MGE detailed information
MGE type: Prophage MGE length: 74951 bp
Accession: NZ_CP051849 Location: 4197493..4272443 Organism: Escherichia coli strain SCU-101 Replicon: chromosome
Accession: NZ_CP051849 Location: 4197493..4272443 Organism: Escherichia coli strain SCU-101 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ20_RS20330 (4193126) | 4193126..4194226 | + | 1101 | WP_001313577.1 | hypothetical protein | - |
| HHJ20_RS20335 (4194448) | 4194448..4194882 | + | 435 | WP_001560379.1 | hypothetical protein | - |
| HHJ20_RS20340 (4195100) | 4195100..4197496 | + | 2397 | WP_000544741.1 | dynamin family protein | - |
| HHJ20_RS20345 (4197493) | 4197493..4198398 | + | 906 | WP_000203555.1 | diguanylate cyclase regulator RdcB family protein | - |
| HHJ20_RS20350 (4198395) | 4198395..4199465 | + | 1071 | WP_000102646.1 | hypothetical protein | VF |
| HHJ20_RS20355 (4199594) | 4199594..4200061 | + | 468 | WP_001239911.1 | hypothetical protein | - |
| HHJ20_RS20360 (4200117) | 4200117..4200746 | + | 630 | WP_000680181.1 | hypothetical protein | - |
| HHJ20_RS20365 (4201181) | 4201181..4201633 | + | 453 | WP_000682723.1 | hypothetical protein | - |
| HHJ20_RS20370 (4201751) | 4201751..4201960 | + | 210 | WP_169711447.1 | DUF905 family protein | - |
| HHJ20_RS20375 (4202144) | 4202144..4202305 | + | 162 | WP_001571575.1 | hypothetical protein | - |
| HHJ20_RS20380 (4202309) | 4202309..4202941 | - | 633 | WP_021522614.1 | hypothetical protein | - |
| HHJ20_RS20385 (4203056) | 4203056..4203454 | - | 399 | WP_001281696.1 | Mor transcription activator family protein | - |
| HHJ20_RS20390 (4203426) | 4203426..4203875 | - | 450 | WP_001573929.1 | regulatory protein GemA | - |
| HHJ20_RS20395 (4203868) | 4203868..4204083 | - | 216 | WP_000123379.1 | hypothetical protein | - |
| HHJ20_RS20400 (4204073) | 4204073..4204303 | - | 231 | WP_000631814.1 | hypothetical protein | - |
| HHJ20_RS20405 (4204300) | 4204300..4204983 | - | 684 | WP_000131939.1 | DUF2786 domain-containing protein | - |
| HHJ20_RS20410 (4204980) | 4204980..4205285 | - | 306 | WP_000197789.1 | hypothetical protein | - |
| HHJ20_RS20415 (4205295) | 4205295..4205567 | - | 273 | WP_001774057.1 | hypothetical protein | - |
| HHJ20_RS20420 (4205856) | 4205856..4206386 | - | 531 | WP_001405163.1 | host-nuclease inhibitor Gam family protein | - |
| HHJ20_RS20425 (4206414) | 4206414..4206683 | - | 270 | WP_000843446.1 | hypothetical protein | - |
| HHJ20_RS20430 (4206686) | 4206686..4207852 | - | 1167 | WP_000960680.1 | AAA family ATPase | - |
| HHJ20_RS20435 (4207863) | 4207863..4209632 | - | 1770 | WP_001774059.1 | hypothetical protein ; Integrase | Integrase |
| HHJ20_RS20440 (4209636) | 4209636..4210547 | - | 912 | WP_000533819.1 | hypothetical protein | - |
| HHJ20_RS20445 (4210558) | 4210558..4210866 | - | 309 | WP_000047758.1 | helix-turn-helix domain-containing protein | - |
| HHJ20_RS20450 (4210919) | 4210919..4211107 | - | 189 | WP_000123378.1 | DNA-binding protein | - |
| HHJ20_RS20455 (4211088) | 4211088..4211546 | + | 459 | WP_224154089.1 | helix-turn-helix domain-containing protein | - |
| HHJ20_RS20460 (4211663) | 4211663..4212427 | - | 765 | WP_001573937.1 | DNA adenine methylase | - |
| HHJ20_RS20465 (4212619) | 4212619..4212834 | - | 216 | WP_001069609.1 | hypothetical protein | - |
| HHJ20_RS20470 (4212833) | 4212833..4213237 | + | 405 | WP_000972292.1 | hypothetical protein | - |
| HHJ20_RS20475 (4213213) | 4213213..4213956 | - | 744 | WP_000194949.1 | hypothetical protein | - |
| HHJ20_RS20480 (4214087) | 4214087..4214437 | + | 351 | WP_000793145.1 | putative holin | - |
| HHJ20_RS20485 (4214440) | 4214440..4215177 | + | 738 | WP_072665071.1 | transglycosylase SLT domain-containing protein | - |
| HHJ20_RS20490 (4215206) | 4215206..4215817 | + | 612 | WP_001299256.1 | hypothetical protein | - |
| HHJ20_RS20495 (4215814) | 4215814..4216140 | + | 327 | WP_000175097.1 | membrane protein | - |
| HHJ20_RS20500 (4216140) | 4216140..4216451 | + | 312 | WP_000227704.1 | hypothetical protein | - |
| HHJ20_RS20505 (4216454) | 4216454..4216996 | + | 543 | WP_000533684.1 | DUF3486 family protein | - |
| HHJ20_RS20510 (4216993) | 4216993..4218516 | + | 1524 | WP_000137893.1 | hypothetical protein | - |
| HHJ20_RS20515 (4218516) | 4218516..4220012 | + | 1497 | WP_169711448.1 | DUF935 domain-containing protein | - |
| HHJ20_RS20520 (4219993) | 4219993..4220814 | + | 822 | WP_000117556.1 | phage minor head protein | - |
| HHJ20_RS20525 (4220817) | 4220817..4221275 | + | 459 | WP_000135514.1 | phage virion morphogenesis protein | - |
| HHJ20_RS20530 (4221490) | 4221490..4222605 | + | 1116 | WP_001273074.1 | hypothetical protein | - |
| HHJ20_RS20535 (4222620) | 4222620..4223573 | + | 954 | WP_001286908.1 | hypothetical protein | - |
| HHJ20_RS20540 (4223583) | 4223583..4223921 | + | 339 | WP_000537457.1 | DUF2190 family protein | - |
| HHJ20_RS20545 (4223923) | 4223923..4224369 | + | 447 | WP_000271668.1 | DUF1320 domain-containing protein | - |
| HHJ20_RS20550 (4224369) | 4224369..4224833 | + | 465 | WP_001101804.1 | Gp37 family protein | - |
| HHJ20_RS20555 (4224833) | 4224833..4225084 | + | 252 | WP_000666499.1 | hypothetical protein | - |
| HHJ20_RS20560 (4225074) | 4225074..4226501 | + | 1428 | WP_000729834.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| HHJ20_RS20565 (4226498) | 4226498..4227022 | + | 525 | WP_162832341.1 | phage major tail tube protein | - |
| HHJ20_RS20570 (4227025) | 4227025..4227306 | + | 282 | WP_001513983.1 | hypothetical protein | - |
| HHJ20_RS20575 (4227404) | 4227404..4227739 | + | 336 | WP_000084213.1 | phage tail assembly protein | - |
| HHJ20_RS20585 (4227897) | 4227897..4231109 | + | 3213 | WP_169711449.1 | phage tail tape measure protein | - |
| HHJ20_RS20590 (4231109) | 4231109..4231993 | + | 885 | WP_000458387.1 | phage tail protein | - |
| HHJ20_RS20595 (4231993) | 4231993..4232205 | + | 213 | WP_000478224.1 | tail protein X | - |
| HHJ20_RS20600 (4232193) | 4232193..4233365 | + | 1173 | WP_001529032.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| HHJ20_RS20605 (4233362) | 4233362..4233958 | + | 597 | WP_000148265.1 | phage baseplate assembly protein V | - |
| HHJ20_RS20610 (4234013) | 4234013..4234360 | + | 348 | WP_000859116.1 | GPW/gp25 family protein | - |
| HHJ20_RS20615 (4234351) | 4234351..4235454 | + | 1104 | WP_001529034.1 | baseplate J/gp47 family protein | - |
| HHJ20_RS20620 (4235447) | 4235447..4236025 | + | 579 | WP_000138756.1 | phage tail protein I | - |
| HHJ20_RS20625 (4236028) | 4236028..4237674 | + | 1647 | Protein_4076 | tail fiber protein | - |
| HHJ20_RS20630 (4237959) | 4237959..4238573 | + | 615 | WP_001529037.1 | tail assembly chaperone | - |
| HHJ20_RS20635 (4238580) | 4238580..4239035 | - | 456 | WP_169711463.1 | phage tail protein | - |
| HHJ20_RS20640 (4239064) | 4239064..4239573 | - | 510 | Protein_4079 | phage tail protein | - |
| HHJ20_RS20645 (4239639) | 4239639..4240211 | + | 573 | WP_000904922.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| HHJ20_RS20650 (4240432) | 4240432..4241253 | + | 822 | WP_021567056.1 | DUF932 domain-containing protein | - |
| HHJ20_RS20655 (4241253) | 4241253..4241498 | + | 246 | WP_001164966.1 | hypothetical protein | - |
| HHJ20_RS20660 (4241592) | 4241592..4242065 | + | 474 | WP_001313575.1 | antirestriction protein | - |
| HHJ20_RS20665 (4242081) | 4242081..4242557 | + | 477 | WP_001186170.1 | RadC family protein | - |
| HHJ20_RS20670 (4242620) | 4242620..4242841 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| HHJ20_RS20675 (4242860) | 4242860..4243504 | + | 645 | WP_000086759.1 | hypothetical protein | - |
| HHJ20_RS20680 (4243554) | 4243554..4243928 | + | 375 | WP_001285482.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HHJ20_RS20685 (4243975) | 4243975..4244352 | + | 378 | WP_000854737.1 | TA system toxin CbtA family protein | Toxin Detail |
| HHJ20_RS20690 (4244349) | 4244349..4244841 | + | 493 | Protein_4089 | DUF5983 family protein | - |
| HHJ20_RS20695 (4244920) | 4244920..4245908 | - | 989 | Protein_4090 | IS630 family transposase IS630 | Transposase |
| HHJ20_RS20700 (4246056) | 4246056..4246244 | - | 189 | Protein_4091 | IS66 family transposase | - |
| HHJ20_RS20705 (4246305) | 4246305..4247438 | + | 1134 | WP_000555410.1 | IS110 family transposase ISEc45 | Transposase |
| HHJ20_RS20710 (4247825) | 4247825..4248958 | + | 1134 | WP_000555410.1 | IS110 family transposase ISEc45 | Transposase |
| HHJ20_RS20715 (4249345) | 4249345..4250478 | + | 1134 | WP_000555410.1 | IS110 family transposase ISEc45 | Transposase |
| HHJ20_RS20720 (4250732) | 4250732..4252136 | - | 1405 | Protein_4095 | IS66 family transposase ISEc47 | Transposase |
| HHJ20_RS20725 (4252167) | 4252167..4252517 | - | 351 | WP_000624707.1 | IS66 family transposase IS682 | Transposase |
| HHJ20_RS20730 (4252514) | 4252514..4252805 | - | 292 | Protein_4097 | IS66 family transposase ISEc43 | Transposase |
| HHJ20_RS26280 (4252847) | 4252847..4253041 | + | 195 | WP_001313570.1 | DUF957 domain-containing protein | - |
| HHJ20_RS20735 (4253123) | 4253123..4253980 | + | 858 | Protein_4099 | DUF4942 domain-containing protein | - |
| HHJ20_RS20745 (4254310) | 4254310..4255041 | - | 732 | WP_001308374.1 | DNA polymerase III subunit epsilon | - |
| HHJ20_RS20750 (4255106) | 4255106..4255573 | + | 468 | WP_000917878.1 | ribonuclease HI | - |
| HHJ20_RS20755 (4255570) | 4255570..4256292 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| HHJ20_RS20760 (4256326) | 4256326..4257081 | + | 756 | WP_001052735.1 | hydroxyacylglutathione hydrolase | - |
| HHJ20_RS20765 (4257153) | 4257153..4258511 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| HHJ20_RS20770 (4258560) | 4258560..4259330 | - | 771 | WP_000211716.1 | class I SAM-dependent methyltransferase | - |
| HHJ20_RS20775 (4259408) | 4259408..4260208 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| HHJ20_RS20780 (4260449) | 4260449..4261363 | + | 915 | WP_000648563.1 | HTH-type transcriptional regulator ArgP | VF |
| HHJ20_RS20785 (4261360) | 4261360..4262163 | - | 804 | WP_000997016.1 | 2,5-didehydrogluconate reductase DkgB | - |
| HHJ20_RS20820 (4267925) | 4267925..4268497 | - | 573 | WP_001140167.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| HHJ20_RS20825 (4268685) | 4268685..4269716 | + | 1032 | WP_000593994.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HHJ20_RS20830 (4269709) | 4269709..4270362 | + | 654 | WP_001294595.1 | methionine ABC transporter permease MetI | - |
| HHJ20_RS20835 (4270402) | 4270402..4271217 | + | 816 | WP_000874226.1 | hypothetical protein | VF |
| HHJ20_RS20840 (4271335) | 4271335..4271739 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| HHJ20_RS20845 (4271736) | 4271736..4272443 | + | 708 | WP_000094025.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| HHJ20_RS20850 (4272554) | 4272554..4274272 | + | 1719 | WP_001260694.1 | proline--tRNA ligase | - |
| HHJ20_RS20855 (4274325) | 4274325..4275149 | + | 825 | WP_000360468.1 | YaeF family permuted papain-like enzyme | - |
| HHJ20_RS20860 (4275244) | 4275244..4276587 | + | 1344 | Protein_4117 | IS3-like element IS1397 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|