MGE detailed information
MGE type: Conjugative plasmid MGE length: 143163 bp
Accession: NZ_CP049082 Location: 1..143163 Organism: Escherichia coli strain p10A Replicon: plasmid p10A_p1
Accession: NZ_CP049082 Location: 1..143163 Organism: Escherichia coli strain p10A Replicon: plasmid p10A_p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6P90_RS23075 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| G6P90_RS23080 () | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| G6P90_RS23085 () | 2124..2312 | - | 189 | WP_001312821.1 | hypothetical protein | - |
| G6P90_RS23090 () | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| G6P90_RS23095 () | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| G6P90_RS23100 () | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| G6P90_RS23105 () | 6256..6645 | + | 390 | WP_001332050.1 | IS110 family transposase ISEc20 | Transposase |
| G6P90_RS23110 () | 7425..7583 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| G6P90_RS23115 () | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| G6P90_RS23120 () | 9128..9396 | - | 269 | Protein_9 | IS3 family transposase ISLad1 | Transposase |
| G6P90_RS23125 () | 9453..10150 | + | 698 | Protein_10 | IS1 family transposase IS1R | Transposase |
| G6P90_RS23130 () | 10161..10364 | - | 204 | WP_001259759.1 | colicin V family bacteriocin | - |
| G6P90_RS23135 () | 10342..10578 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| G6P90_RS23140 () | 11042..11323 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| G6P90_RS23145 () | 11496..11663 | + | 168 | Protein_14 | colicin-B | - |
| G6P90_RS23150 () | 11681..12208 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| G6P90_RS23155 () | 12452..13267 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| G6P90_RS23160 () | 13317..13670 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| G6P90_RS23165 () | 13848..14639 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| G6P90_RS23170 () | 14636..15325 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| G6P90_RS23175 () | 15369..15719 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| G6P90_RS23180 () | 16273..17361 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| G6P90_RS23185 () | 17363..19588 | + | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| G6P90_RS23190 () | 19638..20537 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| G6P90_RS23195 () | 20527..20817 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| G6P90_RS23200 () | 21113..21343 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| G6P90_RS23205 () | 21340..21756 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| G6P90_RS23210 () | 21918..24056 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| G6P90_RS23215 () | 24581..25843 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| G6P90_RS23220 () | 26099..26974 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| G6P90_RS23225 () | 27021..27353 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| G6P90_RS23230 () | 27531..28610 | - | 1080 | WP_001089727.1 | permease | - |
| G6P90_RS23235 () | 28715..29038 | + | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| G6P90_RS23240 () | 29139..29519 | + | 381 | Protein_33 | NAD(P)H-dependent oxidoreductase | - |
| G6P90_RS23245 () | 29572..30276 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G6P90_RS23250 () | 30342..31856 | + | 1515 | Protein_35 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| G6P90_RS23255 () | 31914..32156 | + | 243 | WP_000844627.1 | transposase | - |
| G6P90_RS23260 () | 32188..32838 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| G6P90_RS23265 () | 32944..34143 | + | 1200 | WP_077248803.1 | Tetracycline resistance protein, class C | ARG |
| G6P90_RS23270 () | 34175..35059 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| G6P90_RS23275 () | 35197..35604 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| G6P90_RS23280 () | 35596..37269 | + | 1674 | Protein_41 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| G6P90_RS23285 () | 37224..37928 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G6P90_RS23290 () | 37994..38278 | + | 285 | Protein_43 | IS6 family transposase IS26 | Transposase |
| G6P90_RS23295 () | 38468..39283 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| G6P90_RS23300 () | 39434..40138 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G6P90_RS23305 () | 40245..40949 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G6P90_RS23310 () | 41022..41261 | + | 240 | WP_011264039.1 | macrolide transporter | - |
| G6P90_RS23315 () | 41407..42270 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| G6P90_RS23320 () | 42308..42553 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| G6P90_RS23325 () | 43022..43813 | + | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| G6P90_RS23330 () | 43816..44091 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| G6P90_RS23335 () | 44093..44728 | + | 636 | Protein_52 | IS256 family transposase IS406 | Transposase |
| G6P90_RS23340 () | 44993..45325 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| G6P90_RS23345 () | 45495..46286 | - | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| G6P90_RS23350 () | 46375..47217 | - | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| G6P90_RS23355 () | 47418..47651 | - | 234 | WP_072042932.1 | hypothetical protein | - |
| G6P90_RS23360 () | 47682..49175 | - | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| G6P90_RS23365 () | 49287..49592 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| G6P90_RS23370 () | 49620..50834 | - | 1215 | WP_000214122.1 | Bicyclomycin resistance protein | ARG |
| G6P90_RS23375 () | 51051..51935 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| G6P90_RS23380 () | 51966..52472 | - | 507 | Protein_61 | IS91 family transposase ISVsa3 | Transposase |
| G6P90_RS23385 () | 52537..53241 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G6P90_RS23390 () | 53294..55600 | + | 2307 | Protein_63 | Tn3 family transposase TnpA_Tn3 | Transposase |
| G6P90_RS23395 () | 55665..56369 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| G6P90_RS23400 () | 56423..57471 | - | 1049 | Protein_65 | IS3 family transposase ISKpn11 | Transposase |
| G6P90_RS23405 () | 57563..58105 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
| G6P90_RS23410 () | 58118..58978 | - | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| G6P90_RS23415 () | 59085..59789 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| G6P90_RS23420 () | 59855..60400 | + | 546 | Protein_69 | Tn3 family transposase TnpA_Tn3 | Transposase |
| G6P90_RS23425 () | 60436..60851 | - | 416 | Protein_70 | IS1 family transposase | - |
| G6P90_RS23430 () | 61100..61501 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| G6P90_RS23435 () | 61434..61691 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| G6P90_RS23440 () | 61784..62437 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| G6P90_RS23445 () | 63376..64233 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| G6P90_RS23450 () | 64226..64708 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| G6P90_RS23455 () | 64701..64775 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| G6P90_RS23460 () | 65007..65264 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| G6P90_RS23465 () | 65548..65754 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 65741..65802 | + | 62 | NuclAT_1 | - | - |
| - () | 65741..65802 | + | 62 | NuclAT_1 | - | - |
| - () | 65741..65802 | + | 62 | NuclAT_1 | - | - |
| - () | 65741..65802 | + | 62 | NuclAT_1 | - | - |
| G6P90_RS24015 () | 66058..66132 | - | 75 | Protein_79 | endonuclease | - |
| G6P90_RS23470 () | 66378..66590 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| G6P90_RS23475 () | 66726..67286 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| G6P90_RS23480 () | 67389..68249 | - | 861 | WP_000704513.1 | putative protein YcjY | VF |
| G6P90_RS23485 () | 68308..69054 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| G6P90_RS23490 () | 69074..74344 | - | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| G6P90_RS23495 () | 74426..74653 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| G6P90_RS23500 () | 74653..75051 | + | 399 | WP_000911313.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| G6P90_RS23505 () | 75060..77213 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| G6P90_RS23510 () | 77466..78197 | - | 732 | WP_023565183.1 | complement resistance protein TraT | - |
| G6P90_RS23515 () | 78229..78726 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| G6P90_RS23520 () | 78742..81564 | - | 2823 | WP_001007018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| G6P90_RS23525 () | 81561..82934 | - | 1374 | WP_001517790.1 | conjugal transfer protein TraH | - |
| G6P90_RS23530 () | 82934..83347 | - | 414 | WP_001324104.1 | F-type conjugal transfer protein TrbF | - |
| G6P90_RS23535 () | 83301..83642 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| G6P90_RS23540 () | 83572..84117 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| G6P90_RS23545 () | 84104..84388 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| G6P90_RS23550 () | 84469..84783 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| G6P90_RS23555 () | 84785..85132 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| G6P90_RS23560 () | 85148..85891 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| G6P90_RS23565 () | 85884..86141 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| G6P90_RS23570 () | 86168..87976 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| G6P90_RS23575 () | 87973..88611 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| G6P90_RS23580 () | 88620..89612 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| G6P90_RS23585 () | 89609..90241 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| G6P90_RS23590 () | 90238..90624 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| G6P90_RS23595 () | 90621..93248 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| G6P90_RS23600 () | 93408..93629 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| G6P90_RS23605 () | 93764..94279 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| G6P90_RS23610 () | 94276..94527 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| G6P90_RS23615 () | 94539..94769 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| G6P90_RS23620 () | 94723..95313 | - | 591 | WP_001376242.1 | conjugal transfer protein TraP | - |
| G6P90_RS23625 () | 95303..96730 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| G6P90_RS23630 () | 96730..97434 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| G6P90_RS23635 () | 97445..98011 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| G6P90_RS23640 () | 98033..98344 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| G6P90_RS23645 () | 98359..98724 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| G6P90_RS23650 () | 98757..99152 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| G6P90_RS23655 () | 99251..99940 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| G6P90_RS23660 () | 100127..100510 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| G6P90_RS23665 () | 100831..101433 | + | 603 | WP_072156291.1 | hypothetical protein | VF |
| G6P90_RS23670 () | 101730..102551 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| G6P90_RS23675 () | 102670..102957 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| G6P90_RS23680 () | 103208..104212 | + | 1005 | WP_024257664.1 | IS110 family transposase IS1663 | Transposase |
| G6P90_RS23685 () | 104375..104566 | - | 192 | Protein_123 | single-stranded DNA-binding protein | - |
| G6P90_RS23690 () | 105271..105429 | - | 159 | WP_012817833.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 105481..105629 | - | 149 | NuclAT_0 | - | - |
| - () | 105481..105629 | - | 149 | NuclAT_0 | - | - |
| - () | 105481..105629 | - | 149 | NuclAT_0 | - | - |
| - () | 105481..105629 | - | 149 | NuclAT_0 | - | - |
| G6P90_RS23695 () | 105605..105880 | - | 276 | WP_077631319.1 | hypothetical protein | - |
| G6P90_RS23700 () | 105944..107515 | - | 1572 | WP_099588291.1 | IS66 family transposase ISCro1 | Transposase |
| G6P90_RS23705 () | 107535..107882 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| G6P90_RS23710 () | 107882..108529 | - | 648 | WP_001295212.1 | IS66 family transposase ISCro1 | Transposase |
| G6P90_RS23715 () | 108590..109366 | + | 777 | WP_099588290.1 | thiosulfate reductase cytochrome B subunit | - |
| G6P90_RS23720 () | 109612..111006 | - | 1395 | WP_165696052.1 | carbohydrate porin | - |
| G6P90_RS23725 () | 111200..112633 | - | 1434 | WP_024170639.1 | glycoside hydrolase family 32 protein | - |
| G6P90_RS23730 () | 112630..113907 | - | 1278 | WP_001083369.1 | MFS transporter | - |
| G6P90_RS23735 () | 113970..116096 | - | 2127 | WP_099588288.1 | alpha-galactosidase | - |
| G6P90_RS23740 () | 116192..117202 | - | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| G6P90_RS23745 () | 117360..118103 | - | 744 | WP_165696053.1 | site-specific integrase | - |
| G6P90_RS23750 () | 118209..119426 | + | 1218 | Protein_136 | IS3 family transposase IS2 | Transposase |
| G6P90_RS23755 () | 119411..119980 | + | 570 | WP_099588286.1 | hypothetical protein | - |
| G6P90_RS24020 () | 120448..120672 | - | 225 | WP_189658304.1 | single-stranded DNA-binding protein | - |
| G6P90_RS23770 () | 121811..122782 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| G6P90_RS23775 () | 122782..123948 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| G6P90_RS23780 () | 124248..124945 | - | 698 | Protein_141 | IS1 family transposase IS1S | Transposase |
| G6P90_RS23785 () | 125430..127631 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| G6P90_RS23790 () | 127713..128990 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| G6P90_RS23795 () | 128987..130729 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| G6P90_RS23800 () | 130729..131676 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| G6P90_RS23805 () | 131677..133401 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| G6P90_RS23810 () | 133537..134730 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| G6P90_RS23815 () | 135110..135490 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| G6P90_RS23820 () | 135831..136244 | - | 414 | Protein_149 | phosphopyruvate hydratase | - |
| G6P90_RS23830 () | 136733..137590 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| G6P90_RS23835 () | 137587..138444 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| G6P90_RS23840 () | 138441..139268 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| G6P90_RS23845 () | 139268..140182 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| G6P90_RS23850 () | 140538..141235 | + | 698 | Protein_154 | IS1 family transposase IS1S | Transposase |
| G6P90_RS23855 () | 141415..141928 | - | 514 | Protein_155 | DUF4113 domain-containing protein | - |
| G6P90_RS24025 () | 141989..142093 | - | 105 | Protein_156 | AAA family ATPase | - |
| G6P90_RS23860 () | 142095..142418 | - | 324 | Protein_157 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|