MGE detailed information
MGE type: Prophage MGE length: 39898 bp
Accession: NZ_CP051694 Location: 2162793..2202690 Organism: Escherichia coli strain SCU-313 Replicon: chromosome
Accession: NZ_CP051694 Location: 2162793..2202690 Organism: Escherichia coli strain SCU-313 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ46_RS10185 () | 2159517..2159969 | + | 453 | WP_076611058.1 | dihydroneopterin triphosphate diphosphatase | - |
| HHJ46_RS10190 () | 2159998..2160738 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HHJ46_RS10195 () | 2160773..2161294 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HHJ46_RS10200 () | 2161296..2161898 | - | 603 | WP_001024936.1 | YebB family permuted papain-like enzyme | - |
| HHJ46_RS10205 () | 2161969..2162034 | + | 66 | WP_072123646.1 | stress response small protein YobI | - |
| HHJ46_RS10210 () | 2162173..2162784 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| HHJ46_RS10215 () | 2162793..2163803 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HHJ46_RS10220 () | 2163955..2164740 | - | 786 | WP_000571478.1 | hypothetical protein | VF |
| HHJ46_RS10225 () | 2164737..2165492 | - | 756 | WP_000202988.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HHJ46_RS10230 () | 2165571..2166503 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HHJ46_RS10235 () | 2166519..2167841 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| HHJ46_RS10240 () | 2167961..2168932 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| HHJ46_RS10245 () | 2169064..2170506 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| HHJ46_RS10250 () | 2170634..2171503 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| HHJ46_RS10255 () | 2171841..2173316 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| HHJ46_RS10260 () | 2173551..2175362 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| HHJ46_RS10265 () | 2175399..2176040 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HHJ46_RS10270 () | 2176095..2177273 | - | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HHJ46_RS10275 () | 2177407..2177697 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| HHJ46_RS10280 () | 2177764..2178120 | + | 357 | WP_001295500.1 | protein YebF | - |
| HHJ46_RS10285 () | 2178447..2179106 | + | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| HHJ46_RS10290 () | 2179270..2180439 | - | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| HHJ46_RS10295 () | 2180496..2180921 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| HHJ46_RS10300 () | 2181078..2183138 | + | 2061 | WP_001542239.1 | oligopeptidase B | - |
| HHJ46_RS10305 () | 2183135..2183797 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| HHJ46_RS10310 () | 2183821..2184477 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| HHJ46_RS10315 () | 2184579..2184809 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HHJ46_RS10320 () | 2184948..2185322 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| HHJ46_RS10325 () | 2185326..2186198 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| HHJ46_RS10330 () | 2186211..2186552 | + | 342 | WP_000976481.1 | YebY family protein | - |
| - () | 2186580..2186851 | - | 272 | - | - | Antitoxin Detail |
| - () | 2186710..2186813 | + | 104 | - | - | Toxin Detail |
| HHJ46_RS10335 () | 2186948..2187604 | + | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| HHJ46_RS10340 () | 2187605..2187796 | - | 192 | WP_001296140.1 | YebW family protein | - |
| HHJ46_RS10345 () | 2187901..2188137 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| HHJ46_RS10350 () | 2188255..2189694 | - | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HHJ46_RS10355 () | 2189774..2192407 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| HHJ46_RS10360 () | 2192376..2193659 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| HHJ46_RS10365 () | 2193789..2194286 | + | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| HHJ46_RS10370 () | 2194383..2195081 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| HHJ46_RS10375 () | 2195101..2197149 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| HHJ46_RS10380 () | 2197341..2198222 | + | 882 | WP_000984517.1 | protease HtpX | - |
| HHJ46_RS10385 () | 2198268..2199641 | - | 1374 | WP_001309553.1 | MFS transporter | - |
| HHJ46_RS10390 () | 2199818..2200609 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| HHJ46_RS10395 () | 2200753..2200991 | - | 239 | Protein_2031 | hypothetical protein | - |
| HHJ46_RS10400 () | 2201150..2201293 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| HHJ46_RS10405 () | 2201368..2201655 | + | 288 | WP_001006866.1 | YebO family protein | - |
| HHJ46_RS10410 () | 2202325..2202468 | + | 144 | WP_001295496.1 | YobF family protein | - |
| HHJ46_RS10415 () | 2202481..2202690 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HHJ46_RS10420 () | 2202856..2203665 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HHJ46_RS10425 () | 2203662..2204228 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| HHJ46_RS10430 () | 2204657..2205115 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| HHJ46_RS10435 () | 2205170..2206021 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| HHJ46_RS10440 () | 2206034..2206834 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|