MGE detailed information
MGE type: Genomic_island MGE length: 68440 bp
Accession: NZ_CP053281 Location: 4429364..4497803 Organism: Escherichia coli strain SCU-308 Replicon: chromosome
Accession: NZ_CP053281 Location: 4429364..4497803 Organism: Escherichia coli strain SCU-308 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ45_RS21275 () | 4424801..4425139 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| HHJ45_RS21280 () | 4425115..4426812 | + | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| HHJ45_RS21285 () | 4426849..4427424 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| HHJ45_RS21295 () | 4427804..4429066 | + | 1263 | Protein_4166 | integrase arm-type DNA-binding domain-containing protein | - |
| HHJ45_RS21300 () | 4429364..4429876 | - | 513 | WP_061353203.1 | hypothetical protein | VF |
| HHJ45_RS21305 () | 4430411..4430830 | - | 420 | WP_000723766.1 | Protein AfaD | VF |
| HHJ45_RS21310 () | 4430846..4433434 | - | 2589 | WP_000554932.1 | F1 capsule-anchoring protein | VF |
| HHJ45_RS21315 () | 4433603..4434370 | - | 768 | WP_000702043.1 | Chaperone protein caf1M | VF |
| HHJ45_RS21320 () | 4434448..4434792 | - | 345 | WP_001323645.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HHJ45_RS21325 () | 4435334..4435522 | + | 189 | WP_000654305.1 | P fimbrial regulatory protein KS71A | VF |
| HHJ45_RS21330 () | 4435616..4436649 | - | 1034 | Protein_4173 | IS66 family transposase | - |
| HHJ45_RS21335 () | 4436843..4437802 | + | 960 | Protein_4174 | IS21 family transposase ISEc12 | Transposase |
| HHJ45_RS21340 () | 4438154..4438705 | - | 552 | WP_001445604.1 | Transcriptional repressor MprA | VF |
| HHJ45_RS21350 () | 4440301..4440552 | - | 252 | Protein_4177 | IS3 family transposase ISSfl10 | Transposase |
| HHJ45_RS21355 () | 4440671..4441750 | - | 1080 | WP_000468218.1 | hypothetical protein | - |
| HHJ45_RS21360 () | 4441826..4442326 | - | 501 | WP_000620428.1 | Minor fimbrial protein PrsF | VF |
| HHJ45_RS21365 () | 4442402..4442929 | - | 528 | WP_000720139.1 | Fimbrial protein PapE | VF |
| HHJ45_RS21370 () | 4442956..4443492 | - | 537 | WP_000597715.1 | Fimbrial adapter PapK | VF |
| HHJ45_RS21375 () | 4443502..4444083 | - | 582 | WP_000261302.1 | hypothetical protein | VF |
| HHJ45_RS21380 () | 4444120..4444854 | - | 735 | WP_000265730.1 | Chaperone protein PapD | VF |
| HHJ45_RS21385 () | 4444925..4447435 | - | 2511 | WP_171277416.1 | Outer membrane usher protein PapC | VF |
| HHJ45_RS21390 () | 4447494..4448081 | - | 588 | WP_001366863.1 | PAP fimbrial minor pilin protein | VF |
| HHJ45_RS21395 () | 4448144..4448695 | - | 552 | WP_001531940.1 | Pap fimbrial major pilin protein | VF |
| HHJ45_RS21400 () | 4448901..4449215 | - | 315 | WP_000930064.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HHJ45_RS21405 () | 4449636..4449857 | + | 222 | WP_001298052.1 | P fimbrial regulatory protein KS71A | VF |
| HHJ45_RS21410 () | 4450343..4450630 | - | 288 | Protein_4189 | DDE-type integrase/transposase/recombinase | - |
| HHJ45_RS21415 () | 4450647..4451723 | - | 1077 | WP_024177929.1 | IS110 family transposase ISEc21 | Transposase |
| HHJ45_RS21420 () | 4452005..4452184 | - | 180 | Protein_4191 | IS3 family transposase | - |
| HHJ45_RS21425 () | 4452265..4453773 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| HHJ45_RS21430 () | 4454446..4454871 | - | 426 | Protein_4193 | IS3 family transposase | - |
| HHJ45_RS21435 () | 4454880..4455821 | + | 942 | Protein_4194 | IS3 family transposase ISSd1 | Transposase |
| HHJ45_RS21440 () | 4455937..4456281 | + | 345 | WP_000166950.1 | ProQ/FinO family protein | - |
| HHJ45_RS21445 () | 4456300..4456848 | - | 549 | WP_001167424.1 | hypothetical protein | - |
| HHJ45_RS21450 () | 4457583..4457770 | + | 188 | Protein_4197 | hypothetical protein | - |
| HHJ45_RS21455 () | 4457904..4458560 | + | 657 | Protein_4198 | CPBP family intramembrane metalloprotease | - |
| HHJ45_RS21460 () | 4458737..4459014 | - | 278 | Protein_4199 | microcin McmA | - |
| HHJ45_RS21465 () | 4459268..4459533 | - | 266 | Protein_4200 | ATP-binding cassette domain-containing protein | - |
| HHJ45_RS21470 () | 4459847..4460080 | - | 234 | WP_000958500.1 | AlpA family transcriptional regulator | - |
| HHJ45_RS21475 () | 4460149..4460721 | - | 573 | WP_000991592.1 | hypothetical protein | - |
| HHJ45_RS21480 () | 4460968..4461534 | - | 567 | WP_001126816.1 | inovirus-type Gp2 protein | - |
| HHJ45_RS21485 () | 4462885..4463709 | - | 825 | WP_001082114.1 | hypothetical protein | - |
| HHJ45_RS21490 () | 4464176..4464717 | + | 542 | Protein_4205 | hypothetical protein | - |
| HHJ45_RS21495 () | 4465261..4465479 | + | 219 | WP_000382622.1 | hypothetical protein | - |
| HHJ45_RS21500 () | 4465878..4466900 | + | 1023 | WP_001367704.1 | IS21 family transposase IS100kyp | Transposase |
| HHJ45_RS21505 () | 4466900..4467679 | + | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| HHJ45_RS21510 () | 4467971..4468762 | + | 792 | WP_127781554.1 | hypothetical protein | - |
| HHJ45_RS21515 () | 4468885..4469610 | + | 726 | Protein_4210 | hypothetical protein | VF |
| HHJ45_RS21520 () | 4469695..4470120 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| HHJ45_RS21525 () | 4470117..4470467 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| HHJ45_RS21530 () | 4470498..4472111 | + | 1614 | WP_001366169.1 | IS66 family transposase ISEc23 | Transposase |
| HHJ45_RS21535 () | 4472875..4473606 | - | 732 | WP_171277417.1 | inovirus Gp2 family protein | - |
| HHJ45_RS21540 () | 4473736..4473879 | + | 144 | WP_001324366.1 | hypothetical protein | - |
| HHJ45_RS21545 () | 4474382..4474732 | + | 351 | WP_001324367.1 | variant SH3 domain protein | - |
| HHJ45_RS21550 () | 4474754..4475581 | + | 828 | Protein_4217 | transposase | - |
| HHJ45_RS21555 () | 4476700..4477431 | + | 732 | WP_001324372.1 | hypothetical protein | - |
| HHJ45_RS21560 () | 4477428..4478387 | - | 960 | WP_000126801.1 | hypothetical protein | - |
| HHJ45_RS21565 () | 4478493..4479377 | + | 885 | WP_000010397.1 | 50S ribosome-binding GTPase | - |
| HHJ45_RS21570 () | 4479580..4480260 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| HHJ45_RS21575 () | 4480408..4481085 | + | 678 | WP_001097298.1 | hypothetical protein | - |
| HHJ45_RS21580 () | 4481091..4481323 | + | 233 | Protein_4223 | DUF905 family protein | - |
| HHJ45_RS21585 () | 4481413..4482231 | + | 819 | WP_020923987.1 | DUF945 domain-containing protein | - |
| HHJ45_RS21590 () | 4482313..4482792 | + | 480 | WP_000860074.1 | antirestriction protein | - |
| HHJ45_RS21595 () | 4482808..4483284 | + | 477 | WP_136762736.1 | RadC family protein | - |
| HHJ45_RS21600 () | 4483347..4483568 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| HHJ45_RS21605 () | 4483642..4483986 | + | 345 | WP_024143552.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| HHJ45_RS21610 () | 4484023..4485294 | - | 1272 | WP_001534717.1 | group II intron reverse transcriptase/maturase | - |
| HHJ45_RS21615 () | 4485793..4485876 | + | 84 | Protein_4230 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| HHJ45_RS21620 () | 4485966..4486343 | + | 378 | WP_060565038.1 | type IV toxin-antitoxin system toxin CbtA | - |
| HHJ45_RS21625 () | 4486340..4486828 | + | 489 | WP_000761721.1 | hypothetical protein | - |
| HHJ45_RS21630 () | 4486840..4487037 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| HHJ45_RS21635 () | 4487134..4487706 | + | 573 | WP_001290246.1 | DUF4942 domain-containing protein | - |
| HHJ45_RS21640 () | 4488455..4489993 | + | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HHJ45_RS21645 () | 4490359..4491693 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HHJ45_RS21650 () | 4491773..4493920 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HHJ45_RS21655 () | 4493979..4495436 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| HHJ45_RS21660 () | 4495673..4497190 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HHJ45_RS21665 () | 4497309..4497482 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HHJ45_RS21670 () | 4497507..4497803 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HHJ45_RS21675 () | 4498030..4498302 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HHJ45_RS21680 () | 4498314..4498544 | - | 231 | WP_000371698.1 | (4Fe-4S)-binding protein | - |
| HHJ45_RS21685 () | 4498725..4500356 | + | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| HHJ45_RS21690 () | 4500353..4501072 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|