MGE detailed information
MGE type: Genomic_island MGE length: 67482 bp
Accession: NZ_CP054191 Location: 762087..829568 Organism: Escherichia coli strain TH9F11 Replicon: chromosome
Accession: NZ_CP054191 Location: 762087..829568 Organism: Escherichia coli strain TH9F11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRL54_RS03670 (760361) | 760361..761623 | - | 1263 | WP_001218875.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HRL54_RS03675 (762087) | 762087..762413 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HRL54_RS03680 (762410) | 762410..762673 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HRL54_RS03685 (762745) | 762745..763611 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| HRL54_RS03690 (763696) | 763696..763893 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| HRL54_RS03695 (763905) | 763905..764396 | - | 492 | WP_023155722.1 | DUF5983 family protein | - |
| HRL54_RS03700 (764393) | 764393..764770 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| HRL54_RS03705 (764817) | 764817..765191 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| HRL54_RS03710 (765271) | 765271..765492 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HRL54_RS03715 (765561) | 765561..766037 | - | 477 | WP_001186715.1 | RadC family protein | - |
| HRL54_RS03720 (766053) | 766053..766538 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| HRL54_RS03725 (766630) | 766630..767448 | - | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| HRL54_RS03730 (767539) | 767539..767748 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| HRL54_RS03735 (767778) | 767778..768455 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| HRL54_RS03740 (768574) | 768574..769458 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| HRL54_RS03745 (769565) | 769565..770497 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| HRL54_RS03750 (770494) | 770494..771303 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| HRL54_RS03755 (773054) | 773054..773785 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| HRL54_RS03760 (773879) | 773879..774034 | - | 156 | WP_020923993.1 | hypothetical protein | - |
| HRL54_RS03765 (774058) | 774058..774318 | + | 261 | WP_223362175.1 | hypothetical protein | - |
| HRL54_RS03770 (774330) | 774330..774536 | - | 207 | WP_025492114.1 | hypothetical protein | - |
| HRL54_RS03775 (774970) | 774970..776574 | + | 1605 | WP_001067608.1 | YfjI family protein | - |
| HRL54_RS03780 (778171) | 778171..778737 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| HRL54_RS03785 (778857) | 778857..779006 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| HRL54_RS03790 (779021) | 779021..779593 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| HRL54_RS03795 (779662) | 779662..779898 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| HRL54_RS03800 (780167) | 780167..780715 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| HRL54_RS03805 (780734) | 780734..780982 | - | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| HRL54_RS03810 (781051) | 781051..781242 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| HRL54_RS26330 (781645) | 781645..782336 | - | 692 | Protein_748 | IS1 family transposase | - |
| HRL54_RS03830 (782396) | 782396..782572 | + | 177 | Protein_749 | transketolase family protein | - |
| HRL54_RS03835 (782761) | 782761..782936 | + | 176 | Protein_750 | transposase | - |
| HRL54_RS03840 (783799) | 783799..784365 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| HRL54_RS03845 (784606) | 784606..785421 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HRL54_RS03850 (785482) | 785482..786285 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HRL54_RS03855 (786285) | 786285..787121 | + | 837 | WP_049195390.1 | hypothetical protein | ARG |
| HRL54_RS03860 (787427) | 787427..787669 | + | 243 | WP_000844627.1 | transposase | - |
| HRL54_RS03865 (787701) | 787701..788351 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HRL54_RS03870 (788457) | 788457..789656 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| HRL54_RS03875 (789623) | 789623..789811 | - | 189 | Protein_758 | IS91 family transposase | - |
| HRL54_RS03880 (789923) | 789923..790228 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HRL54_RS03885 (790256) | 790256..791470 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| HRL54_RS03890 (791687) | 791687..792571 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| HRL54_RS03895 (792602) | 792602..793258 | - | 657 | Protein_762 | IS91-like element ISVsa3 family transposase | - |
| HRL54_RS03900 (793192) | 793192..793470 | - | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| HRL54_RS03905 (793893) | 793893..794207 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HRL54_RS03910 (794414) | 794414..794677 | + | 264 | Protein_765 | Pap fimbrial major pilin protein | VF |
| HRL54_RS03915 (795128) | 795128..796360 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| HRL54_RS03920 (796511) | 796511..797672 | - | 1162 | Protein_767 | IS3 family transposase IS3 | Transposase |
| HRL54_RS03925 (797840) | 797840..798820 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| HRL54_RS03930 (798817) | 798817..799761 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| HRL54_RS03935 (799764) | 799764..800846 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| HRL54_RS03940 (801313) | 801313..801579 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| HRL54_RS03945 (801879) | 801879..802393 | - | 515 | Protein_772 | ISL3 family transposase ISEc38 | Transposase |
| HRL54_RS03950 (803001) | 803001..806414 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| HRL54_RS03955 (806478) | 806478..808112 | + | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| HRL54_RS03960 (808109) | 808109..809251 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| HRL54_RS03965 (809260) | 809260..810882 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| HRL54_RS03970 (810882) | 810882..811778 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| HRL54_RS03975 (812001) | 812001..812179 | - | 179 | Protein_778 | integrase | - |
| HRL54_RS03980 (812409) | 812409..813146 | + | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| HRL54_RS03985 (813566) | 813566..814462 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| HRL54_RS03990 (814511) | 814511..815590 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| HRL54_RS03995 (815637) | 815637..817208 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| HRL54_RS04000 (817205) | 817205..817471 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| HRL54_RS04005 (817611) | 817611..817808 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| HRL54_RS04010 (817861) | 817861..819534 | + | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| HRL54_RS04015 (819678) | 819678..820712 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| HRL54_RS04020 (820762) | 820762..821037 | + | 276 | WP_023181049.1 | IS1 family transposase IS1A | Transposase |
| HRL54_RS04025 (820956) | 820956..821399 | + | 444 | WP_021547728.1 | IS1 family transposase | - |
| HRL54_RS04030 (821977) | 821977..823371 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| HRL54_RS04035 (823566) | 823566..824999 | - | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| HRL54_RS04040 (824996) | 824996..826273 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| HRL54_RS04045 (826336) | 826336..828462 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| HRL54_RS04050 (828558) | 828558..829568 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| HRL54_RS04055 (829718) | 829718..830902 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| HRL54_RS04065 (831260) | 831260..831967 | - | 708 | WP_000234522.1 | DUF554 domain-containing protein | - |
| HRL54_RS04070 (832120) | 832120..832203 | + | 84 | WP_212591416.1 | hypothetical protein | - |
| HRL54_RS04075 (832365) | 832365..834500 | + | 2136 | WP_000839746.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|