_24410) | 24563..24838 | - | 276 | WP_000732275.1 | mercury resistance system periplasmic binding protein MerP | - |
| HUZ88_RS24485 (HUZ88_24415) | 24854..25234 | - | 381 | WP_001294654.1 | mercuric ion transporter MerT | - |
| HUZ88_RS24490 (HUZ88_24420) | 25306..25761 | + | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| HUZ88_RS24495 (HUZ88_24425) | 25855..26838 | - | 984 | WP_022652268.1 | tyrosine-type recombinase/integrase | - |
| HUZ88_RS24500 | 27027..27854 | + | 828 | WP_047715664.1 | hypothetical protein | - |
| HUZ88_RS24505 | 28000..28407 | + | 408 | WP_224776060.1 | hypothetical protein | - |
| HUZ88_RS24510 (HUZ88_24435) | 28404..29513 | + | 1110 | WP_224776061.1 | hypothetical protein | - |
| HUZ88_RS24515 (HUZ88_24440) | 29535..30503 | + | 969 | WP_013087110.1 | IS5 family transposase IS903B | Transposase |
| HUZ88_RS24520 (HUZ88_24445) | 30529..30741 | - | 213 | WP_022652265.1 | hypothetical protein | - |
| HUZ88_RS24525 (HUZ88_24450) | 30890..31921 | - | 1032 | WP_001395480.1 | IS630 family transposase ISEc33 | Transposase |
| HUZ88_RS24530 (HUZ88_24455) | 32197..32727 | - | 531 | WP_008322250.1 | thermonuclease family protein | - |
| HUZ88_RS24535 (HUZ88_24460) | 32732..32929 | - | 198 | WP_008322246.1 | hypothetical protein | - |
| HUZ88_RS24540 (HUZ88_24465) | 33435..34466 | + | 1032 | WP_008322245.1 | LacI family DNA-binding transcriptional regulator | - |
| HUZ88_RS24545 (HUZ88_24470) | 34753..35706 | + | 954 | WP_008322243.1 | ABC transporter substrate-binding protein | - |
| HUZ88_RS24550 (HUZ88_24475) | 35771..37303 | + | 1533 | WP_008322240.1 | Ribose import ATP-binding protein RbsA | VF |
| HUZ88_RS24555 (HUZ88_24480) | 37290..38309 | + | 1020 | WP_004113181.1 | ribose ABC transporter permease | - |
| HUZ88_RS24560 (HUZ88_24485) | 38387..39757 | + | 1371 | WP_008322237.1 | hypothetical protein | - |
| HUZ88_RS24565 (HUZ88_24490) | 39754..40674 | + | 921 | WP_008322235.1 | carbohydrate kinase | - |
| HUZ88_RS24570 (HUZ88_24500) | 41220..41636 | - | 417 | WP_008322233.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HUZ88_RS24575 (HUZ88_24505) | 41633..41863 | - | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HUZ88_RS24580 (HUZ88_24510) | 42116..43138 | - | 1023 | WP_008322227.1 | helicase UvrD | - |
| HUZ88_RS24585 (HUZ88_24515) | 43224..43928 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24590 (HUZ88_24520) | 44331..44687 | + | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| HUZ88_RS24595 (HUZ88_24525) | 44976..47519 | - | 2544 | Protein_50 | Tn3 family transposase ISEc63 | Transposase |
| HUZ88_RS24600 (HUZ88_24530) | 47584..48288 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24605 (HUZ88_24535) | 48340..48594 | + | 255 | Protein_52 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24610 (HUZ88_24540) | 48784..49599 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HUZ88_RS24615 (HUZ88_24545) | 49750..50454 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24620 (HUZ88_24550) | 50576..51481 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| HUZ88_RS24625 (HUZ88_24555) | 51478..52716 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| HUZ88_RS24630 (HUZ88_24560) | 52716..53300 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| HUZ88_RS24635 (HUZ88_24565) | 53793..54557 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| HUZ88_RS24640 (HUZ88_24570) | 54675..54740 | - | 66 | Protein_59 | EAL domain-containing protein | - |
| HUZ88_RS24645 (HUZ88_24575) | 54784..55089 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| HUZ88_RS24650 (HUZ88_24580) | 55100..56305 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| HUZ88_RS24655 (HUZ88_24585) | 56533..57537 | + | 1005 | WP_022542389.1 | IS110 family transposase IS4321 | Transposase |
| HUZ88_RS24660 (HUZ88_24590) | 57719..57991 | - | 273 | WP_004883563.1 | hypothetical protein | - |
| HUZ88_RS24665 (HUZ88_24595) | 58119..58958 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| HUZ88_RS24670 (HUZ88_24600) | 58952..59299 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| HUZ88_RS24675 (HUZ88_24605) | 59416..60254 | - | 839 | Protein_66 | Streptomycin 3''-adenylyltransferase | ARG |
| HUZ88_RS24680 (HUZ88_24610) | 60260..60550 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| HUZ88_RS24685 (HUZ88_24615) | 60662..61159 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| HUZ88_RS24690 (HUZ88_24620) | 61304..62317 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| HUZ88_RS24695 (HUZ88_24625) | 62463..63167 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24700 (HUZ88_24630) | 63292..63792 | - | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| HUZ88_RS24705 (HUZ88_24635) | 64119..64823 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24710 (HUZ88_24640) | 64874..65428 | + | 555 | WP_071067567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HUZ88_RS24715 (HUZ88_24645) | 65431..68397 | + | 2967 | WP_001138070.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| HUZ88_RS24720 (HUZ88_24650) | 68476..69480 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| HUZ88_RS24725 | 69752..69838 | - | 87 | Protein_76 | Arm DNA-binding domain-containing protein | - |
| HUZ88_RS24730 (HUZ88_24660) | 70168..70983 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HUZ88_RS24735 (HUZ88_24665) | 71070..71312 | + | 243 | Protein_78 | phosphoglucosamine mutase | - |
| HUZ88_RS24740 (HUZ88_24675) | 71548..73041 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| HUZ88_RS24745 (HUZ88_24680) | 73252..73476 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| HUZ88_RS24750 (HUZ88_24685) | 73473..74210 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HUZ88_RS24755 (HUZ88_24690) | 74696..74836 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| HUZ88_RS24760 (HUZ88_24695) | 74842..75546 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24765 (HUZ88_24700) | 75626..76126 | + | 501 | WP_001239317.1 | hypothetical protein | - |
| HUZ88_RS24770 (HUZ88_24705) | 76276..76917 | + | 642 | WP_001011939.1 | Chloramphenicol acetyltransferase 2 | ARG |
| HUZ88_RS24775 (HUZ88_24710) | 77061..77765 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS24780 (HUZ88_24715) | 77943..78593 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUZ88_RS24785 (HUZ88_24720) | 78699..79898 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HUZ88_RS24790 (HUZ88_24725) | 79930..80814 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| HUZ88_RS24795 (HUZ88_24730) | 80952..81344 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HUZ88_RS24800 (HUZ88_24735) | 81348..83099 | + | 1752 | Protein_91 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HUZ88_RS24805 | 83132..83233 | + | 102 | Protein_92 | hypothetical protein | - |
| HUZ88_RS24810 (HUZ88_24740) | 83303..84139 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HUZ88_RS24815 (HUZ88_24745) | 84139..84942 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HUZ88_RS24825 (HUZ88_24755) | 86243..86857 | - | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HUZ88_RS24830 (HUZ88_24760) | 86983..89868 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| HUZ88_RS24835 | 89902..89973 | + | 72 | Protein_98 | hypothetical protein | - |
| HUZ88_RS24840 (HUZ88_24765) | 90031..90114 | - | 84 | Protein_99 | SOS response-associated peptidase | - |
| HUZ88_RS24845 (HUZ88_24770) | 90344..91204 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HUZ88_RS24850 (HUZ88_24775) | 91387..91944 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HUZ88_RS24855 (HUZ88_24780) | 92108..95116 | + | 3009 | WP_012817690.1 | Tn3 family transposase ISEc63 | Transposase |
| HUZ88_RS24860 (HUZ88_24785) | 95141..95617 | - | 477 | WP_047715668.1 | plasmid replication initiator RepA | - |
| HUZ88_RS24870 (HUZ88_24795) | 95920..96162 | - | 243 | WP_000078032.1 | replication regulatory protein RepA | - |
| HUZ88_RS24875 (HUZ88_24800) | 96294..96857 | - | 564 | WP_047715669.1 | Phospholipase D | VF |
| HUZ88_RS24880 (HUZ88_24805) | 97006..97359 | - | 354 | WP_047715670.1 | hypothetical protein | - |
| HUZ88_RS24885 (HUZ88_24810) | 97401..98093 | - | 693 | WP_239606577.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HUZ88_RS24890 (HUZ88_24815) | 98090..98497 | - | 408 | WP_239606578.1 | conjugal transfer protein TraI | - |
| HUZ88_RS24895 (HUZ88_24820) | 98613..99647 | - | 1035 | WP_239606573.1 | Multifunctional conjugation protein TraI | Relaxase |
| HUZ88_RS24900 (HUZ88_24825) | 99647..100201 | - | 555 | WP_239606574.1 | hypothetical protein | - |
| HUZ88_RS24905 (HUZ88_24830) | 100185..101015 | - | 831 | Protein_111 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HUZ88_RS24910 (HUZ88_24835) | 100940..101395 | - | 456 | WP_239606579.1 | conjugal transfer protein TraF | - |
| HUZ88_RS24915 (HUZ88_24840) | 101425..102600 | - | 1176 | WP_239606575.1 | conjugal transfer protein TraN | - |
| HUZ88_RS24920 (HUZ88_24845) | 102989..103660 | + | 672 | WP_022652243.1 | SOS response-associated peptidase family protein | - |
| HUZ88_RS24925 (HUZ88_24850) | 103840..104262 | + | 423 | WP_022652242.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HUZ88_RS24930 (HUZ88_24855) | 104262..104489 | + | 228 | Protein_116 | DNA polymerase V subunit UmuC | - |
| HUZ88_RS24935 (HUZ88_24860) | 104563..105567 | + | 1005 | Protein_117 | tyrosine-type recombinase/integrase | - |
| HUZ88_RS24940 (HUZ88_24865) | 105551..107677 | + | 2127 | WP_022652239.1 | tyrosine-type recombinase/integrase | - |
| HUZ88_RS24945 (HUZ88_24870) | 107826..109040 | + | 1215 | WP_022652238.1 | type II site-specific deoxyribonuclease | - |
| HUZ88_RS24950 (HUZ88_24875) | 109074..110507 | - | 1434 | WP_022652237.1 | DNA cytosine methyltransferase | - |
| HUZ88_RS24955 (HUZ88_24880) | 110811..112949 | - | 2139 | WP_022652236.1 | hypothetical protein | - |
| HUZ88_RS24960 (HUZ88_24885) | 113203..114245 | + | 1043 | Protein_122 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HUZ88_RS24965 (HUZ88_24890) | 114978..115943 | - | 966 | WP_022652318.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HUZ88_RS24970 (HUZ88_24895) | 115943..117109 | - | 1167 | WP_022652317.1 | plasmid-partitioning protein SopA | - |
| HUZ88_RS24975 (HUZ88_24900) | 117480..117722 | + | 243 | Protein_125 | IS3 family transposase ISEhe3 | Transposase |
| HUZ88_RS24980 (HUZ88_24905) | 117953..119293 | + | 1341 | WP_008786676.1 | IS110 family transposase ISWpi13 | Transposase |
| HUZ88_RS24985 (HUZ88_24910) | 119350..120885 | - | 1536 | WP_032430836.1 | IS66 family transposase ISSgsp1 | Transposase |
| HUZ88_RS24990 (HUZ88_24915) | 120935..121282 | - | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| HUZ88_RS24995 (HUZ88_24925) | 121771..122922 | - | 1152 | WP_239606576.1 | IS30 family transposase IS30D | Transposase |
| HUZ88_RS25000 (HUZ88_24930) | 122990..123883 | + | 894 | Protein_130 | IS3 family transposase ISEhe3 | Transposase |
| HUZ88_RS25005 (HUZ88_24935) | 124024..124881 | - | 858 | WP_043002029.1 | IS5 family transposase IS5D | Transposase |
| HUZ88_RS25010 (HUZ88_24940) | 125049..125579 | - | 531 | WP_022652313.1 | GNAT family N-acetyltransferase | - |
| HUZ88_RS25015 (HUZ88_24945) | 125583..125852 | - | 270 | WP_022652312.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|