MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 120420 bp
Accession: NZ_CP051388 Location: 1..120420 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 24350 Replicon: plasmid p24350-2
Accession: NZ_CP051388 Location: 1..120420 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 24350 Replicon: plasmid p24350-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFR97_RS24315 () | 1..5271 | + | 5271 | WP_000986969.1 | conjugative transfer relaxase/helicase TraI | - |
| HFR97_RS24320 () | 5291..6037 | + | 747 | WP_000205745.1 | conjugal transfer pilus acetylase TraX | - |
| HFR97_RS24325 () | 6096..6956 | + | 861 | WP_000704512.1 | alpha/beta hydrolase | - |
| HFR97_RS24330 () | 7059..7616 | + | 558 | WP_000139312.1 | fertility inhibition protein FinO | - |
| HFR97_RS24335 () | 7771..7974 | + | 204 | WP_001327131.1 | hypothetical protein | - |
| HFR97_RS24340 () | 8717..9178 | + | 462 | WP_000760078.1 | thermonuclease family protein | - |
| HFR97_RS24345 () | 9886..10092 | + | 207 | WP_001553767.1 | type I toxin-antitoxin system Hok family toxin | - |
| HFR97_RS24350 () | 10376..10624 | + | 249 | WP_000083835.1 | replication regulatory protein RepA | - |
| HFR97_RS24355 () | 10871..10945 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| HFR97_RS24360 () | 10938..11714 | + | 777 | WP_015059632.1 | IncF replication protein RepA1 | - |
| HFR97_RS24365 () | 12628..12897 | + | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| HFR97_RS24370 () | 12894..13175 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFR97_RS24375 () | 13260..13607 | + | 348 | WP_001115718.1 | hypothetical protein | - |
| HFR97_RS24380 () | 13625..14215 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| HFR97_RS24385 () | 14215..14469 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| HFR97_RS24390 () | 14821..15246 | + | 426 | Protein_15 | DUF4238 domain-containing protein | - |
| HFR97_RS24395 () | 15415..16623 | - | 1209 | WP_000198533.1 | IS91 family transposase | - |
| HFR97_RS24400 () | 16604..16876 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| HFR97_RS24405 () | 17091..17906 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| HFR97_RS24410 () | 17943..18521 | + | 579 | Protein_19 | DUF4238 domain-containing protein | - |
| HFR97_RS24415 () | 18697..19041 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| HFR97_RS24420 () | 19627..20331 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| HFR97_RS24425 () | 20384..20491 | - | 108 | Protein_22 | recombinase family protein | - |
| HFR97_RS24430 () | 20617..23502 | + | 2886 | WP_001138082.1 | Tn3 family transposase | - |
| HFR97_RS24435 () | 23572..24447 | + | 876 | WP_001201005.1 | acyl-CoA--6-aminopenicillanic acid acyl-transferase | - |
| HFR97_RS24440 () | 24601..25416 | - | 816 | WP_000018321.1 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| HFR97_RS24445 () | 25752..26588 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| HFR97_RS24450 () | 26588..27391 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| HFR97_RS24455 () | 27677..28885 | + | 1209 | WP_001352368.1 | IS4-like element ISVsa5 family transposase | - |
| HFR97_RS24460 () | 28901..29020 | - | 120 | Protein_29 | LysR family transcriptional regulator | - |
| HFR97_RS24465 () | 29251..30456 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| HFR97_RS24470 () | 30900..31220 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| HFR97_RS24475 () | 31213..31599 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| HFR97_RS24480 () | 31607..32293 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| HFR97_RS24485 () | 32271..32893 | - | 623 | Protein_34 | tetracycline resistance transcriptional repressor TetR(B) | - |
| HFR97_RS24490 () | 32975..34180 | + | 1206 | WP_001089064.1 | tetracycline efflux MFS transporter Tet(B) | - |
| HFR97_RS24495 () | 34293..34885 | - | 593 | Protein_36 | tetracyline resistance-associated transcriptional repressor TetC | - |
| HFR97_RS24500 () | 34973..35335 | + | 363 | WP_000275181.1 | helix-turn-helix domain-containing protein | - |
| HFR97_RS24505 () | 35329..35601 | - | 273 | Protein_38 | IS1 family transposase | - |
| HFR97_RS24510 () | 35725..37128 | + | 1404 | WP_072135327.1 | DNA cytosine methyltransferase | - |
| HFR97_RS24515 () | 37162..38376 | - | 1215 | WP_001532073.1 | type II site-specific deoxyribonuclease | - |
| HFR97_RS24520 () | 38671..39375 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| HFR97_RS24525 () | 39440..40320 | + | 881 | Protein_42 | IS66-like element ISEc43 family transposase | - |
| HFR97_RS24530 () | 40450..40722 | + | 273 | WP_071526560.1 | transcriptional regulator | - |
| HFR97_RS24535 () | 41168..41343 | + | 176 | Protein_44 | IS3 family transposase | - |
| HFR97_RS24540 () | 41569..42738 | - | 1170 | WP_001072359.1 | hypothetical protein | - |
| HFR97_RS24545 () | 43105..43293 | + | 189 | WP_032141192.1 | hypothetical protein | - |
| HFR97_RS24550 () | 43414..44154 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| HFR97_RS24555 () | 44433..45410 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| HFR97_RS24560 () | 46153..46476 | + | 324 | Protein_49 | helix-turn-helix domain-containing protein | - |
| HFR97_RS24565 () | 46478..46582 | + | 105 | Protein_50 | AAA family ATPase | - |
| HFR97_RS24570 () | 46643..47156 | + | 514 | Protein_51 | DUF4113 domain-containing protein | - |
| HFR97_RS24575 () | 47336..48022 | - | 687 | Protein_52 | IS1 family transposase | - |
| HFR97_RS24580 () | 48378..49292 | + | 915 | WP_000949005.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| HFR97_RS24585 () | 49292..50119 | + | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| HFR97_RS24590 () | 50116..50973 | + | 858 | WP_001101723.1 | iron/manganese ABC transporter permease subunit SitC | - |
| HFR97_RS24595 () | 50970..51827 | + | 858 | WP_000968139.1 | iron/manganese ABC transporter permease subunit SitD | - |
| HFR97_RS24600 () | 52061..52318 | - | 258 | Protein_57 | Tn3 family transposase | - |
| HFR97_RS24605 () | 52316..52729 | + | 414 | Protein_58 | phosphopyruvate hydratase | - |
| HFR97_RS24610 () | 53070..53450 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| HFR97_RS24615 () | 53830..55023 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| HFR97_RS24620 () | 55159..56883 | + | 1725 | WP_000602863.1 | NIS family aerobactin synthetase IucA | - |
| HFR97_RS24625 () | 56884..57831 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase IucB | - |
| HFR97_RS24630 () | 57831..59573 | + | 1743 | WP_001015721.1 | NIS family aerobactin synthetase IucC | - |
| HFR97_RS24635 () | 59570..60847 | + | 1278 | WP_000750130.1 | NADPH-dependent L-lysine N(6)-monooxygenase IucD | - |
| HFR97_RS24640 () | 60929..63130 | + | 2202 | WP_000973519.1 | ferric aerobactin receptor IutA | - |
| HFR97_RS24645 () | 63412..64634 | + | 1223 | WP_165419135.1 | IS3-like element IS2 family transposase | - |
| HFR97_RS24650 () | 64685..65371 | + | 687 | Protein_67 | IS1 family transposase | - |
| HFR97_RS24655 () | 65625..66647 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| HFR97_RS24660 () | 66632..68197 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| HFR97_RS24665 () | 68272..68688 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HFR97_RS24670 () | 68685..68915 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HFR97_RS24675 () | 69543..69761 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HFR97_RS24680 () | 69763..70068 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HFR97_RS24685 () | 70069..70875 | + | 807 | WP_000016970.1 | site-specific integrase | - |
| HFR97_RS24690 () | 71597..72352 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HFR97_RS24695 () | 72940..74106 | + | 1167 | WP_015059580.1 | plasmid-partitioning protein SopA | - |
| HFR97_RS24700 () | 74106..75077 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HFR97_RS24705 () | 75815..76717 | + | 903 | WP_077632859.1 | DUF1281 domain-containing protein | - |
| HFR97_RS24710 () | 76714..77025 | + | 312 | WP_032141194.1 | hypothetical protein | - |
| HFR97_RS24715 () | 77101..77784 | + | 684 | WP_000085871.1 | DNA methylase | - |
| HFR97_RS24720 () | 77785..78006 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| HFR97_RS24725 () | 78020..78454 | + | 435 | WP_000274502.1 | DUF1380 family protein | - |
| HFR97_RS24730 () | 78499..79269 | + | 771 | WP_001006209.1 | hypothetical protein | - |
| HFR97_RS24735 () | 79686..80111 | + | 426 | WP_001198927.1 | antirestriction protein | - |
| HFR97_RS24740 () | 80158..80580 | + | 423 | WP_000271751.1 | DUF1380 family protein | - |
| HFR97_RS24745 () | 80577..80768 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| HFR97_RS24750 () | 81803..82033 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HFR97_RS24755 () | 82085..83446 | + | 1362 | WP_000170724.1 | DUF3560 domain-containing protein | - |
| HFR97_RS24760 () | 83494..84057 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| HFR97_RS24765 () | 84083..84298 | + | 216 | WP_015059639.1 | hypothetical protein | - |
| HFR97_RS24770 () | 84709..84915 | + | 207 | WP_024190028.1 | hypothetical protein | - |
| HFR97_RS24775 () | 84941..85393 | + | 453 | WP_000290843.1 | single-stranded DNA-binding protein | - |
| HFR97_RS24780 () | 85456..85689 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| HFR97_RS24785 () | 85755..87713 | + | 1959 | Protein_94 | ParB/RepB/Spo0J family partition protein | - |
| HFR97_RS24790 () | 87768..88202 | + | 435 | WP_000845932.1 | conjugation system SOS inhibitor PsiB | - |
| HFR97_RS24795 () | 88199..88918 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| HFR97_RS24800 () | 89175..90544 | + | 1370 | WP_085947770.1 | IS3-like element IS150 family transposase | - |
| HFR97_RS24805 () | 90644..90802 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | - |
| HFR97_RS24810 () | 91022..91251 | + | 230 | Protein_99 | hypothetical protein | - |
| HFR97_RS24815 () | 91812..92009 | + | 198 | WP_052318758.1 | hypothetical protein | - |
| HFR97_RS24820 () | 92129..92950 | + | 822 | WP_001234423.1 | DUF945 domain-containing protein | - |
| HFR97_RS24825 () | 93247..93849 | - | 603 | WP_000243710.1 | transglycosylase SLT domain-containing protein | - |
| HFR97_RS24830 () | 94170..94553 | + | 384 | WP_001151528.1 | relaxosome protein TraM | - |
| HFR97_RS24835 () | 94740..95429 | + | 690 | WP_000283383.1 | conjugal transfer transcriptional regulator TraJ | - |
| HFR97_RS24840 () | 95528..95923 | + | 396 | WP_001366159.1 | conjugal transfer relaxosome protein TraY | - |
| HFR97_RS24845 () | 95956..96318 | + | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| HFR97_RS24850 () | 96323..96634 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HFR97_RS24855 () | 96656..97222 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HFR97_RS24860 () | 97233..97937 | + | 705 | WP_148935590.1 | type-F conjugative transfer system secretin TraK | - |
| HFR97_RS24865 () | 97937..99388 | + | 1452 | WP_000146659.1 | conjugal transfer protein TraB | - |
| HFR97_RS24870 () | 99357..99938 | + | 582 | WP_023565182.1 | conjugal transfer protein TraP | - |
| HFR97_RS24875 () | 99877..100245 | + | 369 | WP_071526483.1 | DUF2689 domain-containing protein | - |
| HFR97_RS24880 () | 100238..100489 | + | 252 | WP_001038331.1 | conjugal transfer protein TrbG | - |
| HFR97_RS24885 () | 100486..101001 | + | 516 | WP_000809885.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HFR97_RS24890 () | 101136..101357 | + | 222 | WP_001278686.1 | conjugal transfer protein TraR | - |
| HFR97_RS24895 () | 101517..104144 | + | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| HFR97_RS24900 () | 104141..104527 | + | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| HFR97_RS24905 () | 104524..105156 | + | 633 | WP_001203750.1 | type-F conjugative transfer system protein TraW | - |
| HFR97_RS24910 () | 105153..106145 | + | 993 | WP_000830835.1 | conjugal transfer pilus assembly protein TraU | - |
| HFR97_RS24915 () | 106154..106792 | + | 639 | WP_000777690.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HFR97_RS24920 () | 106789..108597 | + | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HFR97_RS24925 () | 108624..108881 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| HFR97_RS24930 () | 108874..109617 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HFR97_RS24935 () | 109633..109980 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| HFR97_RS24940 () | 109982..110296 | - | 315 | WP_000415566.1 | protein ArtA | - |
| HFR97_RS24945 () | 110377..110661 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HFR97_RS24950 () | 110648..111193 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HFR97_RS24955 () | 111123..111464 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| HFR97_RS24960 () | 111418..111831 | + | 414 | WP_001331260.1 | F-type conjugal transfer protein TrbF | - |
| HFR97_RS24965 () | 111828..113204 | + | 1377 | WP_000982840.1 | conjugal transfer protein TraH | - |
| HFR97_RS24970 () | 113201..116023 | + | 2823 | WP_001007016.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HFR97_RS24975 () | 116039..116536 | + | 498 | WP_000605859.1 | entry exclusion protein | - |
| HFR97_RS24980 () | 116568..117299 | + | 732 | WP_023565183.1 | complement resistance protein TraT | - |
| HFR97_RS24985 () | 117552..119705 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| HFR97_RS24990 () | 119714..120112 | - | 399 | WP_000911313.1 | tRNA(fMet)-specific endonuclease VapC | - |
| HFR97_RS24995 () | 120112..120339 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|