MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 66467 bp
Accession: NZ_CP051729 Location: 1..66467 Organism: Escherichia coli strain SCU-111 Replicon: plasmid pSCU-111-2
Accession: NZ_CP051729 Location: 1..66467 Organism: Escherichia coli strain SCU-111 Replicon: plasmid pSCU-111-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ28_RS23760 () | 1..858 | + | 858 | WP_169062150.1 | incFII family plasmid replication initiator RepA | - |
| HHJ28_RS23765 () | 1762..2353 | + | 592 | Protein_2 | CPBP family intramembrane metalloprotease | - |
| HHJ28_RS23770 () | 2446..2703 | + | 258 | WP_069356978.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HHJ28_RS23775 () | 2636..3037 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HHJ28_RS23780 () | 3128..3196 | + | 69 | Protein_5 | recombinase family protein | - |
| HHJ28_RS23785 () | 3282..4185 | - | 904 | Protein_6 | transposase | - |
| HHJ28_RS23790 () | 4178..4567 | - | 390 | Protein_7 | recombinase family protein | - |
| HHJ28_RS23795 () | 4861..5013 | - | 153 | WP_072033162.1 | Hok/Gef family protein | - |
| HHJ28_RS23800 () | 5215..5592 | - | 378 | WP_086258910.1 | M15 family metallopeptidase | - |
| HHJ28_RS23805 () | 6250..6618 | - | 369 | Protein_10 | IS21 family transposase IS21 | Transposase |
| HHJ28_RS23810 () | 6660..7058 | + | 399 | Protein_11 | IS21 family transposase IS21 | Transposase |
| HHJ28_RS24335 () | 7059..7529 | - | 471 | Protein_12 | tricarballylate utilization protein TcuB | - |
| HHJ28_RS23820 () | 7516..8825 | - | 1310 | Protein_13 | FAD-dependent tricarballylate dehydrogenase TcuA | - |
| HHJ28_RS23825 () | 8923..9826 | - | 904 | Protein_14 | HTH-type transcriptional regulator CatM | VF |
| HHJ28_RS23830 () | 9940..10097 | - | 158 | Protein_15 | transposase | - |
| HHJ28_RS23835 () | 10544..18355 | + | 7812 | WP_169062152.1 | hypothetical protein | VF |
| HHJ28_RS23840 () | 19042..19569 | + | 528 | WP_169062153.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| HHJ28_RS23845 () | 19849..20157 | - | 309 | Protein_18 | IS3 family transposase ISCfr6 | Transposase |
| HHJ28_RS23850 () | 20174..21250 | - | 1077 | WP_038989268.1 | IS110 family transposase ISEc21 | Transposase |
| HHJ28_RS23855 () | 21532..22436 | - | 905 | Protein_20 | IS3 family transposase | - |
| HHJ28_RS23860 () | 22542..23105 | - | 564 | WP_169062154.1 | pentapeptide repeat-containing protein | - |
| HHJ28_RS23865 () | 23109..23840 | - | 732 | WP_169062155.1 | ATP-binding cassette domain-containing protein | - |
| HHJ28_RS23870 () | 23837..24562 | - | 726 | WP_169062156.1 | microcin B17 immunity protein McbE | - |
| HHJ28_RS23875 () | 24572..25762 | - | 1191 | WP_169062157.1 | YcaO-like family protein | - |
| HHJ28_RS23880 () | 25743..26561 | - | 819 | WP_169062158.1 | SagB/ThcOx family dehydrogenase | - |
| HHJ28_RS23885 () | 26563..27450 | - | 888 | WP_169062159.1 | McbB family protein | - |
| HHJ28_RS23890 () | 27477..27677 | - | 201 | WP_000420495.1 | microcin B17 | - |
| HHJ28_RS23895 () | 28423..28692 | + | 270 | WP_000079931.1 | hypothetical protein | Antitoxin Detail |
| HHJ28_RS23900 () | 28689..28970 | + | 282 | WP_169062160.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HHJ28_RS23905 () | 29055..29402 | + | 348 | WP_000142451.1 | hypothetical protein | - |
| HHJ28_RS23910 () | 29422..30012 | - | 591 | WP_042077527.1 | hypothetical protein | - |
| HHJ28_RS23915 () | 30012..30269 | - | 258 | WP_169062161.1 | hypothetical protein | - |
| HHJ28_RS23920 () | 30598..31050 | + | 453 | WP_000670961.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| HHJ28_RS23925 () | 31083..32615 | - | 1533 | WP_001017348.1 | NAD(P)-binding domain-containing protein | - |
| HHJ28_RS23930 () | 32612..32881 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| HHJ28_RS23935 () | 32883..33899 | - | 1017 | WP_016230896.1 | Gfo/Idh/MocA family oxidoreductase | - |
| HHJ28_RS23940 () | 33899..34729 | - | 831 | WP_016230897.1 | HAD-IIB family hydrolase | - |
| HHJ28_RS23945 () | 34713..35951 | - | 1239 | WP_024188128.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| HHJ28_RS23950 () | 36770..37183 | + | 414 | WP_001554354.1 | hypothetical protein | - |
| HHJ28_RS23955 () | 37185..37967 | + | 783 | WP_001164199.1 | site-specific integrase | - |
| HHJ28_RS23960 () | 38140..38493 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| HHJ28_RS23965 () | 38543..39358 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| HHJ28_RS23970 () | 39601..40128 | + | 528 | WP_000203268.1 | colicin B immunity protein | - |
| HHJ28_RS23975 () | 40146..41681 | - | 1536 | WP_001282376.1 | pore-forming bacteriocin colicin B | - |
| HHJ28_RS23980 () | 42122..42634 | + | 513 | WP_001027529.1 | hypothetical protein | - |
| HHJ28_RS23985 () | 42785..43135 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| HHJ28_RS23990 () | 43138..44100 | - | 963 | WP_000959880.1 | plasmid segregation protein ParM | - |
| HHJ28_RS23995 () | 44247..44540 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| HHJ28_RS24000 () | 44617..45300 | + | 684 | WP_000085940.1 | DNA methylase | - |
| HHJ28_RS24005 () | 45301..45522 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| HHJ28_RS24010 () | 45536..45970 | + | 435 | WP_000274486.1 | DUF1380 family protein | - |
| HHJ28_RS24340 () | 46015..46785 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| HHJ28_RS24025 () | 47321..47623 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HHJ28_RS24030 () | 47670..48092 | + | 423 | WP_000271682.1 | DUF1380 family protein | - |
| HHJ28_RS24035 () | 48089..48280 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HHJ28_RS24040 () | 49319..49549 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HHJ28_RS24045 () | 49601..50962 | + | 1362 | WP_169062162.1 | DUF3560 domain-containing protein | - |
| HHJ28_RS24050 () | 51009..51572 | + | 564 | WP_096037668.1 | class I SAM-dependent methyltransferase | - |
| HHJ28_RS24055 () | 51716..52498 | - | 783 | WP_097748551.1 | IS21 family transposase IS100kyp | Transposase |
| HHJ28_RS24060 () | 52495..53517 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| HHJ28_RS24065 () | 53641..55893 | + | 2253 | WP_169062163.1 | type IV conjugative transfer system coupling protein TraD | - |
| HHJ28_RS24070 () | 55902..56300 | - | 399 | WP_097336710.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HHJ28_RS24075 () | 56300..56527 | - | 228 | WP_000450526.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HHJ28_RS24080 () | 56609..61879 | + | 5271 | WP_169062164.1 | Multifunctional conjugation protein TraI | Relaxase |
| HHJ28_RS24085 () | 61899..62645 | + | 747 | WP_169062165.1 | conjugal transfer pilus acetylase TraX | - |
| HHJ28_RS24090 () | 62700..63260 | + | 561 | WP_040084627.1 | fertility inhibition protein FinO | - |
| HHJ28_RS24095 () | 63396..63608 | + | 213 | WP_040084624.1 | hypothetical protein | - |
| HHJ28_RS24100 () | 63854..64315 | + | 462 | WP_040084621.1 | thermonuclease family protein | - |
| HHJ28_RS24105 () | 64384..64569 | + | 186 | WP_040084637.1 | hypothetical protein | - |
| HHJ28_RS24110 () | 64608..65198 | + | 591 | WP_040084619.1 | DUF2726 domain-containing protein | - |
| - () | 65373..65429 | - | 57 | NuclAT_0 | - | - |
| - () | 65373..65429 | - | 57 | NuclAT_0 | - | - |
| - () | 65373..65429 | - | 57 | NuclAT_0 | - | - |
| - () | 65373..65429 | - | 57 | NuclAT_0 | - | - |
| HHJ28_RS24115 () | 65477..65626 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HHJ28_RS24120 () | 65910..66167 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|