MGE detailed information

MGE type: Conjugative plasmid        MGE length: 189717 bp
Accession: NZ_CP051728        Location: 1..189717         Organism: Escherichia coli strain SCU-111       Replicon: plasmid pSCU-111-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HHJ28_RS22800 () 1..858 + 858 WP_169062068.1 incFII family plasmid replication initiator RepA -
HHJ28_RS22805 () 1773..2042 + 270 WP_048889353.1 hypothetical protein Antitoxin Detail
HHJ28_RS22810 () 2039..2320 + 282 WP_169062069.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HHJ28_RS22815 () 2366..3208 + 843 Protein_4 3'-5' exonuclease -
HHJ28_RS22820 () 3169..3627 + 459 WP_169062137.1 hypothetical protein -
HHJ28_RS22825 () 4331..5104 - 774 WP_169062070.1 tannase/feruloyl esterase family alpha/beta hydrolase -
HHJ28_RS22830 () 5270..5815 - 546 WP_169062138.1 isopentenyl-diphosphate Delta-isomerase -
HHJ28_RS22835 () 5909..6625 - 717 WP_087888581.1 DUF554 domain-containing protein -
HHJ28_RS22840 () 6643..7212 - 570 WP_087888585.1 UbiX family flavin prenyltransferase -
HHJ28_RS22845 () 7238..8710 - 1473 WP_169062071.1 UbiD family decarboxylase -
HHJ28_RS22850 () 8876..9820 + 945 WP_169062072.1 LysR family transcriptional regulator -
HHJ28_RS22855 () 9952..10398 + 447 WP_096959008.1 YhbP family protein -
HHJ28_RS22860 () 10857..11657 + 801 WP_169062139.1 IS3 family transposase IS3F Transposase
HHJ28_RS22865 () 12387..12938 + 552 WP_096037716.1 hypothetical protein VF
HHJ28_RS22870 () 13013..13813 - 801 WP_169062073.1 Outer membrane protein A VF
HHJ28_RS22875 () 13847..15745 - 1899 WP_169062074.1 Autotransporter adhesin SadA VF
HHJ28_RS22880 () 16795..18924 + 2130 Protein_17 hypothetical protein -
HHJ28_RS22885 () 19776..19886 - 111 Protein_18 hypothetical protein -
HHJ28_RS22890 () 20271..20660 + 390 Protein_19 D-threitol dehydrogenase VF
HHJ28_RS22895 () 20738..21793 + 1056 WP_169062075.1 NAD(P)-dependent alcohol dehydrogenase -
HHJ28_RS22900 () 21836..22606 - 771 WP_106907055.1 SDR family oxidoreductase -
HHJ28_RS22905 () 22749..23642 + 894 WP_169062076.1 HTH-type transcriptional regulator PgrR VF
HHJ28_RS22910 () 23678..26812 - 3135 WP_106907051.1 Multidrug efflux pump subunit AcrB VF
HHJ28_RS22915 () 26819..27988 - 1170 WP_169062140.1 Multidrug efflux pump subunit AcrA VF
HHJ28_RS22920 () 28017..28358 - 342 WP_169062077.1 helix-turn-helix domain-containing protein -
HHJ28_RS22925 () 28427..28681 - 255 WP_106907159.1 DUF1471 domain-containing protein -
HHJ28_RS22930 () 28951..30000 - 1050 WP_169062078.1 NAD(P)-dependent alcohol dehydrogenase -
HHJ28_RS22935 () 30067..30689 - 623 Protein_28 aldo/keto reductase -
HHJ28_RS22940 () 30692..31450 - 759 Protein_29 alpha/beta fold hydrolase -
HHJ28_RS22945 () 31558..32142 - 585 WP_106907155.1 flavodoxin -
HHJ28_RS22950 () 32152..32913 - 762 WP_047626660.1 carboxymuconolactone decarboxylase family protein -
HHJ28_RS22955 () 32891..33370 - 480 WP_114502118.1 cupin domain-containing protein -
HHJ28_RS22960 () 33527..34720 - 1194 WP_106907176.1 multidrug effflux MFS transporter -
HHJ28_RS22965 () 34966..35253 + 288 WP_106907153.1 NAD(P)H-binding protein -
HHJ28_RS22970 () 35218..35475 - 258 Protein_35 hypothetical protein -
HHJ28_RS22975 () 35544..36740 - 1197 WP_169062079.1 IS110 family transposase ISEc20 Transposase
HHJ28_RS22980 () 37137..37835 - 699 Protein_37 Tn3 family transposase TnpA_ISSba14 Transposase
HHJ28_RS22985 () 37928..38755 - 828 WP_169062080.1 SDR family oxidoreductase -
HHJ28_RS22990 () 38822..39970 - 1149 WP_169062081.1 iron-containing alcohol dehydrogenase -
HHJ28_RS22995 () 40104..41060 + 957 WP_211201814.1 HTH-type transcriptional regulator DmlR VF
HHJ28_RS23000 () 41386..42162 - 777 WP_106907061.1 NAD-dependent glycerol dehydrogenase VF
HHJ28_RS23005 () 42353..43375 + 1023 WP_000255956.1 IS21 family transposase IS100kyp Transposase
HHJ28_RS23010 () 43372..44154 + 783 WP_097748551.1 IS21 family transposase IS100kyp Transposase
HHJ28_RS23015 () 44198..44446 - 249 WP_169062082.1 Dabb family protein -
HHJ28_RS23020 () 44458..45519 - 1062 WP_106907065.1 NAD(P)-dependent alcohol dehydrogenase -
HHJ28_RS23025 () 45668..46627 + 960 WP_106907067.1 HTH-type transcriptional regulator DmlR VF
HHJ28_RS23030 () 47284..47502 + 219 WP_000813639.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
HHJ28_RS23035 () 47504..47809 + 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
HHJ28_RS23040 () 47810..48616 + 807 WP_077781165.1 site-specific integrase -
HHJ28_RS23045 () 49174..49929 + 756 WP_169062083.1 replication initiation protein RepE -
HHJ28_RS23050 () 50777..51409 + 633 WP_000312330.1 ParA family protein -
HHJ28_RS23055 () 51409..51783 + 375 WP_042021187.1 hypothetical protein -
HHJ28_RS23060 () 51961..52419 + 459 WP_000526115.1 IS200-IS605 family transposase IS200C Transposase
HHJ28_RS23065 () 52735..53709 + 975 WP_097469860.1 StbA family protein -
HHJ28_RS23070 () 53713..54105 + 393 WP_000272016.1 plasmid partitioning/stability family protein -
HHJ28_RS23075 () 54240..54368 - 129 Protein_56 DinI family protein -
HHJ28_RS23080 () 54786..55535 + 750 Protein_57 DUF1281 domain-containing protein -
HHJ28_RS24310 () 55495..55974 - 480 WP_211201816.1 hypothetical protein -
HHJ28_RS23085 () 56475..56705 + 231 WP_000218642.1 hypothetical protein -
HHJ28_RS23090 () 56757..58118 + 1362 WP_096924479.1 DUF3560 domain-containing protein -
HHJ28_RS23095 () 58167..58730 + 564 WP_001346267.1 class I SAM-dependent methyltransferase -
HHJ28_RS24315 () 58711..59043 - 333 WP_211201815.1 pilus protein -
HHJ28_RS23105 () 59526..60047 + 522 WP_169062084.1 single-stranded DNA-binding protein -
HHJ28_RS23110 () 60110..60343 + 234 WP_000005990.1 DUF905 family protein -
HHJ28_RS23115 () 60407..62365 + 1959 WP_169062085.1 ParB/RepB/Spo0J family partition protein -
HHJ28_RS23120 () 62420..62854 + 435 WP_000845926.1 conjugation system SOS inhibitor PsiB -
HHJ28_RS23125 () 62851..63336 + 486 Protein_67 plasmid SOS inhibition protein A -
HHJ28_RS23130 () 63421..64443 + 1023 WP_000255956.1 IS21 family transposase IS100kyp Transposase
HHJ28_RS23135 () 64440..65222 + 783 WP_097748551.1 IS21 family transposase IS100kyp Transposase
HHJ28_RS23140 () 65290..66378 + 1089 Protein_70 Tn3 family transposase TnpA_TnEc1 Transposase
HHJ28_RS23145 () 66378..66557 + 180 Protein_71 Serine protease pet autotransporter VF
HHJ28_RS23150 () 66663..67165 - 503 Protein_72 hypothetical protein VF
HHJ28_RS24320 () 67160..67652 - 493 Protein_73 transposase -
HHJ28_RS23155 () 68017..68214 + 198 WP_169062086.1 toxin-antitoxin system protein -
HHJ28_RS23160 () 68728..68892 - 165 WP_169062087.1 DUF1378 family protein -
HHJ28_RS23165 () 69136..69405 - 270 Protein_76 transposase -
HHJ28_RS24325 () 69540..70494 + 955 Protein_77 IS3 family transposase IS629 Transposase
HHJ28_RS23175 () 70492..71241 + 750 Protein_78 IS21 family transposase IS21 Transposase
HHJ28_RS23180 () 71263..71721 + 459 Protein_79 IS21 family transposase IS21 Transposase
HHJ28_RS23185 () 71893..72078 - 186 Protein_80 IS66 family insertion sequence element accessory protein TnpB -
HHJ28_RS23190 () 72352..72729 - 378 Protein_81 IS110 family transposase -
HHJ28_RS23195 () 72761..74191 - 1431 Protein_82 IS66 family transposase ISCro1 Transposase
HHJ28_RS23200 () 74194..74781 + 588 Protein_83 IS91 family transposase ISMno23 Transposase
HHJ28_RS23205 () 75508..75978 - 471 WP_169062142.1 helix-turn-helix transcriptional regulator -
HHJ28_RS23210 () 77175..77426 + 252 WP_169062088.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
HHJ28_RS23215 () 77423..77710 + 288 WP_169062089.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
HHJ28_RS23220 () 78259..78336 + 78 Protein_87 IS66 family insertion sequence element accessory protein TnpB -
HHJ28_RS23225 () 78336..78474 + 139 Protein_88 IS21 family transposase ISSso4 Transposase
HHJ28_RS23230 () 78569..79107 - 539 Protein_89 IS21 family transposase -
HHJ28_RS23235 () 79201..80367 + 1167 WP_169062090.1 plasmid-partitioning protein SopA -
HHJ28_RS23240 () 80367..81338 + 972 WP_169062091.1 ParB/RepB/Spo0J family plasmid partition protein -
HHJ28_RS23245 () 82160..82633 - 474 WP_169062092.1 DUF2919 family protein -
HHJ28_RS23250 () 82630..84546 - 1917 WP_169062143.1 UDP-glucose:protein N-beta-glucosyltransferase VF
HHJ28_RS23255 () 84629..88930 - 4302 WP_169062093.1 Heme/hemopexin-binding protein VF
HHJ28_RS23260 () 89021..90814 - 1794 WP_169062094.1 Heme/hemopexin transporter protein HuxB VF
HHJ28_RS23265 () 91854..92066 - 213 WP_169062095.1 hypothetical protein -
HHJ28_RS23270 () 92203..92763 - 561 WP_169062096.1 fertility inhibition protein FinO -
HHJ28_RS23275 () 92818..93550 - 733 Protein_98 conjugal transfer pilus acetylase TraX -
HHJ28_RS23280 () 93594..95747 - 2154 WP_169062097.1 peptidase domain-containing ABC transporter -
HHJ28_RS23285 () 95749..96969 - 1221 WP_169062098.1 HlyD family efflux transporter periplasmic adaptor subunit -
HHJ28_RS23290 () 97002..97574 - 573 WP_169062099.1 hypothetical protein -
HHJ28_RS23295 () 98227..103497 - 5271 WP_169062100.1 Multifunctional conjugation protein TraI Relaxase
HHJ28_RS23300 () 103579..103806 + 228 WP_000450526.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
HHJ28_RS23305 () 103806..104204 + 399 WP_097336710.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
HHJ28_RS23310 () 104213..106411 - 2199 WP_169062101.1 type IV conjugative transfer system coupling protein TraD -
HHJ28_RS23315 () 106462..107199 - 738 WP_169062102.1 hypothetical protein -
HHJ28_RS23320 () 107402..108133 - 732 WP_169062144.1 complement resistance protein TraT -
HHJ28_RS23325 () 108173..108676 - 504 WP_169062103.1 conjugal transfer entry exclusion protein TraS -
HHJ28_RS23330 () 108709..111546 - 2838 WP_169062104.1 conjugal transfer mating pair stabilization protein TraG -
HHJ28_RS23335 () 111543..112916 - 1374 WP_169062105.1 conjugal transfer protein TraH -
HHJ28_RS23340 () 112916..113317 - 402 WP_169062106.1 F-type conjugal transfer protein TrbF -
HHJ28_RS23345 () 113271..113612 - 342 WP_074434702.1 P-type conjugative transfer protein TrbJ -
HHJ28_RS23350 () 113542..114087 - 546 WP_062891431.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
HHJ28_RS23355 () 114074..114355 - 282 WP_021499471.1 type-F conjugative transfer system pilin chaperone TraQ -
HHJ28_RS23360 () 114412..115557 + 1146 WP_169062107.1 hypothetical protein -
HHJ28_RS23365 () 115989..116345 - 357 WP_062891432.1 conjugal transfer protein TrbA -
HHJ28_RS23370 () 116477..116842 - 366 WP_062891433.1 hypothetical protein -
HHJ28_RS23375 () 116856..117599 - 744 WP_001030371.1 type-F conjugative transfer system pilin assembly protein TraF -
HHJ28_RS23380 () 117592..117849 - 258 WP_129552346.1 conjugal transfer protein TrbE -
HHJ28_RS23385 () 117885..119735 - 1851 WP_096035219.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
HHJ28_RS23390 () 119732..120154 - 423 WP_059320930.1 HNH endonuclease -
HHJ28_RS23395 () 120546..121184 - 639 WP_059320931.1 type-F conjugative transfer system pilin assembly protein TrbC -
HHJ28_RS23400 () 121211..121744 - 534 WP_096035228.1 hypothetical protein -
HHJ28_RS23405 () 122430..123422 - 993 WP_169062108.1 conjugal transfer pilus assembly protein TraU -
HHJ28_RS23410 () 123419..124051 - 633 WP_096035217.1 type-F conjugative transfer system protein TraW -
HHJ28_RS23415 () 124048..124434 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
HHJ28_RS23420 () 124431..127061 - 2631 WP_169062109.1 type IV secretion system protein TraC -
HHJ28_RS23425 () 127872..128345 - 474 WP_123008598.1 hypothetical protein -
HHJ28_RS23430 () 128338..128751 - 414 WP_000549581.1 hypothetical protein -
HHJ28_RS23435 () 128744..128965 - 222 WP_001278695.1 conjugal transfer protein TraR -
HHJ28_RS23440 () 129100..129615 - 516 WP_096035212.1 type IV conjugative transfer system lipoprotein TraV -
HHJ28_RS23445 () 129612..129863 - 252 WP_001038341.1 conjugal transfer protein TrbG -
HHJ28_RS23450 () 129856..130209 - 354 WP_096847078.1 conjugal transfer protein TrbD -
HHJ28_RS23455 () 130163..130726 - 564 WP_169062110.1 conjugal transfer protein TraP -
HHJ28_RS23460 () 130716..132167 - 1452 WP_096035210.1 conjugal transfer protein TraB -
HHJ28_RS23465 () 132167..132871 - 705 WP_169062145.1 type-F conjugative transfer system secretin TraK -
HHJ28_RS23470 () 132882..133448 - 567 WP_096035208.1 type IV conjugative transfer system protein TraE -
HHJ28_RS23475 () 133470..133781 - 312 WP_169062111.1 type IV conjugative transfer system protein TraL -
HHJ28_RS23480 () 133796..134161 - 366 WP_136763423.1 type IV conjugative transfer system pilin TraA -
HHJ28_RS23485 () 134194..134589 - 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
HHJ28_RS23490 () 134688..135377 - 690 WP_000283378.1 conjugal transfer transcriptional regulator TraJ -
HHJ28_RS23495 () 135564..135947 - 384 WP_169062112.1 relaxosome protein TraM -
HHJ28_RS23500 () 136268..136870 + 603 WP_169062113.1 hypothetical protein VF
HHJ28_RS23505 () 137167..137988 - 822 WP_169062146.1 DUF945 domain-containing protein -
HHJ28_RS23510 () 138107..138394 - 288 WP_000107542.1 hypothetical protein -
HHJ28_RS23515 () 138550..138852 - 303 WP_169062114.1 hypothetical protein -
HHJ28_RS24330 () 138876..139082 - 207 WP_000275848.1 hypothetical protein -
HHJ28_RS23525 () 139747..139905 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 139949..140173 - 225 NuclAT_0 - -
- () 139949..140173 - 225 NuclAT_0 - -
- () 139949..140173 - 225 NuclAT_0 - -
- () 139949..140173 - 225 NuclAT_0 - -
HHJ28_RS23530 () 139985..140173 + 189 WP_169062067.1 protein sok -
HHJ28_RS23535 () 140142..140424 - 283 Protein_150 plasmid SOS inhibition protein A -
HHJ28_RS23540 () 140491..141273 - 783 WP_097748551.1 IS21 family transposase IS100kyp Transposase
HHJ28_RS23545 () 141270..142256 - 987 WP_169062115.1 IS21 family transposase IS100kyp Transposase
HHJ28_RS23550 () 142238..142864 + 627 Protein_153 hypothetical protein -
HHJ28_RS23555 () 143184..143663 + 480 WP_024130283.1 GNAT family N-acetyltransferase -
HHJ28_RS23560 () 144119..145140 + 1022 Protein_155 IS110 family transposase -
HHJ28_RS23565 () 145553..146560 - 1008 WP_169062116.1 apolipoprotein acyltransferase -
HHJ28_RS23570 () 146817..147455 - 639 WP_169062117.1 putative ABC transporter ATP-binding protein YknY VF
HHJ28_RS23575 () 147448..148212 - 765 WP_169062118.1 ABC transporter -
HHJ28_RS23580 () 148169..149311 - 1143 WP_169062119.1 TolC family protein -
HHJ28_RS23585 () 149374..150465 - 1092 WP_169062120.1 hypothetical protein -
HHJ28_RS23590 () 150626..150988 - 363 WP_169062121.1 hypothetical protein -
HHJ28_RS23595 () 151526..151999 - 474 WP_169062092.1 DUF2919 family protein -
HHJ28_RS23600 () 151996..153912 - 1917 WP_169062143.1 UDP-glucose:protein N-beta-glucosyltransferase VF
HHJ28_RS23605 () 153995..163246 - 9252 WP_169062122.1 Heme/hemopexin-binding protein VF
HHJ28_RS23610 () 163337..165130 - 1794 WP_169062094.1 Heme/hemopexin transporter protein HuxB VF
HHJ28_RS23615 () 165754..166302 - 549 WP_169062123.1 hypothetical protein VF
HHJ28_RS23620 () 166317..167126 - 810 WP_169062124.1 Cytolethal distending toxin subunit B VF
HHJ28_RS23625 () 167123..167899 - 777 WP_169062125.1 Cytolethal distending toxin subunit A VF
HHJ28_RS23630 () 169325..170551 + 1227 WP_169062126.1 phosphoadenosine phosphosulfate reductase -
HHJ28_RS23635 () 170536..171180 + 645 WP_169062127.1 ParB N-terminal domain-containing protein -
HHJ28_RS23640 () 171367..172846 + 1480 Protein_171 IS21 family transposase ISEc10 Transposase
HHJ28_RS23645 () 172843..173598 + 756 WP_169062128.1 IS21 family transposase ISEc10 Transposase
HHJ28_RS23650 () 173792..173980 - 189 Protein_173 transposase domain-containing protein -
HHJ28_RS23655 () 174041..174409 + 369 Protein_174 IS110 family transposase ISEc45 Transposase
HHJ28_RS23660 () 174454..175077 - 624 Protein_175 IS3 family transposase IS629 Transposase
HHJ28_RS23665 () 175079..175285 + 207 Protein_176 IS91 family transposase -
HHJ28_RS23670 () 175693..176043 - 351 WP_000127484.1 addiction module antitoxin -
HHJ28_RS23675 () 176040..176375 - 336 WP_169062129.1 type II toxin-antitoxin system RelE/ParE family toxin -
HHJ28_RS23680 () 176848..177641 + 794 Protein_179 3-methyl-2-oxobutanoate hydroxymethyltransferase -
HHJ28_RS23685 () 177646..177783 - 138 WP_169062130.1 hypothetical protein -
HHJ28_RS23690 () 178013..179209 - 1197 WP_169062131.1 IS110 family transposase ISEc20 Transposase
HHJ28_RS23695 () 179704..179811 - 108 Protein_182 IS3 family transposase -
HHJ28_RS23700 () 180185..180457 + 273 Protein_183 IS3 family transposase ISKpn1 Transposase
HHJ28_RS23705 () 180876..181184 + 309 WP_169062132.1 hypothetical protein VF
HHJ28_RS23710 () 181214..182959 + 1746 WP_169062147.1 NERD domain-containing protein -
HHJ28_RS23715 () 183252..183389 + 138 Protein_186 IS3 family transposase ISEc31 Transposase
HHJ28_RS23720 () 183472..183825 - 354 WP_169062133.1 hypothetical protein -
HHJ28_RS23725 () 184092..184445 - 354 WP_169062134.1 DUF2919 family protein -
HHJ28_RS23730 () 184666..185511 - 846 Protein_189 hypothetical protein VF
HHJ28_RS23735 () 185484..185558 - 75 WP_169062148.1 ESPR domain-containing protein -
HHJ28_RS23740 () 185649..187295 - 1647 WP_169062135.1 Heme/hemopexin transporter protein HuxB VF
HHJ28_RS23745 () 187361..188557 - 1197 WP_169062079.1 IS110 family transposase ISEc20 Transposase
HHJ28_RS23750 () 189156..189413 + 258 WP_169062136.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance