MGE detailed information
MGE type: Conjugative plasmid MGE length: 87125 bp
Accession: NZ_CP053737 Location: 1..87125 Organism: Escherichia coli strain CP8-3_Sichuan Replicon: plasmid pCP8-3-IncFII
Accession: NZ_CP053737 Location: 1..87125 Organism: Escherichia coli strain CP8-3_Sichuan Replicon: plasmid pCP8-3-IncFII
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP430_RS22800 () | 1561..1776 | + | 216 | WP_061583825.1 | hypothetical protein | - |
| HP430_RS22805 () | 1808..1936 | - | 129 | Protein_2 | IS1 family transposase | - |
| HP430_RS22810 () | 1989..2693 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HP430_RS22815 () | 2754..2900 | - | 147 | Protein_4 | phage integrase N-terminal SAM-like domain-containing protein | - |
| HP430_RS22820 () | 3049..3840 | + | 792 | WP_024198294.1 | Streptomycin 3''-adenylyltransferase | ARG |
| HP430_RS22825 () | 4007..4906 | + | 900 | WP_000131886.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| HP430_RS22830 () | 5113..5433 | + | 321 | WP_000535481.1 | co-chaperone GroES | - |
| HP430_RS22835 () | 5489..7126 | + | 1638 | WP_000719078.1 | 60 kDa chaperonin | VF |
| HP430_RS22840 () | 7315..8844 | + | 1530 | WP_001137772.1 | IS91 family transposase ISVsa3 | Transposase |
| HP430_RS22845 () | 9112..9720 | + | 609 | Protein_10 | IS256 family transposase ISEc58 | Transposase |
| HP430_RS22850 () | 9785..10489 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HP430_RS22855 () | 10763..11323 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HP430_RS22860 () | 11326..11484 | + | 159 | Protein_13 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HP430_RS22865 () | 11548..12252 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HP430_RS22870 () | 12306..12563 | + | 258 | Protein_15 | replication protein C | - |
| HP430_RS22875 () | 12612..13067 | + | 456 | Protein_16 | transposase | - |
| HP430_RS22880 () | 13098..13982 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| HP430_RS22885 () | 14199..15413 | + | 1215 | WP_094322497.1 | Bicyclomycin resistance protein | ARG |
| HP430_RS22890 () | 15557..15865 | - | 309 | Protein_19 | hypothetical protein | Relaxase |
| HP430_RS22895 () | 16508..17212 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HP430_RS22900 () | 17266..17733 | + | 468 | Protein_21 | conjugal transfer protein | - |
| HP430_RS22905 () | 17978..18094 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| HP430_RS22910 () | 18110..20029 | + | 1920 | WP_025989258.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| HP430_RS22915 () | 20088..20450 | + | 363 | Protein_24 | IS5 family transposase ISPrst3 | Transposase |
| HP430_RS22920 () | 20479..23292 | - | 2814 | Protein_25 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HP430_RS22925 () | 23347..24051 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HP430_RS22930 () | 24323..25894 | + | 1572 | WP_094307857.1 | putative ABC transporter ATP-binding protein YheS | VF |
| HP430_RS22935 () | 25981..26427 | + | 447 | Protein_28 | ISKra4 family transposase ISKpn19 | Transposase |
| HP430_RS22940 () | 26709..27365 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HP430_RS22945 () | 27684..28112 | - | 429 | Protein_30 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HP430_RS22950 () | 28145..29536 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| HP430_RS22955 () | 29573..30145 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| HP430_RS22960 () | 30282..30872 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| HP430_RS22965 () | 30947..31021 | + | 75 | Protein_34 | hypothetical protein | - |
| HP430_RS22970 () | 31255..31485 | + | 231 | WP_050585108.1 | hypothetical protein | - |
| HP430_RS22975 () | 31608..31958 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| HP430_RS22980 () | 31961..32923 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| HP430_RS22985 () | 33070..33363 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| HP430_RS22990 () | 33440..34123 | + | 684 | WP_000085883.1 | DNA methylase | - |
| HP430_RS22995 () | 34124..34345 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HP430_RS23000 () | 34359..34793 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| HP430_RS23005 () | 34844..35608 | + | 765 | Protein_42 | hypothetical protein | - |
| HP430_RS23010 () | 35493..36065 | + | 573 | WP_094307766.1 | YubH family protein | - |
| HP430_RS23015 () | 36161..36463 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HP430_RS23020 () | 36510..36932 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| HP430_RS23025 () | 36929..37120 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| HP430_RS23030 () | 38158..38388 | + | 231 | WP_000218647.1 | hypothetical protein | - |
| HP430_RS23035 () | 38440..39801 | + | 1362 | WP_000170713.1 | DUF3560 domain-containing protein | - |
| HP430_RS23040 () | 39848..40411 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| HP430_RS23045 () | 40563..40823 | + | 261 | WP_071600428.1 | hypothetical protein | - |
| HP430_RS23050 () | 40874..41065 | + | 192 | WP_032140903.1 | hypothetical protein | - |
| HP430_RS23055 () | 41293..41820 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| HP430_RS23060 () | 41876..42109 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| HP430_RS23065 () | 42168..44136 | + | 1969 | Protein_54 | ParB/RepB/Spo0J family partition protein | - |
| HP430_RS23070 () | 44205..44639 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HP430_RS23075 () | 44636..45355 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 45367..45591 | + | 225 | NuclAT_0 | - | - |
| - () | 45367..45591 | + | 225 | NuclAT_0 | - | - |
| - () | 45367..45591 | + | 225 | NuclAT_0 | - | - |
| - () | 45367..45591 | + | 225 | NuclAT_0 | - | - |
| - () | 45367..45591 | - | 225 | NuclAT_0 | - | - |
| HP430_RS23080 () | 45376..45555 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 45524..45589 | + | 66 | NuclAT_1 | - | Antitoxin Detail |
| HP430_RS23085 () | 45635..45793 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HP430_RS23090 () | 46289..46482 | + | 194 | Protein_59 | hypothetical protein | - |
| HP430_RS23095 () | 46708..47004 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| HP430_RS23100 () | 47115..47936 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| HP430_RS23105 () | 48233..48835 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| HP430_RS23110 () | 49158..49541 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| HP430_RS23115 () | 49735..50406 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| HP430_RS23120 () | 50543..50770 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| HP430_RS23125 () | 50803..51162 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| HP430_RS23130 () | 51177..51488 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| HP430_RS23135 () | 51510..52076 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| HP430_RS23140 () | 52063..52791 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| HP430_RS23145 () | 52791..54242 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| HP430_RS23150 () | 54211..54798 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| HP430_RS23155 () | 54737..55105 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| HP430_RS23160 () | 55102..55617 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HP430_RS23165 () | 55752..55973 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| HP430_RS23170 () | 55966..56379 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| HP430_RS23175 () | 56372..56845 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| HP430_RS23180 () | 56925..57143 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| HP430_RS23185 () | 57171..57518 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| HP430_RS23190 () | 57644..60274 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| HP430_RS23195 () | 60271..60657 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| HP430_RS23200 () | 60654..61286 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| HP430_RS23205 () | 61283..62275 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| HP430_RS23210 () | 62305..62610 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| HP430_RS23215 () | 62619..63257 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HP430_RS23220 () | 63254..65104 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HP430_RS23225 () | 65131..65388 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| HP430_RS23230 () | 65381..66124 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HP430_RS23235 () | 66138..66482 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| HP430_RS23240 () | 66601..66885 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HP430_RS23245 () | 66872..67417 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HP430_RS23250 () | 67347..67694 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| HP430_RS23255 () | 67642..68067 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| HP430_RS23260 () | 68054..69427 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| HP430_RS23265 () | 69424..72246 | + | 2823 | WP_094307824.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HP430_RS23270 () | 72262..72747 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| HP430_RS23275 () | 72796..73527 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| HP430_RS23280 () | 73730..74467 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| HP430_RS23285 () | 74518..76779 | + | 2262 | WP_046072940.1 | type IV conjugative transfer system coupling protein TraD | - |
| HP430_RS23290 () | 76779..82049 | + | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| HP430_RS23295 () | 82069..82815 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| HP430_RS23300 () | 82874..83734 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| HP430_RS23305 () | 83837..84397 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| HP430_RS23310 () | 84526..84738 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| HP430_RS23315 () | 84983..85444 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| HP430_RS23320 () | 85490..85699 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| HP430_RS23325 () | 85737..86327 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| HP430_RS23330 () | 86567..86821 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|