MGE detailed information
MGE type: Prophage MGE length: 74681 bp
Accession: NZ_CP055041 Location: 3581204..3655884 Organism: Shigella flexneri strain SWHEFF_59 Replicon: chromosome
Accession: NZ_CP055041 Location: 3581204..3655884 Organism: Shigella flexneri strain SWHEFF_59 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ71_RS17440 (3576471) | 3576471..3576986 | + | 516 | WP_000523728.1 | PTS glucose transporter subunit IIA | - |
| HUZ71_RS17445 (3576992) | 3576992..3577195 | + | 204 | WP_001313182.1 | DUF2913 family protein | - |
| HUZ71_RS17450 (3577257) | 3577257..3577568 | + | 312 | WP_001313183.1 | DUF2913 family protein | - |
| HUZ71_RS17455 (3577598) | 3577598..3578524 | + | 927 | WP_000108760.1 | aminoimidazole riboside kinase | - |
| HUZ71_RS17460 (3578624) | 3578624..3580120 | + | 1497 | WP_000716410.1 | carbohydrate porin | - |
| HUZ71_RS17465 (3580357) | 3580357..3581148 | - | 792 | Protein_3414 | IS256-like element IS1414 family transposase | - |
| HUZ71_RS17470 (3581204) | 3581204..3581943 | + | 740 | Protein_3415 | IS3 family transposase IS629 | Transposase |
| HUZ71_RS17475 (3582616) | 3582616..3584124 | + | 1509 | WP_063084450.1 | group II intron reverse transcriptase/maturase | - |
| HUZ71_RS17480 (3584205) | 3584205..3584657 | + | 453 | Protein_3417 | IS3 family transposase ISEc14 | Transposase |
| HUZ71_RS17485 (3584884) | 3584884..3590619 | - | 5736 | WP_064986942.1 | DUF4011 domain-containing protein | - |
| HUZ71_RS17490 (3590806) | 3590806..3592848 | - | 2043 | WP_000995974.1 | DUF262 domain-containing protein | - |
| HUZ71_RS17495 (3592841) | 3592841..3594292 | - | 1452 | WP_077249079.1 | DUF262 domain-containing protein | - |
| HUZ71_RS17500 (3594317) | 3594317..3594739 | - | 423 | Protein_3421 | IS3 family transposase ISLad1 | Transposase |
| HUZ71_RS17505 (3594988) | 3594988..3595770 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| HUZ71_RS17510 (3595767) | 3595767..3596789 | - | 1023 | WP_072716700.1 | IS21 family transposase IS100kyp | Transposase |
| HUZ71_RS17515 (3596976) | 3596976..3597828 | - | 853 | Protein_3424 | N-6 DNA methylase | - |
| HUZ71_RS17520 (3597829) | 3597829..3598035 | + | 207 | Protein_3425 | transposase | - |
| HUZ71_RS17525 (3598083) | 3598083..3598313 | + | 231 | Protein_3426 | IS3 family transposase IS2 | Transposase |
| HUZ71_RS17530 (3598306) | 3598306..3599034 | + | 729 | Protein_3427 | IS91-like element ISVsa3 family transposase | - |
| HUZ71_RS17535 (3599210) | 3599210..3599512 | - | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| HUZ71_RS17540 (3599599) | 3599599..3600414 | - | 816 | WP_001043260.1 | hypothetical protein | ARG |
| HUZ71_RS17545 (3600504) | 3600504..3601594 | + | 1091 | WP_085940648.1 | IS4 family transposase ISAba1 | Transposase |
| HUZ71_RS17550 (3601791) | 3601791..3602276 | - | 486 | WP_006581703.1 | hypothetical protein | - |
| HUZ71_RS17555 (3602502) | 3602502..3604025 | - | 1524 | Protein_3432 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| HUZ71_RS17560 (3604087) | 3604087..3604839 | + | 753 | WP_000602738.1 | IS6 family transposase ISRle7 | Transposase |
| HUZ71_RS17565 (3605261) | 3605261..3606286 | - | 1026 | WP_000742814.1 | hypothetical protein | ARG |
| HUZ71_RS17570 (3606515) | 3606515..3607291 | - | 777 | WP_001199192.1 | hypothetical protein | ARG |
| HUZ71_RS17575 (3607405) | 3607405..3608109 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ71_RS17580 (3608204) | 3608204..3608425 | + | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| HUZ71_RS17585 (3608504) | 3608504..3608878 | + | 375 | WP_072648994.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ71_RS17590 (3608924) | 3608924..3609301 | + | 378 | WP_072644276.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUZ71_RS17595 (3609298) | 3609298..3609465 | + | 168 | Protein_3440 | DUF5983 family protein | - |
| HUZ71_RS17600 (3609523) | 3609523..3609720 | + | 198 | WP_094770706.1 | DUF957 domain-containing protein | - |
| HUZ71_RS17605 (3609817) | 3609817..3610662 | + | 846 | WP_001280435.1 | DUF4942 domain-containing protein | - |
| HUZ71_RS17615 (3611396) | 3611396..3613648 | + | 2253 | Protein_3443 | alpha-amylase family glycosyl hydrolase | - |
| HUZ71_RS17620 (3613984) | 3613984..3614961 | + | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| HUZ71_RS17625 (3614981) | 3614981..3616249 | + | 1269 | WP_000271951.1 | L-2-hydroxyglutarate oxidase | - |
| HUZ71_RS17630 (3616272) | 3616272..3617720 | + | 1449 | WP_239638014.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| HUZ71_RS17635 (3617734) | 3617734..3619014 | + | 1281 | WP_001087611.1 | hypothetical protein | VF |
| HUZ71_RS17640 (3619252) | 3619252..3620652 | + | 1401 | WP_001295173.1 | GABA permease | - |
| HUZ71_RS17645 (3620673) | 3620673..3621335 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| HUZ71_RS17650 (3621336) | 3621336..3621785 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| HUZ71_RS17655 (3621869) | 3621869..3622027 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| HUZ71_RS17660 (3622210) | 3622210..3622509 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HUZ71_RS17665 (3622519) | 3622519..3623043 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| HUZ71_RS17670 (3623090) | 3623090..3623494 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| HUZ71_RS17675 (3624163) | 3624163..3624612 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| HUZ71_RS17680 (3624649) | 3624649..3624993 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| HUZ71_RS17685 (3625145) | 3625145..3625474 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| HUZ71_RS17690 (3625722) | 3625722..3625967 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| HUZ71_RS17695 (3625964) | 3625964..3626374 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| HUZ71_RS17700 (3626347) | 3626347..3628491 | + | 2145 | WP_072666574.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| HUZ71_RS17705 (3628501) | 3628501..3629460 | + | 960 | WP_001469146.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| HUZ71_RS17710 (3629814) | 3629814..3631016 | + | 1203 | WP_000985494.1 | hypothetical protein | VF |
| HUZ71_RS17715 (3631009) | 3631009..3632073 | + | 1065 | WP_000774988.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| HUZ71_RS17720 (3632131) | 3632131..3633123 | + | 993 | WP_001216521.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| HUZ71_RS17725 (3633415) | 3633415..3634599 | + | 1185 | WP_001469149.1 | MFS transporter | - |
| HUZ71_RS17730 (3634723) | 3634723..3635460 | + | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| HUZ71_RS17735 (3635450) | 3635450..3635785 | + | 336 | WP_000119766.1 | L-valine transporter subunit YgaH | - |
| HUZ71_RS17740 (3635876) | 3635876..3636406 | + | 531 | WP_000378442.1 | hypothetical protein | VF |
| HUZ71_RS17745 (3636533) | 3636533..3637705 | + | 1173 | WP_001295175.1 | hypothetical protein | VF |
| HUZ71_RS17750 (3637722) | 3637722..3639260 | + | 1539 | WP_001295176.1 | hypothetical protein | VF |
| HUZ71_RS17755 (3639324) | 3639324..3639839 | - | 516 | WP_001130211.1 | hypothetical protein | VF |
| HUZ71_RS17760 (3639989) | 3639989..3641545 | - | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| HUZ71_RS17765 (3641618) | 3641618..3642046 | - | 429 | WP_001287454.1 | YqaA family protein | - |
| HUZ71_RS17770 (3642043) | 3642043..3642609 | - | 567 | WP_000273289.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| HUZ71_RS17800 (3644067) | 3644067..3644252 | - | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| HUZ71_RS17805 (3644487) | 3644487..3647117 | - | 2631 | WP_001638267.1 | alanine--tRNA ligase | - |
| HUZ71_RS17810 (3647245) | 3647245..3647745 | - | 501 | WP_001469156.1 | recombination regulator RecX | - |
| HUZ71_RS17815 (3647814) | 3647814..3648875 | - | 1062 | WP_000963143.1 | recombinase RecA | - |
| HUZ71_RS17820 (3648955) | 3648955..3649452 | - | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| HUZ71_RS17825 (3649597) | 3649597..3650682 | - | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| HUZ71_RS17830 (3650938) | 3650938..3651501 | + | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| HUZ71_RS17835 (3651498) | 3651498..3652457 | + | 960 | WP_000148878.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| HUZ71_RS17840 (3652468) | 3652468..3652839 | + | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| HUZ71_RS17845 (3652843) | 3652843..3653622 | + | 780 | WP_001548855.1 | sorbitol-6-phosphate dehydrogenase | - |
| HUZ71_RS17850 (3653727) | 3653727..3654086 | + | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| HUZ71_RS17855 (3654153) | 3654153..3654926 | + | 774 | WP_072644273.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| HUZ71_RS17860 (3654919) | 3654919..3655884 | + | 966 | WP_001287420.1 | hypothetical protein | VF |
| HUZ71_RS17865 (3655881) | 3655881..3657395 | - | 1515 | WP_072644272.1 | nitric oxide reductase transcriptional regulator NorR | - |
| HUZ71_RS17870 (3657582) | 3657582..3659021 | + | 1440 | WP_000029611.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| HUZ71_RS17875 (3659018) | 3659018..3660151 | + | 1134 | WP_000064739.1 | NADH:flavorubredoxin reductase NorW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|