MGE detailed information
MGE type: Conjugative plasmid MGE length: 71222 bp
Accession: NZ_CP053082 Location: 1..71222 Organism: Escherichia coli strain HB37 Replicon: plasmid pHB37-2
Accession: NZ_CP053082 Location: 1..71222 Organism: Escherichia coli strain HB37 Replicon: plasmid pHB37-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKW69_RS26090 () | 109..357 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| HKW69_RS26095 () | 602..676 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| HKW69_RS26100 () | 669..1526 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| HKW69_RS26105 () | 2227..2367 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| HKW69_RS26110 () | 2465..3107 | + | 643 | Protein_4 | CPBP family intramembrane metalloprotease | - |
| HKW69_RS26115 () | 3200..3457 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HKW69_RS26120 () | 3390..3791 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HKW69_RS26125 () | 4040..4455 | + | 416 | Protein_7 | IS1 family transposase IS1R | Transposase |
| HKW69_RS26130 () | 4491..5036 | - | 546 | Protein_8 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HKW69_RS26135 () | 5102..5806 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HKW69_RS26140 () | 6262..7461 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| HKW69_RS26145 () | 7471..7659 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| HKW69_RS26150 () | 7751..8287 | + | 537 | WP_064441864.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HKW69_RS26155 () | 8470..9330 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HKW69_RS26160 () | 9500..10255 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| HKW69_RS26165 () | 10336..10617 | - | 282 | WP_015059004.1 | sodium/hydrogen exchanger | - |
| HKW69_RS26170 () | 10705..11409 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HKW69_RS26175 () | 11475..11540 | + | 66 | Protein_17 | IS1 family transposase | - |
| HKW69_RS26180 () | 12989..13223 | + | 235 | Protein_18 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HKW69_RS26185 () | 13351..13632 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| HKW69_RS26190 () | 13769..14104 | - | 336 | WP_099723228.1 | plasmid partitioning/stability family protein | - |
| HKW69_RS26195 () | 14107..15069 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| HKW69_RS26200 () | 15216..15509 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| HKW69_RS26205 () | 15586..16269 | + | 684 | WP_000085883.1 | DNA methylase | - |
| HKW69_RS26210 () | 16270..16491 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HKW69_RS26215 () | 16505..16939 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| HKW69_RS26220 () | 16990..17766 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| HKW69_RS26230 () | 18307..18609 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HKW69_RS26235 () | 18656..19078 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| HKW69_RS26240 () | 19075..19266 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| HKW69_RS26245 () | 19580..21247 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| HKW69_RS26250 () | 22647..22877 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HKW69_RS26255 () | 22929..24290 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| HKW69_RS26260 () | 24336..24899 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| HKW69_RS26265 () | 24985..25446 | - | 462 | WP_001479900.1 | hypothetical protein | - |
| HKW69_RS26270 () | 25748..26275 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| HKW69_RS26275 () | 26333..26566 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| HKW69_RS26280 () | 26627..28650 | + | 2024 | Protein_37 | ParB/RepB/Spo0J family partition protein | - |
| HKW69_RS26285 () | 28719..29153 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HKW69_RS26290 () | 29150..29869 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 29881..30105 | + | 225 | NuclAT_0 | - | - |
| - () | 29881..30105 | + | 225 | NuclAT_0 | - | - |
| - () | 29881..30105 | + | 225 | NuclAT_0 | - | - |
| - () | 29881..30105 | + | 225 | NuclAT_0 | - | - |
| HKW69_RS26295 () | 29890..30069 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 30038..30103 | + | 66 | - | - | Antitoxin Detail |
| HKW69_RS26300 () | 30149..30307 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HKW69_RS26960 () | 30545..30922 | - | 378 | Protein_42 | hypothetical protein | - |
| HKW69_RS26310 () | 31222..31518 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| HKW69_RS26315 () | 31629..32450 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| HKW69_RS26320 () | 32747..33394 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| HKW69_RS26325 () | 33671..34054 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| HKW69_RS26330 () | 34245..34931 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| HKW69_RS26335 () | 35025..35252 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| HKW69_RS26340 () | 35286..35651 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| HKW69_RS26345 () | 35666..35977 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HKW69_RS26350 () | 35999..36565 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| HKW69_RS26355 () | 36576..37280 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HKW69_RS26360 () | 37280..38707 | + | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| HKW69_RS26365 () | 38697..39287 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| HKW69_RS26370 () | 39241..39471 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| HKW69_RS26375 () | 39483..39734 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| HKW69_RS26380 () | 39731..40246 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HKW69_RS26385 () | 40381..40602 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| HKW69_RS26390 () | 40762..43389 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| HKW69_RS26395 () | 43386..43772 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| HKW69_RS26400 () | 43769..44401 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| HKW69_RS26405 () | 44398..45390 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| HKW69_RS26410 () | 45417..45725 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| HKW69_RS26415 () | 45788..46309 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| HKW69_RS26420 () | 46336..46974 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HKW69_RS26425 () | 46971..47342 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| HKW69_RS26430 () | 47368..47790 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| HKW69_RS26435 () | 47787..48923 | + | 1137 | Protein_68 | conjugal transfer protein TraN | - |
| HKW69_RS26440 () | 49011..50239 | + | 1229 | WP_166738926.1 | IS3 family transposase IS2 | Transposase |
| HKW69_RS26445 () | 50260..50973 | + | 714 | Protein_70 | conjugal transfer protein TraN | - |
| HKW69_RS26450 () | 51000..51257 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| HKW69_RS26455 () | 51250..51993 | + | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HKW69_RS26460 () | 52109..52390 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HKW69_RS26465 () | 52377..52925 | + | 549 | Protein_74 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HKW69_RS26470 () | 52915..53229 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| HKW69_RS26475 () | 53563..54937 | + | 1375 | Protein_76 | conjugal transfer protein TraH | - |
| HKW69_RS26480 () | 54934..57750 | + | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HKW69_RS26485 () | 57783..58304 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| HKW69_RS26490 () | 58329..59060 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| HKW69_RS26495 () | 59263..60000 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| HKW69_RS26500 () | 60051..62231 | + | 2181 | WP_021518883.1 | type IV conjugative transfer system coupling protein TraD | - |
| HKW69_RS26505 () | 62231..67501 | + | 5271 | WP_015059021.1 | Multifunctional conjugation protein TraI | Relaxase |
| HKW69_RS26510 () | 67521..68267 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| HKW69_RS26515 () | 68322..68882 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| HKW69_RS26520 () | 69014..69214 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| HKW69_RS26525 () | 69600..70199 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| HKW69_RS26530 () | 70363..70593 | + | 231 | WP_001736714.1 | hypothetical protein | - |
| - () | 70794..70853 | - | 60 | NuclAT_1 | - | - |
| - () | 70794..70853 | - | 60 | NuclAT_1 | - | - |
| - () | 70794..70853 | - | 60 | NuclAT_1 | - | - |
| - () | 70794..70853 | - | 60 | NuclAT_1 | - | - |
| HKW69_RS26535 () | 70898..71047 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|