MGE detailed information
MGE type: IScluster/Tn MGE length: 28973 bp
Accession: NZ_CP049279 Location: 186448..215420 Organism: Shigella boydii strain 600690 Replicon: plasmid p600690_216
Accession: NZ_CP049279 Location: 186448..215420 Organism: Shigella boydii strain 600690 Replicon: plasmid p600690_216
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S56_RS24690 (G5S56_24690) | 181787..182629 | - | 843 | WP_078167411.1 | polysaccharide deacetylase family protein | - |
| G5S56_RS24700 (G5S56_24700) | 183112..186024 | + | 2913 | WP_171700991.1 | ankyrin repeat domain-containing protein | - |
| G5S56_RS24705 (G5S56_24705) | 186054..186378 | - | 325 | Protein_222 | IS3 family transposase | - |
| G5S56_RS24710 (G5S56_24710) | 186376..186567 | + | 192 | Protein_223 | IS66 family transposase ISCro1 | Transposase |
| G5S56_RS24715 (G5S56_24715) | 186581..187927 | - | 1347 | Protein_224 | IS4 family transposase IS4 | Transposase |
| G5S56_RS24720 (G5S56_24720) | 187990..188256 | - | 267 | Protein_225 | IS66 family transposase ISCro1 | Transposase |
| G5S56_RS24725 (G5S56_24725) | 188613..189203 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| G5S56_RS24730 (G5S56_24730) | 189286..189455 | - | 170 | Protein_227 | type II toxin-antitoxin system toxin YacB | - |
| G5S56_RS24735 (G5S56_24735) | 189455..189724 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| G5S56_RS24740 (G5S56_24740) | 189932..191569 | - | 1638 | WP_000936808.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| G5S56_RS24745 (G5S56_24745) | 191831..191938 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| G5S56_RS24750 (G5S56_24750) | 191962..192267 | - | 306 | WP_078167349.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| G5S56_RS24755 (G5S56_24755) | 192269..192487 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| G5S56_RS24760 (G5S56_24760) | 193023..194114 | - | 1092 | Protein_233 | IS66 family transposase ISEc49 | Transposase |
| G5S56_RS24765 (G5S56_24765) | 194122..194690 | + | 569 | Protein_234 | plasmid segregation protein ParM | - |
| G5S56_RS25570 | 194693..194884 | + | 192 | WP_284522470.1 | plasmid partitioning/stability family protein | - |
| G5S56_RS24775 (G5S56_24775) | 195152..195289 | + | 138 | WP_171700985.1 | hypothetical protein | - |
| G5S56_RS24780 (G5S56_24780) | 195421..195696 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G5S56_RS24785 (G5S56_24785) | 195696..195980 | - | 285 | WP_001178088.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| G5S56_RS24790 (G5S56_24790) | 196432..196683 | + | 252 | WP_000433928.1 | transporter | - |
| G5S56_RS24795 (G5S56_24795) | 196733..196942 | + | 210 | Protein_240 | peptidoglycan-binding protein | - |
| G5S56_RS24800 (G5S56_24800) | 197042..197227 | - | 186 | Protein_241 | IS21 family transposase IS100 | Transposase |
| G5S56_RS24805 (G5S56_24805) | 197563..198033 | + | 471 | Protein_242 | IS1 family transposase IS1N | Transposase |
| G5S56_RS24810 (G5S56_24810) | 198192..198830 | + | 639 | WP_000607008.1 | hypothetical protein | VF |
| G5S56_RS24815 (G5S56_24815) | 198945..199214 | + | 270 | Protein_244 | IS3 family transposase ISEc48 | Transposase |
| G5S56_RS24820 (G5S56_24820) | 199302..199598 | + | 297 | Protein_245 | IS3 family transposase IS2 | Transposase |
| G5S56_RS24825 (G5S56_24825) | 199613..200959 | - | 1347 | WP_000483770.1 | IS4 family transposase IS4 | Transposase |
| G5S56_RS24830 (G5S56_24830) | 201026..201969 | + | 944 | Protein_247 | IS3 family transposase IS2 | Transposase |
| G5S56_RS24835 (G5S56_24835) | 202217..202333 | + | 117 | Protein_248 | IS110 family transposase | - |
| G5S56_RS24840 (G5S56_24840) | 202396..203552 | + | 1157 | WP_128875272.1 | IS3 family transposase ISSd1 | Transposase |
| G5S56_RS24845 (G5S56_24845) | 203597..204124 | - | 528 | Protein_250 | DUF1281 domain-containing protein | - |
| G5S56_RS24850 (G5S56_24850) | 204540..205499 | + | 960 | WP_000921952.1 | plasmid segregation protein ParM | - |
| G5S56_RS24855 (G5S56_24855) | 205499..205894 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| G5S56_RS24860 (G5S56_24860) | 206077..206457 | + | 381 | WP_005015412.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| G5S56_RS24865 (G5S56_24865) | 206503..207347 | + | 845 | WP_178966748.1 | IS5 family transposase ISSfl7 | Transposase |
| G5S56_RS25575 | 207358..207468 | + | 111 | Protein_255 | hypothetical protein | - |
| G5S56_RS24870 (G5S56_24870) | 207474..208223 | - | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| G5S56_RS24875 (G5S56_24875) | 208595..209751 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| G5S56_RS24880 (G5S56_24880) | 209855..211101 | + | 1247 | Protein_258 | group II intron reverse transcriptase/maturase | - |
| G5S56_RS24885 (G5S56_24885) | 211410..211712 | + | 303 | WP_225620366.1 | group II intron maturase-specific domain-containing protein | - |
| G5S56_RS24890 (G5S56_24890) | 211786..211905 | + | 120 | Protein_260 | transposase domain-containing protein | - |
| G5S56_RS24895 (G5S56_24895) | 212038..212208 | + | 171 | Protein_261 | transposase | - |
| G5S56_RS24900 (G5S56_24900) | 212219..213871 | - | 1653 | WP_078167405.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| G5S56_RS24905 (G5S56_24905) | 214212..215420 | - | 1209 | Protein_263 | IS3 family transposase | - |
| G5S56_RS24910 (G5S56_24910) | 215593..215911 | - | 319 | Protein_264 | fimbria/pilus outer membrane usher protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|