MGE detailed information
MGE type: Genomic_island MGE length: 30755 bp
Accession: NZ_CP054940 Location: 4541614..4572368 Organism: Escherichia coli strain MS6192 Replicon: chromosome
Accession: NZ_CP054940 Location: 4541614..4572368 Organism: Escherichia coli strain MS6192 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MS6192_RS21870 () | 4538021..4538740 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| MS6192_RS21875 () | 4538737..4540368 | - | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| MS6192_RS21880 () | 4540549..4540779 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| MS6192_RS21885 () | 4540791..4541063 | + | 273 | WP_000405649.1 | N-acetyltransferase | - |
| MS6192_RS21890 () | 4541290..4541586 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| MS6192_RS21895 () | 4541614..4541787 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| MS6192_RS21900 () | 4541906..4543423 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| MS6192_RS21905 () | 4543660..4545117 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| MS6192_RS21910 () | 4545176..4547323 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| MS6192_RS21915 () | 4547403..4548737 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| MS6192_RS21920 () | 4549103..4550641 | - | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| MS6192_RS21925 () | 4551390..4552232 | - | 843 | WP_001280499.1 | DUF4942 domain-containing protein | - |
| MS6192_RS21930 () | 4552317..4552514 | - | 198 | WP_000838536.1 | DUF957 domain-containing protein | - |
| MS6192_RS21935 () | 4552526..4553014 | - | 489 | WP_000761717.1 | hypothetical protein | - |
| MS6192_RS21940 () | 4553011..4553388 | - | 378 | WP_001094445.1 | TA system toxin CbtA family protein | Toxin Detail |
| MS6192_RS21945 () | 4553478..4553846 | - | 369 | WP_024174331.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| MS6192_RS21950 () | 4553920..4554141 | - | 222 | WP_000692346.1 | DUF987 domain-containing protein | - |
| MS6192_RS21955 () | 4554210..4554686 | - | 477 | WP_001186725.1 | RadC family protein | - |
| MS6192_RS21960 () | 4554702..4555187 | - | 486 | WP_000214415.1 | antirestriction protein | - |
| MS6192_RS21965 () | 4555279..4555611 | - | 333 | Protein_4276 | DUF932 domain-containing protein | - |
| MS6192_RS21970 () | 4555614..4556394 | - | 781 | Protein_4277 | IS3 family transposase | - |
| MS6192_RS21975 () | 4556644..4562154 | - | 5511 | WP_021548590.1 | DEAD/DEAH box helicase | - |
| MS6192_RS21980 () | 4562151..4563194 | - | 1044 | WP_000455181.1 | hypothetical protein | - |
| MS6192_RS21985 () | 4563206..4565088 | - | 1883 | Protein_4280 | hypothetical protein | - |
| MS6192_RS21990 () | 4565100..4566746 | - | 1647 | WP_021548591.1 | hypothetical protein | - |
| MS6192_RS21995 () | 4566768..4567982 | - | 1215 | WP_000548583.1 | DUF4338 domain-containing protein | - |
| MS6192_RS22000 () | 4568359..4569330 | + | 972 | WP_001347735.1 | IS481 family transposase ISEc18 | Transposase |
| MS6192_RS22005 () | 4569570..4570841 | + | 1272 | Protein_4284 | phosphoethanolamine transferase | - |
| MS6192_RS22010 () | 4571106..4572368 | - | 1263 | WP_001218797.1 | Prophage integrase IntA ; Integrase | Integrase |
| MS6192_RS22020 () | 4572748..4573323 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| MS6192_RS22025 () | 4573360..4575057 | - | 1698 | WP_000068973.1 | protein-disulfide reductase DsbD | - |
| MS6192_RS22030 () | 4575033..4575371 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| MS6192_RS22035 () | 4575487..4576788 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|