MGE detailed information
MGE type: IScluster/Tn MGE length: 10544 bp
Accession: NZ_CP049278 Location: 1094246..1104789 Organism: Shigella boydii strain 600690 Replicon: chromosome
Accession: NZ_CP049278 Location: 1094246..1104789 Organism: Shigella boydii strain 600690 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S56_RS05155 (1089365) | 1089365..1090090 | + | 726 | WP_000246882.1 | 30S ribosomal protein S2 | - |
| G5S56_RS05160 (1090348) | 1090348..1091199 | + | 852 | WP_000818114.1 | translation elongation factor Ts | - |
| G5S56_RS05165 (1091346) | 1091346..1092071 | + | 726 | WP_000224573.1 | UMP kinase | - |
| G5S56_RS05170 (1092363) | 1092363..1092920 | + | 558 | WP_000622418.1 | ribosome recycling factor | - |
| G5S56_RS05175 (1093012) | 1093012..1094208 | + | 1197 | WP_000811951.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| G5S56_RS05180 (1094246) | 1094246..1095592 | - | 1347 | WP_178966589.1 | IS4-like element IS4 family transposase | - |
| G5S56_RS05185 (1095797) | 1095797..1096471 | + | 675 | WP_178966591.1 | IS66-like element accessory protein TnpA | - |
| G5S56_RS05190 (1096468) | 1096468..1096815 | + | 348 | WP_000631709.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| G5S56_RS05195 (1096835) | 1096835..1097479 | + | 645 | Protein_1014 | IS66-like element ISSfl3 family transposase | - |
| G5S56_RS05205 (1098822) | 1098822..1098956 | + | 135 | Protein_1016 | transposase | - |
| G5S56_RS05210 (1099026) | 1099026..1100559 | + | 1534 | WP_119181915.1 | IS3 family transposase | - |
| G5S56_RS05215 (1101011) | 1101011..1101133 | - | 123 | WP_223200913.1 | Hok/Gef family protein | Toxin Detail |
| G5S56_RS25055 (1101078) | 1101078..1101230 | - | 153 | Protein_1019 | DUF5431 family protein | - |
| - (1101218) | 1101218..1101424 | - | 207 | NuclAT_4 | - | Antitoxin Detail |
| - (1101218) | 1101218..1101424 | - | 207 | NuclAT_4 | - | Antitoxin Detail |
| - (1101218) | 1101218..1101424 | - | 207 | NuclAT_4 | - | Antitoxin Detail |
| - (1101218) | 1101218..1101424 | - | 207 | NuclAT_4 | - | Antitoxin Detail |
| G5S56_RS25060 (1101610) | 1101610..1101708 | - | 99 | Protein_1020 | IS66 family insertion sequence element accessory protein TnpB | - |
| G5S56_RS05220 (1101692) | 1101692..1102633 | - | 942 | Protein_1021 | IS66 family transposase | - |
| G5S56_RS05225 (1102653) | 1102653..1102999 | - | 347 | Protein_1022 | IS66 family insertion sequence element accessory protein TnpB | - |
| G5S56_RS05230 (1102999) | 1102999..1103376 | - | 378 | Protein_1023 | IS66-like element accessory protein TnpA | - |
| G5S56_RS05235 (1103443) | 1103443..1104789 | + | 1347 | WP_178966593.1 | IS4-like element IS4 family transposase | - |
| G5S56_RS05240 (1104980) | 1104980..1105738 | + | 759 | WP_001295562.1 | (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | - |
| G5S56_RS05245 (1105751) | 1105751..1106608 | + | 858 | WP_000922456.1 | phosphatidate cytidylyltransferase | - |
| G5S56_RS05250 (1106620) | 1106620..1107972 | + | 1353 | WP_004973152.1 | sigma E protease regulator RseP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|