MGE detailed information
MGE type: Genomic_island MGE length: 22404 bp
Accession: NZ_CP049606 Location: 2417169..2439572 Organism: Shigella boydii strain 600080 Replicon: chromosome
Accession: NZ_CP049606 Location: 2417169..2439572 Organism: Shigella boydii strain 600080 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S61_RS12200 () | 2412410..2413393 | - | 984 | WP_000387377.1 | zinc transporter ZntB | - |
| G5S61_RS23670 () | 2413407..2413454 | - | 48 | WP_211180494.1 | protein YnaN | - |
| G5S61_RS12205 () | 2413648..2414880 | + | 1233 | Protein_2417 | diguanylate cyclase DgcM | - |
| G5S61_RS12210 () | 2414901..2415464 | - | 564 | WP_039066156.1 | DNA endonuclease SmrA | - |
| G5S61_RS12215 () | 2415718..2417172 | - | 1455 | WP_011069405.1 | DHA2 family efflux MFS transporter permease subunit | - |
| G5S61_RS12220 () | 2417169..2417564 | - | 396 | Protein_2420 | HlyD family secretion protein | - |
| G5S61_RS12225 () | 2417677..2417865 | + | 189 | WP_039066092.1 | hypothetical protein | - |
| G5S61_RS12230 () | 2417875..2419074 | + | 1200 | WP_000947175.1 | IS91 family transposase | - |
| G5S61_RS12235 () | 2419247..2419885 | - | 639 | Protein_2423 | biotin/lipoyl-binding protein | - |
| G5S61_RS12240 () | 2419982..2420797 | + | 816 | WP_000156575.1 | helix-turn-helix transcriptional regulator | - |
| G5S61_RS23675 () | 2420971..2421187 | - | 217 | Protein_2425 | LysR family transcriptional regulator | - |
| G5S61_RS12245 () | 2421187..2421330 | + | 144 | Protein_2426 | AbgT family transporter | - |
| G5S61_RS12250 () | 2421341..2421856 | + | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| G5S61_RS12255 () | 2422051..2422803 | + | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| G5S61_RS12260 () | 2422955..2423905 | + | 951 | WP_001262123.1 | universal stress protein UspE | - |
| G5S61_RS12265 () | 2423955..2424212 | - | 258 | Protein_2430 | DUF2534 family protein | - |
| G5S61_RS12270 () | 2424412..2425224 | - | 813 | Protein_2431 | IS3-like element IS911 family transposase | - |
| G5S61_RS12275 () | 2425309..2425674 | + | 366 | WP_000124119.1 | hypothetical protein | - |
| G5S61_RS12280 () | 2425674..2426861 | + | 1188 | WP_000937573.1 | IS91 family transposase | - |
| G5S61_RS12285 () | 2427045..2427409 | - | 365 | Protein_2434 | transposase | - |
| G5S61_RS12290 () | 2427537..2428568 | + | 1032 | WP_000559908.1 | low conductance mechanosensitive channel YnaI | - |
| G5S61_RS12295 () | 2428619..2430232 | - | 1614 | WP_000683016.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| G5S61_RS12300 () | 2430569..2431036 | - | 468 | Protein_2437 | DNA-binding transcriptional regulator PgrR | - |
| G5S61_RS12305 () | 2431100..2431410 | + | 311 | Protein_2438 | transposase | - |
| G5S61_RS12310 () | 2431453..2432662 | - | 1210 | Protein_2439 | IS3 family transposase | - |
| G5S61_RS12315 () | 2432717..2433565 | + | 849 | Protein_2440 | IS3-like element IS600 family transposase | - |
| G5S61_RS12320 () | 2433606..2434535 | + | 930 | Protein_2441 | exodeoxyribonuclease VIII | - |
| G5S61_RS12325 () | 2434513..2434785 | + | 273 | WP_001277358.1 | host-nuclease inhibitor Gam family protein | - |
| G5S61_RS12330 () | 2434815..2435912 | + | 1098 | WP_039066158.1 | AAA family ATPase | - |
| G5S61_RS12335 () | 2435963..2436151 | + | 189 | WP_000276807.1 | DUF1187 family protein | - |
| - () | 2435969..2436147 | - | 179 | NuclAT_0 | - | - |
| - () | 2435969..2436147 | - | 179 | NuclAT_0 | - | - |
| - () | 2435969..2436147 | - | 179 | NuclAT_0 | - | - |
| - () | 2435969..2436147 | - | 179 | NuclAT_0 | - | - |
| G5S61_RS12340 () | 2436252..2437408 | + | 1157 | WP_178986836.1 | IS3-like element IS600 family transposase | - |
| G5S61_RS12345 () | 2437525..2437806 | + | 282 | WP_005127484.1 | excisionase | - |
| G5S61_RS12350 () | 2437772..2438848 | + | 1077 | WP_001189100.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| - | 2438969..2439203 | + | 235 | - | - | Antitoxin Detail |
| - | 2438970..2439073 | - | 104 | - | - | Toxin Detail |
| G5S61_RS12355 () | 2439231..2439572 | - | 342 | WP_073705566.1 | YebY family protein | - |
| G5S61_RS12360 () | 2439585..2440457 | - | 873 | WP_039066159.1 | copper homeostasis membrane protein CopD | - |
| G5S61_RS12365 () | 2440461..2440835 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| G5S61_RS12370 () | 2440974..2441204 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G5S61_RS12375 () | 2441306..2441962 | + | 657 | Protein_2452 | carbon-nitrogen hydrolase family protein | - |
| G5S61_RS12380 () | 2441986..2442648 | + | 663 | WP_000944270.1 | exodeoxyribonuclease X | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|