MGE detailed information
MGE type: Prophage MGE length: 32689 bp
Accession: NZ_CP049171 Location: 3807511..3840199 Organism: Shigella sonnei strain 0401930105 Replicon: chromosome
Accession: NZ_CP049171 Location: 3807511..3840199 Organism: Shigella sonnei strain 0401930105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O59_RS18955 () | 3803594..3804235 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G6O59_RS18960 () | 3804291..3805469 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G6O59_RS18965 () | 3805603..3805893 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| G6O59_RS18970 () | 3805960..3806316 | + | 357 | WP_001295500.1 | protein YebF | - |
| G6O59_RS18975 () | 3806643..3807302 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| G6O59_RS18980 () | 3807511..3809571 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| G6O59_RS18985 () | 3809568..3810230 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| G6O59_RS18990 () | 3810254..3810910 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| G6O59_RS18995 () | 3811012..3811242 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G6O59_RS19000 () | 3811381..3811755 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| G6O59_RS19005 () | 3811759..3812631 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| G6O59_RS19010 () | 3812644..3812985 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 3813013..3813247 | - | 235 | - | - | Antitoxin Detail |
| - | 3813143..3813246 | + | 104 | - | - | Toxin Detail |
| G6O59_RS19015 () | 3813368..3814444 | - | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| G6O59_RS19020 () | 3814481..3814726 | - | 246 | Protein_3693 | IS1 family transposase IS1R | Transposase |
| G6O59_RS19030 () | 3816060..3816514 | - | 455 | Protein_3695 | IS1-like element IS1A family transposase | - |
| G6O59_RS19035 () | 3816543..3816803 | - | 261 | WP_077447296.1 | excisionase | - |
| G6O59_RS19040 () | 3816948..3818104 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| G6O59_RS19045 () | 3818220..3819936 | - | 1717 | Protein_3698 | E3 ubiquitin-protein ligase ipaH3 | VF |
| G6O59_RS19055 () | 3821945..3822118 | + | 174 | Protein_3700 | metallophosphoesterase | - |
| G6O59_RS19065 () | 3822884..3823189 | + | 306 | Protein_3702 | serine/threonine-protein phosphatase | - |
| G6O59_RS19070 () | 3823247..3824403 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| G6O59_RS19075 () | 3824445..3824645 | + | 201 | Protein_3704 | serine/threonine-protein phosphatase | - |
| G6O59_RS19080 () | 3824646..3824837 | - | 192 | WP_001296140.1 | YebW family protein | - |
| G6O59_RS19085 () | 3824942..3825100 | - | 159 | Protein_3706 | YebV family protein | - |
| G6O59_RS19090 () | 3825158..3825855 | + | 698 | WP_237158197.1 | IS1-like element IS1A family transposase | - |
| G6O59_RS19095 () | 3825872..3825955 | - | 84 | Protein_3708 | DUF1480 family protein | - |
| G6O59_RS19100 () | 3826073..3827512 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G6O59_RS19105 () | 3827593..3830226 | - | 2634 | WP_005138565.1 | hypothetical protein | VF |
| G6O59_RS19110 () | 3830195..3831478 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| G6O59_RS19115 () | 3831608..3832105 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| G6O59_RS19120 () | 3832202..3832900 | + | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| G6O59_RS19125 () | 3832920..3834968 | + | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| G6O59_RS19130 () | 3835160..3836041 | + | 882 | WP_000984517.1 | protease HtpX | - |
| G6O59_RS19135 () | 3836087..3837150 | - | 1064 | Protein_3716 | MFS transporter | - |
| G6O59_RS19140 () | 3837327..3838118 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| G6O59_RS19145 () | 3838261..3838500 | - | 240 | WP_001211011.1 | YobH family protein | - |
| G6O59_RS19150 () | 3838659..3838802 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| G6O59_RS19155 () | 3838877..3839164 | + | 288 | WP_001006860.1 | YebO family protein | - |
| G6O59_RS19160 () | 3839834..3839977 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| G6O59_RS19165 () | 3839990..3840199 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| G6O59_RS19170 () | 3840365..3841174 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| G6O59_RS19175 () | 3841171..3841737 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| G6O59_RS19180 () | 3842166..3842624 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| G6O59_RS19185 () | 3842679..3843530 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| G6O59_RS19190 () | 3843543..3844343 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|