NZ_CP0540702344486..2506080

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 161595 bp
Accession: NZ_CP054070        Location: 2344486..2506080         Organism: Bordetella pertussis strain NZ61       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HRK15_RS11315 (HRK15_11305) 2339683..2341584 + 1902 WP_010930517.1 TRAP transporter large permease subunit -
HRK15_RS11320 (HRK15_11310) 2341633..2342427 + 795 WP_010930516.1 enoyl-CoA hydratase/isomerase family protein -
HRK15_RS11325 (HRK15_11315) 2342440..2343441 - 1002 WP_010930515.1 LD-carboxypeptidase -
HRK15_RS11330 (HRK15_11320) 2343438..2343944 - 507 WP_004568494.1 tRNA adenosine(34) deaminase TadA -
HRK15_RS11335 (HRK15_11325) 2343937..2344785 - 849 WP_010930513.1 HAD family hydrolase -
HRK15_RS11340 (HRK15_11330) 2344883..2345425 - 543 WP_019247780.1 hypothetical protein -
HRK15_RS11345 (HRK15_11335) 2345469..2346419 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK15_RS11350 (HRK15_11340) 2346575..2346901 - 327 WP_010930511.1 monovalent cation/H(+) antiporter subunit G -
HRK15_RS11355 (HRK15_11345) 2346898..2347182 - 285 WP_003810975.1 K+/H+ antiporter subunit F -
HRK15_RS11360 (HRK15_11350) 2347179..2347658 - 480 WP_010930510.1 Na+/H+ antiporter subunit E -
HRK15_RS11365 (HRK15_11355) 2347655..2349283 - 1629 WP_004568496.1 monovalent cation/H+ antiporter subunit D -
HRK15_RS11370 (HRK15_11360) 2349280..2349624 - 345 WP_003810969.1 Na+/H+ antiporter subunit C -
HRK15_RS11375 (HRK15_11365) 2349624..2352557 - 2934 WP_010930509.1 monovalent cation/H+ antiporter subunit A -
HRK15_RS11380 (HRK15_11370) 2352979..2353716 + 738 Protein_2234 tripartite tricarboxylate transporter substrate-binding protein -
HRK15_RS11385 (HRK15_11375) 2353716..2354666 - 951 WP_010930208.1 IS481 family transposase IS481v2 Transposase
HRK15_RS11390 (HRK15_11380) 2354765..2355061 - 297 WP_003811452.1 hypothetical protein -
HRK15_RS11395 (HRK15_11385) 2355183..2356085 + 903 WP_023995058.1 HTH-type transcriptional regulator CynR VF
HRK15_RS11400 (HRK15_11390) 2356090..2356803 - 714 WP_010930507.1 Sulfoquinovose 1-dehydrogenase VF
HRK15_RS11405 (HRK15_11395) 2356817..2357788 - 972 WP_010930506.1 tripartite tricarboxylate transporter substrate binding protein -
HRK15_RS11410 (HRK15_11400) 2357913..2359241 - 1329 Protein_2240 amidohydrolase family protein -
HRK15_RS11415 (HRK15_11405) 2359508..2359888 + 381 WP_019249653.1 helix-turn-helix domain-containing protein -
HRK15_RS11420 (HRK15_11410) 2359892..2361079 + 1188 WP_010930504.1 MFS transporter -
HRK15_RS11425 (HRK15_11415) 2361103..2361525 + 423 Protein_2243 arsenate reductase (glutaredoxin) -
HRK15_RS11430 (HRK15_11420) 2361518..2362240 + 723 WP_010930503.1 arsenical resistance protein ArsH -
HRK15_RS11435 (HRK15_11425) 2362237..2362428 - 192 WP_023852764.1 hypothetical protein -
HRK15_RS11440 (HRK15_11430) 2362534..2363484 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK15_RS11445 (HRK15_11435) 2363481..2363909 - 429 WP_019249376.1 hypothetical protein -
HRK15_RS11450 (HRK15_11440) 2363906..2365296 - 1391 Protein_2248 Arylsulfatase VF
HRK15_RS11455 (HRK15_11445) 2365311..2366273 - 963 WP_003811538.1 tripartite tricarboxylate transporter substrate binding protein -
HRK15_RS11460 (HRK15_11450) 2366389..2367342 + 954 WP_010930502.1 LysR family transcriptional regulator -
HRK15_RS11465 (HRK15_11455) 2367352..2368344 - 993 WP_010930501.1 tripartite tricarboxylate transporter substrate binding protein -
HRK15_RS11470 (HRK15_11460) 2368396..2369151 - 756 WP_010930500.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
HRK15_RS11475 (HRK15_11465) 2369216..2369896 - 681 WP_019248752.1 SDR family oxidoreductase -
HRK15_RS11480 (HRK15_11470) 2369986..2371077 + 1092 WP_023997526.1 fumarylacetoacetate hydrolase family protein -
HRK15_RS11485 (HRK15_11475) 2371108..2372304 + 1197 WP_010930497.1 alpha-hydroxy acid oxidase -
HRK15_RS11490 (HRK15_11480) 2372301..2373074 + 774 WP_010930496.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
HRK15_RS11495 (HRK15_11485) 2373091..2374113 + 1023 WP_023852774.1 tripartite tricarboxylate transporter substrate binding protein -
HRK15_RS11500 (HRK15_11490) 2374199..2375143 + 945 WP_010930494.1 LysR family transcriptional regulator -
HRK15_RS11505 (HRK15_11495) 2375121..2375990 - 870 WP_010930493.1 TauD/TfdA family dioxygenase -
HRK15_RS11510 (HRK15_11500) 2376234..2376857 + 624 WP_010930492.1 glutathione S-transferase N-terminal domain-containing protein -
HRK15_RS11515 (HRK15_11505) 2376990..2377169 + 180 WP_225975616.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HRK15_RS11520 (HRK15_11510) 2377172..2377471 + 300 WP_019247905.1 NadS family protein Antitoxin Detail
HRK15_RS11525 (HRK15_11515) 2377485..2380559 - 3075 WP_023995112.1 autotransporter SphB2 -
HRK15_RS11530 (HRK15_11520) 2380689..2381363 + 675 WP_010930489.1 putative transcriptional regulatory protein NarL VF
HRK15_RS11535 (HRK15_11525) 2381356..2383170 + 1815 WP_019247865.1 7TM diverse intracellular signaling domain-containing protein -
HRK15_RS11540 (HRK15_11530) 2383224..2384171 - 948 WP_010930487.1 hypothetical protein -
HRK15_RS11545 (HRK15_11535) 2384276..2385226 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRK15_RS11550 (HRK15_11540) 2385242..2385700 - 459 Protein_2268 spermidine synthase -
HRK15_RS11555 (HRK15_11545) 2385779..2387404 - 1626 WP_023852967.1 Arylsulfatase VF
HRK15_RS11560 (HRK15_11550) 2387454..2388488 - 1035 WP_010930475.1 HAD family hydrolase -
HRK15_RS11565 (HRK15_11555) 2388491..2389837 - 1347 WP_010930476.1 BatD family protein -
HRK15_RS11570 (HRK15_11560) 2389834..2391348 - 1515 WP_010930477.1 VWA domain-containing protein -
HRK15_RS11575 (HRK15_11565) 2391339..2392349 - 1011 WP_010930478.1 VWA domain-containing protein -
HRK15_RS11580 (HRK15_11570) 2392336..2392826 - 491 Protein_2274 DUF4381 domain-containing protein -
HRK15_RS11585 (HRK15_11575) 2392823..2393764 - 942 WP_010930479.1 DUF58 domain-containing protein -
HRK15_RS11590 (HRK15_11580) 2393773..2394741 - 969 WP_010930480.1 AAA family ATPase -
HRK15_RS11595 (HRK15_11585) 2394797..2395937 - 1141 Protein_2277 formylglycine-generating enzyme family protein -
HRK15_RS11600 (HRK15_11590) 2396281..2397249 + 969 WP_010930481.1 transporter -
HRK15_RS11605 (HRK15_11595) 2397427..2398416 + 990 WP_010930482.1 tripartite tricarboxylate transporter substrate binding protein -
HRK15_RS11610 (HRK15_11600) 2398463..2399221 + 759 WP_010926609.1 Dihydroanticapsin 7-dehydrogenase VF
HRK15_RS11615 (HRK15_11605) 2399411..2400148 + 738 WP_010930483.1 TerC family protein -
HRK15_RS11620 (HRK15_11610) 2400247..2401197 + 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRK15_RS11625 (HRK15_11620) 2401382..2402164 + 783 WP_003816696.1 ABC transporter ATP-binding protein -
HRK15_RS11630 (HRK15_11625) 2402158..2402859 + 702 WP_003810743.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF VF
HRK15_RS11635 (HRK15_11630) 2403099..2403701 + 603 WP_003810741.1 TetR/AcrR family transcriptional regulator -
HRK15_RS11640 (HRK15_11635) 2403677..2404591 - 915 WP_010930484.1 FAD-dependent oxidoreductase -
HRK15_RS11645 (HRK15_11640) 2405028..2405978 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK15_RS11650 (HRK15_11645) 2405975..2407531 - 1557 WP_014486074.1 hypothetical protein VF
HRK15_RS11655 (HRK15_11650) 2407524..2408297 - 774 WP_010930486.1 putative oxidoreductase VF
HRK15_RS11660 (HRK15_11655) 2408356..2409306 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK15_RS11665 (HRK15_11660) 2409388..2410563 - 1176 WP_023852812.1 hypothetical protein VF
HRK15_RS11670 (HRK15_11665) 2410577..2412634 - 2058 WP_010930473.1 hypothetical protein VF
HRK15_RS11675 (HRK15_11670) 2412631..2413656 - 1026 WP_010930472.1 UDP-N-acetylglucosamine 4-epimerase VF
HRK15_RS11680 (HRK15_11675) 2413668..2414957 - 1290 WP_010930471.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
HRK15_RS11685 (HRK15_11680) 2414980..2416077 - 1098 WP_010930470.1 hypothetical protein VF
HRK15_RS11690 (HRK15_11685) 2416074..2416964 - 891 WP_003811224.1 capsular polysaccharide biosynthesis protein -
HRK15_RS11695 (HRK15_11690) 2416961..2419045 - 2085 WP_010930469.1 Putative glycosyltransferase EpsF VF
HRK15_RS11700 (HRK15_11695) 2419077..2420246 - 1170 WP_010930468.1 capsule polysaccharide transporter -
HRK15_RS11705 (HRK15_11700) 2420288..2421028 - 741 WP_014486073.1 Polysialic acid transport ATP-binding protein KpsT VF
HRK15_RS11710 (HRK15_11705) 2421028..2421798 - 771 WP_010930466.1 Polysialic acid transport protein KpsM VF
HRK15_RS11715 (HRK15_11710) 2422123..2422290 + 168 WP_019247171.1 hypothetical protein -
HRK15_RS11720 (HRK15_11715) 2422558..2423439 + 882 WP_023995078.1 Putative glycosyltransferase EpsH VF
HRK15_RS11725 (HRK15_11720) 2423466..2425550 + 2085 WP_010930464.1 hypothetical protein -
HRK15_RS11730 (HRK15_11725) 2425688..2427673 + 1986 WP_010930463.1 hypothetical protein VF
HRK15_RS11735 (HRK15_11730) 2427997..2428497 - 501 WP_003811209.1 DNA protection during starvation protein 2 VF
HRK15_RS11740 (HRK15_11735) 2428596..2430122 - 1527 WP_010930461.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase -
HRK15_RS11745 (HRK15_11740) 2430260..2431147 + 888 WP_010930460.1 HTH-type transcriptional regulator DmlR VF
HRK15_RS11750 (HRK15_11745) 2431162..2432115 - 954 WP_003811203.1 Hydrogen peroxide-inducible genes activator VF
HRK15_RS11755 (HRK15_11750) 2432167..2434257 - 2091 WP_033446218.1 ATP-dependent DNA helicase RecG -
HRK15_RS11760 (HRK15_11755) 2434273..2434659 - 387 WP_010930458.1 Rid family detoxifying hydrolase -
HRK15_RS11765 (HRK15_11760) 2434836..2437189 - 2354 Protein_2311 Pertactin autotransporter VF
HRK15_RS11770 (HRK15_11765) 2437353..2438156 - 804 WP_010930457.1 2,5-didehydrogluconate reductase DkgB -
HRK15_RS11775 (HRK15_11770) 2438228..2439348 - 1121 Protein_2313 MFS transporter -
HRK15_RS11780 (HRK15_11775) 2439450..2440352 + 903 WP_010930456.1 HTH-type transcriptional regulator DmlR VF
HRK15_RS11785 (HRK15_11780) 2440417..2441193 - 777 WP_003811187.1 ferredoxin--NADP reductase -
HRK15_RS11790 (HRK15_11785) 2441515..2442564 + 1050 WP_010930455.1 Fe(3+) ABC transporter substrate-binding protein -
HRK15_RS11795 (HRK15_11790) 2442688..2444358 + 1671 WP_010930454.1 iron ABC transporter permease -
HRK15_RS11800 (HRK15_11795) 2444363..2445157 + 795 WP_019248220.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
HRK15_RS11805 (HRK15_11800) 2445256..2446206 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRK15_RS11810 (HRK15_11805) 2446226..2447131 - 906 WP_010930453.1 pirin family protein -
HRK15_RS11815 (HRK15_11810) 2447209..2447907 - 699 WP_003811176.1 pirin family protein -
HRK15_RS11820 (HRK15_11815) 2448067..2449011 + 945 WP_010930452.1 HTH-type transcriptional regulator YhaJ VF
HRK15_RS11825 (HRK15_11820) 2449021..2450508 - 1488 WP_010930451.1 DNA-binding transcriptional regulator NtrC VF
HRK15_RS11830 (HRK15_11825) 2450508..2451575 - 1068 WP_003811167.1 nitrogen regulation protein NR(II) -
HRK15_RS11835 (HRK15_11830) 2451639..2453051 - 1413 WP_003811164.1 type I glutamate--ammonia ligase -
HRK15_RS11840 (HRK15_11835) 2453237..2454457 - 1221 WP_010930450.1 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR VF
HRK15_RS11845 (HRK15_11840) 2454479..2455429 - 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
HRK15_RS11850 (HRK15_11845) 2455528..2456169 - 642 WP_010930449.1 dITP/XTP pyrophosphatase VF
HRK15_RS11855 (HRK15_11850) 2456296..2458098 + 1803 WP_010930448.1 EAL domain-containing protein -
HRK15_RS11860 (HRK15_11855) 2458237..2459667 - 1431 Protein_2330 Methyl-accepting chemotaxis protein I VF
HRK15_RS11865 (HRK15_11860) 2459750..2460655 - 906 WP_003811152.1 LysR family transcriptional regulator -
HRK15_RS11870 (HRK15_11865) 2460837..2462213 + 1377 WP_010930446.1 MmgE/PrpD family protein -
HRK15_RS11875 (HRK15_11870) 2462380..2463120 - 741 WP_003811149.1 ribonuclease PH -
HRK15_RS11880 (HRK15_11875) 2463257..2464183 + 927 WP_003811148.1 YicC/YloC family endoribonuclease -
HRK15_RS11885 (HRK15_11880) 2464456..2464611 + 156 WP_010930445.1 hypothetical protein -
HRK15_RS19820 2464624..2464752 + 129 WP_010928840.1 hypothetical protein -
HRK15_RS11890 (HRK15_11885) 2464749..2465033 + 285 WP_010926696.1 helix-turn-helix domain-containing protein -
HRK15_RS11895 (HRK15_11890) 2465092..2466582 - 1491 WP_003811138.1 AMP nucleosidase -
HRK15_RS11900 (HRK15_11895) 2466827..2467426 + 600 WP_003811137.1 Murein DD-endopeptidase MepH VF
HRK15_RS11905 (HRK15_11900) 2467431..2468201 - 771 WP_003811135.1 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)) VF
HRK15_RS11910 (HRK15_11905) 2468439..2469152 + 714 WP_010930444.1 Cytochrome c4 VF
HRK15_RS11915 (HRK15_11910) 2469149..2470066 + 918 WP_010930443.1 c-type cytochrome -
HRK15_RS11920 (HRK15_11915) 2470202..2470834 + 633 WP_010930442.1 guanylate kinase -
HRK15_RS11925 (HRK15_11920) 2470876..2471079 + 204 WP_010930441.1 DNA-directed RNA polymerase subunit omega -
HRK15_RS11930 (HRK15_11925) 2471104..2473383 + 2280 WP_010930440.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT VF
HRK15_RS11935 (HRK15_11930) 2473396..2474124 - 729 WP_003811113.1 Glutamine transport ATP-binding protein GlnQ VF
HRK15_RS11940 (HRK15_11935) 2474121..2474780 - 660 WP_003811112.1 glutamine ABC transporter permease GlnP -
HRK15_RS11945 (HRK15_11940) 2474849..2475601 - 753 WP_010930439.1 glutamine ABC transporter substrate-binding protein GlnH -
HRK15_RS11950 (HRK15_11945) 2475783..2476733 - 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRK15_RS11955 (HRK15_11950) 2476892..2477540 + 649 Protein_2350 site-2 protease family protein -
HRK15_RS11960 (HRK15_11955) 2477626..2478531 + 906 WP_033446216.1 4-hydroxy-tetrahydrodipicolinate synthase -
HRK15_RS11965 (HRK15_11960) 2478543..2479670 + 1128 WP_010930437.1 outer membrane protein assembly factor BamC -
HRK15_RS11970 (HRK15_11965) 2479759..2480373 - 615 WP_010930436.1 Major fimbrial subunit SMF-1 VF
HRK15_RS11975 (HRK15_11970) 2481028..2482215 - 1188 WP_010930435.1 cupin domain-containing protein -
HRK15_RS11980 (HRK15_11975) 2482212..2484809 - 2598 WP_033446228.1 DNA mismatch repair protein MutS -
HRK15_RS11985 (HRK15_11980) 2485064..2485279 + 216 WP_010930433.1 dodecin family protein -
HRK15_RS11990 (HRK15_11985) 2485735..2486289 - 555 WP_010930432.1 NAD(P)H-dependent oxidoreductase -
HRK15_RS11995 (HRK15_11990) 2486557..2487117 + 561 WP_010930431.1 membrane protein -
HRK15_RS12000 (HRK15_11995) 2487229..2488533 + 1305 WP_023853587.1 imelysin family protein -
HRK15_RS12005 (HRK15_12000) 2488530..2490041 + 1512 WP_019247498.1 di-heme oxidoredictase family protein -
HRK15_RS12010 (HRK15_12005) 2490093..2491148 + 1056 WP_224019495.1 imelysin family protein -
HRK15_RS12015 (HRK15_12010) 2491138..2492250 + 1113 WP_019249265.1 DUF1513 domain-containing protein -
HRK15_RS12020 (HRK15_12015) 2492349..2493299 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
HRK15_RS12025 (HRK15_12020) 2493296..2493922 - 627 WP_010928449.1 L-threonylcarbamoyladenylate synthase -
HRK15_RS12030 (HRK15_12025) 2493982..2494833 + 852 WP_010930427.1 neutral zinc metallopeptidase -
HRK15_RS12035 (HRK15_12030) 2494937..2495536 + 600 WP_010930426.1 hypothetical protein -
HRK15_RS12040 (HRK15_12035) 2495533..2496297 + 765 WP_010930425.1 hypothetical protein -
HRK15_RS12045 (HRK15_12040) 2496367..2497317 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
HRK15_RS12050 (HRK15_12045) 2497416..2498024 - 609 WP_010930424.1 recombination mediator RecR -
HRK15_RS12055 (HRK15_12050) 2498075..2498401 - 327 WP_010930423.1 YbaB/EbfC family nucleoid-associated protein -
HRK15_RS12060 (HRK15_12055) 2498448..2500538 - 2091 WP_010930422.1 DNA polymerase III subunit gamma/tau -
HRK15_RS12070 (HRK15_12065) 2501334..2504738 - 3405 WP_010930421.1 UvrD-helicase domain-containing protein -
HRK15_RS12075 (HRK15_12070) 2504751..2507411 - 2661 WP_010930420.1 PD-(D/E)XK nuclease family protein -
HRK15_RS12080 (HRK15_12075) 2507433..2507579 - 147 WP_004568212.1 hypothetical protein -
HRK15_RS12085 (HRK15_12080) 2507615..2508817 - 1203 WP_010930419.1 MFS transporter -
HRK15_RS12095 (HRK15_12090) 2509504..2510616 + 1113 WP_023994932.1 D-alanyl-D-alanine endopeptidase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance