MGE detailed information
MGE type: Conjugative plasmid MGE length: 80332 bp
Accession: NZ_CP051745 Location: 1..80332 Organism: Escherichia coli strain SCU-484 Replicon: plasmid pSCU-484-1
Accession: NZ_CP051745 Location: 1..80332 Organism: Escherichia coli strain SCU-484 Replicon: plasmid pSCU-484-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ53_RS24590 () | 1..1032 | + | 1032 | WP_000907863.1 | replication initiation protein | - |
| HHJ53_RS24595 () | 2100..2609 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| HHJ53_RS24600 () | 2665..3267 | - | 603 | WP_000517687.1 | hypothetical protein | - |
| HHJ53_RS24605 () | 3621..4967 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| HHJ53_RS24610 () | 5494..5796 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| HHJ53_RS24615 () | 5793..6419 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| HHJ53_RS24620 () | 6599..7870 | - | 1272 | WP_001744069.1 | Y-family DNA polymerase | - |
| HHJ53_RS24625 () | 7870..8307 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HHJ53_RS24630 () | 8304..8552 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HHJ53_RS24635 () | 8970..9872 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| HHJ53_RS24640 () | 9967..10302 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| HHJ53_RS24645 () | 10640..11620 | + | 981 | WP_001218106.1 | plasmid segregation protein ParM | - |
| HHJ53_RS24650 () | 11623..12045 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| HHJ53_RS24655 () | 12049..12360 | + | 312 | WP_033863049.1 | hypothetical protein | - |
| HHJ53_RS24660 () | 12436..13119 | + | 684 | WP_000086127.1 | DNA methylase | - |
| HHJ53_RS24665 () | 13120..13341 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| HHJ53_RS24670 () | 13355..13789 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| HHJ53_RS25215 () | 13834..14604 | + | 771 | WP_049008197.1 | hypothetical protein | - |
| HHJ53_RS24685 () | 15144..15446 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| HHJ53_RS24690 () | 15493..15915 | + | 423 | WP_015058200.1 | DUF1380 family protein | - |
| HHJ53_RS24695 () | 15912..16103 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HHJ53_RS24700 () | 16100..16486 | + | 387 | WP_169057929.1 | hypothetical protein | - |
| HHJ53_RS24705 () | 16870..17397 | + | 528 | WP_001276115.1 | single-stranded DNA-binding protein | - |
| HHJ53_RS24710 () | 17455..17688 | + | 234 | WP_000006016.1 | DUF905 domain-containing protein | - |
| HHJ53_RS24715 () | 17747..19705 | + | 1959 | WP_049011524.1 | ParB/RepB/Spo0J family partition protein | - |
| HHJ53_RS24720 () | 19760..20194 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HHJ53_RS24725 () | 20191..20910 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| HHJ53_RS24730 () | 20907..21503 | + | 597 | WP_024227064.1 | hypothetical protein | - |
| HHJ53_RS24740 () | 21966..22466 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| HHJ53_RS24745 () | 23195..23629 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| HHJ53_RS24750 () | 23723..23989 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HHJ53_RS24755 () | 24054..24944 | + | 891 | WP_049012067.1 | Recombination-promoting nuclease RpnA | VF |
| HHJ53_RS24760 () | 24944..25189 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| HHJ53_RS24765 () | 25220..25471 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| HHJ53_RS24770 () | 25505..25702 | - | 198 | WP_049012069.1 | hypothetical protein | - |
| HHJ53_RS24775 () | 26051..26899 | + | 849 | WP_024227041.1 | DUF4942 domain-containing protein | - |
| HHJ53_RS24780 () | 26985..27320 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HHJ53_RS24785 () | 27554..27886 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HHJ53_RS24790 () | 27897..30593 | + | 2697 | WP_106482418.1 | Protein TraI | Relaxase |
| HHJ53_RS24795 () | 30630..32921 | - | 2292 | WP_072291269.1 | conjugal transfer protein TrbC | - |
| HHJ53_RS24800 () | 32914..33984 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HHJ53_RS24805 () | 34003..35211 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| HHJ53_RS24810 () | 35429..36415 | - | 987 | WP_001257838.1 | hypothetical protein | - |
| - () | 36576..36631 | - | 56 | NuclAT_1 | - | - |
| - () | 36576..36631 | - | 56 | NuclAT_1 | - | - |
| - () | 36576..36631 | - | 56 | NuclAT_1 | - | - |
| - () | 36576..36631 | - | 56 | NuclAT_1 | - | - |
| - () | 36872..36929 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36872..36929 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36872..36929 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 36872..36929 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| HHJ53_RS24815 () | 36984..37136 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| HHJ53_RS24820 () | 37208..37459 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| HHJ53_RS24825 () | 37759..38055 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| HHJ53_RS24830 () | 38120..38296 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| HHJ53_RS24835 () | 38628..38837 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| HHJ53_RS24840 () | 38909..39571 | - | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HHJ53_RS24845 () | 39642..41810 | - | 2169 | WP_023518847.1 | DotA/TraY family protein | - |
| HHJ53_RS24850 () | 41907..42491 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| HHJ53_RS24855 () | 42520..43722 | - | 1203 | WP_049010202.1 | IncI1-type conjugal transfer protein TraW | - |
| HHJ53_RS24860 () | 43689..44303 | - | 615 | WP_075203745.1 | IncI1-type conjugal transfer protein TraV | - |
| HHJ53_RS24865 () | 44303..47347 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| HHJ53_RS24870 () | 47437..48237 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HHJ53_RS24875 () | 48221..48409 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HHJ53_RS24880 () | 48473..48877 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| HHJ53_RS24885 () | 48928..49455 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HHJ53_RS24890 () | 49455..50159 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| HHJ53_RS24895 () | 50159..51448 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| HHJ53_RS24900 () | 51451..52434 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| HHJ53_RS24905 () | 52445..53137 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| HHJ53_RS24910 () | 53134..53481 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HHJ53_RS24915 () | 53499..57266 | - | 3768 | WP_049011477.1 | DNA primase | - |
| HHJ53_RS24920 () | 57356..57907 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| HHJ53_RS24925 () | 57922..58212 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| HHJ53_RS24930 () | 58209..59357 | - | 1149 | WP_001024974.1 | putative protein YggR | VF |
| HHJ53_RS24935 () | 59354..60172 | - | 819 | WP_001611721.1 | hypothetical protein | VF |
| HHJ53_RS24940 () | 60169..60627 | - | 459 | WP_001079805.1 | hypothetical protein | VF |
| HHJ53_RS24945 () | 61022..61606 | - | 585 | WP_001611722.1 | histidine phosphatase family protein | - |
| HHJ53_RS24950 () | 61666..62868 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| HHJ53_RS24955 () | 62954..63778 | - | 825 | WP_049011476.1 | hypothetical protein | - |
| HHJ53_RS24960 () | 63986..64111 | + | 126 | Protein_72 | transposase | - |
| HHJ53_RS24965 () | 64168..65460 | - | 1293 | WP_049011475.1 | hypothetical protein | VF |
| HHJ53_RS24970 () | 65460..66116 | - | 657 | WP_001401940.1 | hypothetical protein | VF |
| HHJ53_RS24975 () | 66101..66661 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| HHJ53_RS24980 () | 66671..67285 | - | 615 | WP_169057931.1 | hypothetical protein | VF |
| HHJ53_RS24985 () | 67302..68387 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HHJ53_RS24990 () | 68400..69953 | - | 1554 | WP_001545756.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HHJ53_RS24995 () | 69964..70416 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| HHJ53_RS25000 () | 70403..71698 | - | 1296 | WP_022630888.1 | type 4b pilus protein PilO2 | - |
| HHJ53_RS25005 () | 71691..73373 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HHJ53_RS25010 () | 73387..73824 | - | 438 | WP_001545758.1 | hypothetical protein | VF |
| HHJ53_RS25015 () | 73824..74891 | - | 1068 | WP_024144162.1 | hypothetical protein | VF |
| HHJ53_RS25020 () | 75512..75799 | - | 288 | WP_016245575.1 | hypothetical protein | - |
| HHJ53_RS25025 () | 75841..76095 | - | 255 | WP_021520380.1 | PilI type IV pilus biogenesis protein | - |
| HHJ53_RS25030 () | 76257..76808 | - | 552 | WP_022630885.1 | hypothetical protein | - |
| HHJ53_RS25035 () | 76981..77664 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| HHJ53_RS25040 () | 77917..78450 | - | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| HHJ53_RS25045 () | 78892..79179 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HHJ53_RS25050 () | 79097..79360 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|