MGE detailed information
MGE type: Prophage MGE length: 39622 bp
Accession: NZ_CP051001 Location: 1454383..1494004 Organism: Escherichia coli O157:H16 str. 98-3133 Replicon: chromosome
Accession: NZ_CP051001 Location: 1454383..1494004 Organism: Escherichia coli O157:H16 str. 98-3133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BY40_RS07060 (1449507) | 1449507..1449950 | - | 444 | WP_000786398.1 | DNA polymerase III subunit chi | - |
| BY40_RS07065 (1450304) | 1450304..1451815 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| BY40_RS07070 (1451969) | 1451969..1452019 | + | 51 | WP_211180521.1 | protein YtgA | - |
| BY40_RS07075 (1452082) | 1452082..1453182 | + | 1101 | WP_000584109.1 | LPS export ABC transporter permease LptF | - |
| BY40_RS07080 (1453182) | 1453182..1454264 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| BY40_RS07085 (1454383) | 1454383..1455885 | - | 1503 | WP_001332879.1 | DUF853 domain-containing protein | - |
| BY40_RS07090 (1456015) | 1456015..1457034 | - | 1020 | WP_000061768.1 | NADPH-dependent aldehyde reductase Ahr | - |
| BY40_RS07100 (1457405) | 1457405..1459315 | + | 1911 | WP_000083138.1 | hypothetical protein ; Integrase | Integrase |
| BY40_RS07105 (1459448) | 1459448..1459780 | - | 333 | WP_001261095.1 | NIPSNAP family protein | - |
| BY40_RS07110 (1460786) | 1460786..1461252 | - | 467 | Protein_1385 | DUF1643 domain-containing protein | - |
| BY40_RS07115 (1461445) | 1461445..1462005 | + | 561 | WP_000190110.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| BY40_RS07120 (1462019) | 1462019..1462864 | + | 846 | WP_000331917.1 | hypothetical protein | - |
| BY40_RS07125 (1462925) | 1462925..1463419 | - | 495 | WP_000145203.1 | membrane protein | - |
| BY40_RS07130 (1463660) | 1463660..1464124 | + | 465 | WP_000749342.1 | helix-turn-helix transcriptional regulator | - |
| BY40_RS07135 (1465162) | 1465162..1465986 | + | 825 | WP_000594911.1 | hypothetical protein | - |
| BY40_RS07140 (1466035) | 1466035..1466607 | - | 573 | WP_000227281.1 | hypothetical protein | - |
| BY40_RS07145 (1466708) | 1466708..1466965 | + | 258 | Protein_1392 | IS3 family transposase IS911 | Transposase |
| BY40_RS07150 (1466978) | 1466978..1468129 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| BY40_RS24150 (1468126) | 1468126..1468206 | - | 81 | Protein_1394 | hypothetical protein | - |
| BY40_RS07155 (1468194) | 1468194..1469098 | + | 905 | Protein_1395 | IS3 family transposase | - |
| BY40_RS07160 (1469181) | 1469181..1469438 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| BY40_RS07165 (1469996) | 1469996..1470763 | - | 768 | WP_000175457.1 | hypothetical protein | VF |
| BY40_RS07170 (1470764) | 1470764..1471720 | - | 957 | WP_000684856.1 | hypothetical protein | VF |
| BY40_RS07175 (1471717) | 1471717..1472715 | - | 999 | WP_000125187.1 | hypothetical protein | VF |
| BY40_RS07180 (1472712) | 1472712..1473614 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| BY40_RS07185 (1473659) | 1473659..1475983 | - | 2325 | WP_000188267.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| BY40_RS07190 (1476070) | 1476070..1477023 | - | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| BY40_RS07195 (1477020) | 1477020..1477541 | - | 522 | WP_001283626.1 | hypothetical protein | VF |
| BY40_RS07200 (1477678) | 1477678..1477746 | + | 69 | WP_211180522.1 | protein YkiE | - |
| BY40_RS07205 (1477833) | 1477833..1478530 | + | 698 | Protein_1405 | IS1-like element IS1F family transposase | - |
| BY40_RS24155 (1478675) | 1478675..1478821 | + | 147 | Protein_1406 | IS3 family transposase | - |
| BY40_RS07215 (1478848) | 1478848..1478952 | + | 105 | Protein_1407 | IS3 family transposase | - |
| BY40_RS07220 (1479267) | 1479267..1479548 | + | 282 | WP_223349491.1 | biofilm development regulator YmgB/AriR family protein | - |
| BY40_RS07225 (1479868) | 1479868..1479999 | - | 132 | Protein_1409 | IS3 family transposase | - |
| BY40_RS07230 (1480281) | 1480281..1480472 | + | 192 | Protein_1410 | hypothetical protein | - |
| BY40_RS07235 (1480690) | 1480690..1480815 | - | 126 | Protein_1411 | hemolysin activation protein | - |
| BY40_RS07240 (1481563) | 1481563..1481769 | + | 207 | Protein_1412 | autotransporter adhesin family protein | - |
| BY40_RS07245 (1481890) | 1481890..1483425 | + | 1536 | WP_000939409.1 | protein YeeR | - |
| BY40_RS07250 (1483410) | 1483410..1483580 | + | 171 | Protein_1414 | antirestriction protein | - |
| BY40_RS07255 (1483596) | 1483596..1484072 | + | 477 | WP_001186774.1 | RadC family protein | - |
| BY40_RS07260 (1484135) | 1484135..1484356 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| BY40_RS07265 (1484519) | 1484519..1484887 | + | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| BY40_RS07270 (1484977) | 1484977..1485351 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| BY40_RS07275 (1485348) | 1485348..1485836 | + | 489 | WP_000777547.1 | DUF5983 family protein | - |
| BY40_RS07280 (1485848) | 1485848..1486045 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| BY40_RS07285 (1486130) | 1486130..1486279 | + | 150 | Protein_1421 | restriction endonuclease subunit M | - |
| BY40_RS24160 (1487047) | 1487047..1487190 | - | 144 | Protein_1422 | HNH endonuclease | - |
| BY40_RS07290 (1487327) | 1487327..1487977 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| BY40_RS07295 (1487985) | 1487985..1488965 | - | 981 | WP_000991415.1 | sialate O-acetylesterase | - |
| BY40_RS07300 (1489030) | 1489030..1490136 | - | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| BY40_RS07305 (1490156) | 1490156..1490872 | - | 717 | WP_001443018.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| BY40_RS07310 (1492328) | 1492328..1492930 | + | 603 | WP_000790583.1 | hypothetical protein | VF |
| BY40_RS07315 (1493408) | 1493408..1494004 | + | 597 | WP_000044711.1 | hypothetical protein | VF |
| BY40_RS07320 (1494485) | 1494485..1495033 | + | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| BY40_RS07325 (1495098) | 1495098..1495637 | + | 540 | WP_000824105.1 | fimbrial protein | - |
| BY40_RS07330 (1495674) | 1495674..1496399 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|