MGE detailed information
MGE type: Prophage MGE length: 54669 bp
Accession: NZ_CP050173 Location: 1845807..1900475 Organism: Escherichia coli strain STB20-1 Replicon: chromosome
Accession: NZ_CP050173 Location: 1845807..1900475 Organism: Escherichia coli strain STB20-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIP50_RS08740 () | 1841675..1841725 | - | 51 | WP_001364200.1 | his operon leader peptide | - |
| FIP50_RS08745 () | 1842150..1842974 | + | 825 | WP_000754737.1 | SDR family oxidoreductase | - |
| FIP50_RS08750 () | 1843020..1843949 | + | 930 | WP_000803351.1 | LysR family transcriptional regulator | - |
| FIP50_RS08755 () | 1844164..1844226 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
| FIP50_RS08760 () | 1844216..1845574 | + | 1359 | WP_000019197.1 | putrescine/proton symporter PlaP | - |
| FIP50_RS08765 () | 1845753..1846811 | + | 1059 | WP_064670362.1 | transport protein YeeE | - |
| FIP50_RS08770 () | 1846825..1847052 | + | 228 | WP_000985273.1 | sulfurtransferase TusA family protein | - |
| FIP50_RS08775 () | 1847095..1848519 | - | 1425 | WP_085438546.1 | exodeoxyribonuclease I | - |
| FIP50_RS08780 () | 1848701..1849879 | + | 1179 | WP_151044111.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FIP50_RS08785 () | 1849860..1850051 | - | 192 | WP_000132739.1 | AlpA family phage regulatory protein | - |
| FIP50_RS08790 () | 1850082..1850249 | - | 168 | WP_032320906.1 | hypothetical protein | - |
| FIP50_RS08795 () | 1850322..1850606 | - | 285 | WP_122991675.1 | ASCH domain-containing protein | - |
| FIP50_RS08800 () | 1850599..1850817 | - | 219 | WP_151044108.1 | hypothetical protein | - |
| FIP50_RS08805 () | 1850814..1850999 | - | 186 | WP_001276453.1 | hypothetical protein | - |
| FIP50_RS08810 () | 1851002..1851772 | - | 771 | WP_151044106.1 | DUF551 domain-containing protein | - |
| FIP50_RS08815 () | 1851777..1852055 | - | 279 | Protein_1721 | hypothetical protein | - |
| FIP50_RS08825 () | 1852472..1852684 | - | 213 | Protein_1722 | hypothetical protein | - |
| FIP50_RS08830 () | 1852681..1852845 | - | 165 | WP_001214456.1 | DUF2737 family protein | - |
| FIP50_RS08835 () | 1852856..1853149 | - | 294 | WP_001111298.1 | DUF2856 family protein | - |
| FIP50_RS08840 () | 1853163..1853669 | - | 507 | WP_000168274.1 | single-stranded DNA-binding protein | - |
| FIP50_RS08845 () | 1853670..1854377 | - | 708 | WP_053880671.1 | recombinase | - |
| FIP50_RS08850 () | 1854386..1854556 | - | 171 | WP_000050554.1 | hypothetical protein | - |
| FIP50_RS08855 () | 1854632..1854784 | - | 153 | WP_001243353.1 | host cell division inhibitory peptide Kil | - |
| FIP50_RS08860 () | 1854769..1854900 | - | 132 | WP_000638547.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| FIP50_RS08865 () | 1854925..1855893 | - | 969 | WP_000005785.1 | hypothetical protein | - |
| FIP50_RS08870 () | 1856082..1856447 | - | 366 | WP_000392415.1 | hypothetical protein | - |
| FIP50_RS08875 () | 1856507..1856758 | - | 252 | WP_000394305.1 | hypothetical protein | - |
| FIP50_RS08880 () | 1856767..1857072 | - | 306 | WP_151140369.1 | hypothetical protein | - |
| FIP50_RS08885 () | 1857440..1857808 | - | 369 | WP_000233125.1 | hypothetical protein | - |
| FIP50_RS08890 () | 1857826..1858542 | - | 717 | WP_000428318.1 | helix-turn-helix domain-containing protein | - |
| FIP50_RS08895 () | 1858649..1858843 | + | 195 | WP_000620665.1 | hypothetical protein | - |
| FIP50_RS08900 () | 1858952..1859245 | + | 294 | WP_000251073.1 | lambda phage CII family protein | - |
| FIP50_RS08905 () | 1859278..1859439 | + | 162 | WP_000166956.1 | hypothetical protein | - |
| FIP50_RS08910 () | 1859426..1860316 | + | 891 | WP_151140370.1 | DNA replication protein | - |
| FIP50_RS08915 () | 1860306..1862771 | + | 2466 | WP_151140371.1 | helicase DnaB | - |
| FIP50_RS08920 () | 1862848..1863288 | + | 441 | WP_151140372.1 | recombination protein NinB | - |
| FIP50_RS08925 () | 1863285..1863458 | + | 174 | WP_000984218.1 | hypothetical protein | - |
| FIP50_RS08930 () | 1863425..1863601 | + | 177 | WP_000113772.1 | NinE family protein | - |
| FIP50_RS08935 () | 1863604..1863963 | + | 360 | WP_001363895.1 | DUF2591 domain-containing protein | - |
| FIP50_RS08940 () | 1863956..1864132 | + | 177 | WP_000950963.1 | protein ninF | - |
| FIP50_RS08945 () | 1864125..1864735 | + | 611 | Protein_1746 | recombination protein NinG | - |
| FIP50_RS08950 () | 1864732..1864938 | + | 207 | WP_000144614.1 | phage NinH family protein | - |
| FIP50_RS08955 () | 1864916..1865587 | + | 672 | WP_078204257.1 | serine/threonine protein phosphatase | - |
| FIP50_RS08960 () | 1865578..1866096 | + | 519 | WP_000512808.1 | DUF1133 family protein | - |
| FIP50_RS08965 () | 1866694..1867017 | + | 324 | WP_015966862.1 | phage holin, lambda family | - |
| FIP50_RS08970 () | 1867001..1867477 | + | 477 | WP_000229392.1 | glycoside hydrolase family protein | - |
| FIP50_RS08975 () | 1867474..1867911 | + | 438 | WP_151140374.1 | lysis protein | - |
| FIP50_RS08980 () | 1867899..1868051 | + | 153 | WP_001139680.1 | hypothetical protein | - |
| FIP50_RS08985 () | 1868257..1868781 | + | 525 | WP_089583698.1 | Rha family transcriptional regulator | - |
| FIP50_RS08990 () | 1869082..1869324 | + | 243 | WP_000807780.1 | DUF2560 family protein | - |
| FIP50_RS08995 () | 1869327..1869770 | + | 444 | WP_040090634.1 | hypothetical protein | - |
| FIP50_RS09000 () | 1869767..1871245 | + | 1479 | WP_151140375.1 | PBSX family phage terminase large subunit | - |
| FIP50_RS09005 () | 1871247..1873445 | + | 2199 | WP_085455940.1 | portal protein | - |
| FIP50_RS09010 () | 1873536..1874429 | + | 894 | WP_151140376.1 | scaffolding protein | - |
| FIP50_RS09015 () | 1874448..1875701 | + | 1254 | WP_063119632.1 | coat protein | - |
| FIP50_RS09020 () | 1875743..1875931 | + | 189 | WP_001389518.1 | hypothetical protein | - |
| FIP50_RS09025 () | 1875912..1876373 | + | 462 | WP_151140377.1 | head DNA stabilization protein | - |
| FIP50_RS09030 () | 1876383..1877801 | + | 1419 | WP_151140378.1 | packaged DNA stabilization protein gp10 | - |
| FIP50_RS09035 () | 1877801..1878649 | + | 849 | WP_142436681.1 | hypothetical protein | - |
| FIP50_RS09040 () | 1878649..1879104 | + | 456 | WP_151140379.1 | DUF2824 family protein | - |
| FIP50_RS09045 () | 1879107..1879799 | + | 693 | WP_137455329.1 | DNA transfer protein | - |
| FIP50_RS09050 () | 1879809..1881215 | + | 1407 | WP_069936398.1 | phage DNA ejection protein | - |
| FIP50_RS09055 () | 1881215..1883056 | + | 1842 | WP_151140380.1 | DNA transfer protein | - |
| FIP50_RS09060 () | 1883188..1883670 | + | 483 | Protein_1769 | phage tail protein | - |
| FIP50_RS09065 () | 1885285..1886316 | + | 1032 | WP_104726698.1 | acyltransferase | - |
| FIP50_RS09070 () | 1886420..1886809 | + | 390 | WP_151140381.1 | LexA family transcriptional regulator | - |
| FIP50_RS09075 () | 1887153..1888319 | + | 1167 | WP_016247321.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| FIP50_RS09080 () | 1888438..1888911 | + | 474 | WP_001105415.1 | DNA gyrase inhibitor SbmC | - |
| FIP50_RS09085 () | 1889109..1890167 | + | 1059 | WP_064670363.1 | FUSC family protein | - |
| FIP50_RS09090 () | 1890339..1890668 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| FIP50_RS09095 () | 1890769..1890951 | - | 183 | WP_001016348.1 | hypothetical protein | - |
| FIP50_RS09100 () | 1891023..1891151 | + | 129 | Protein_1777 | transposase domain-containing protein | - |
| FIP50_RS09105 () | 1891440..1891553 | - | 114 | WP_001161660.1 | DUF957 domain-containing protein | - |
| FIP50_RS09110 () | 1891566..1891760 | - | 195 | WP_000988600.1 | hypothetical protein | - |
| FIP50_RS09115 () | 1891757..1892131 | - | 375 | WP_000854814.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| FIP50_RS09120 () | 1892220..1892588 | - | 369 | WP_001285585.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| FIP50_RS09125 () | 1892662..1892883 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| FIP50_RS09130 () | 1892946..1893422 | - | 477 | WP_001186773.1 | RadC family protein | - |
| FIP50_RS09135 () | 1893438..1893917 | - | 480 | WP_000860076.1 | antirestriction protein | - |
| FIP50_RS09140 () | 1893999..1894820 | - | 822 | WP_064670364.1 | DUF945 domain-containing protein | - |
| FIP50_RS09145 () | 1895041..1895451 | - | 411 | WP_000846713.1 | hypothetical protein | - |
| FIP50_RS09150 () | 1895467..1896150 | - | 684 | WP_000775500.1 | hypothetical protein | - |
| FIP50_RS09155 () | 1896286..1897356 | - | 1071 | WP_000102643.1 | patatin-like phospholipase family protein | - |
| FIP50_RS09160 () | 1897353..1897964 | - | 612 | Protein_1789 | chemotaxis protein | - |
| FIP50_RS09165 () | 1898013..1898414 | + | 402 | WP_000270974.1 | hypothetical protein | - |
| FIP50_RS09170 () | 1898402..1898812 | + | 411 | WP_001221617.1 | zinc-ribbon domain-containing protein | - |
| FIP50_RS09175 () | 1899096..1900715 | + | 1620 | Protein_1792 | ISL3 family transposase ISEc38 | Transposase |
| FIP50_RS09180 () | 1900795..1901087 | + | 293 | Protein_1793 | gamma-glutamyltransferase | - |
| FIP50_RS09185 () | 1901127..1902161 | - | 1035 | WP_000656352.1 | phosphotriesterase | - |
| FIP50_RS09190 () | 1902164..1903129 | - | 966 | Protein_1795 | DMT family transporter | - |
| FIP50_RS09195 () | 1903186..1903944 | - | 759 | WP_001066368.1 | hypothetical protein | - |
| FIP50_RS09200 () | 1903958..1904905 | - | 948 | WP_016244794.1 | ribokinase | - |
| FIP50_RS09205 () | 1904918..1905171 | - | 254 | Protein_1798 | DeoR/GlpR transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|