MGE detailed information
MGE type: Prophage MGE length: 111645 bp
Accession: NZ_CP049015 Location: 2792828..2904472 Organism: Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681 strain ATCC 8090 Replicon: chromosome
Accession: NZ_CP049015 Location: 2792828..2904472 Organism: Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681 strain ATCC 8090 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G4551_RS13375 () | 2788536..2788994 | + | 459 | WP_003021010.1 | DUF986 family protein | - |
| G4551_RS13380 () | 2789427..2789993 | + | 567 | WP_003021013.1 | manganese efflux pump MntP | - |
| G4551_RS13385 () | 2789990..2790799 | - | 810 | WP_003841628.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| G4551_RS13390 () | 2790863..2792608 | - | 1746 | WP_003841630.1 | peptidoglycan glycosyltransferase FtsI | - |
| G4551_RS13395 () | 2792828..2793037 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| G4551_RS13400 () | 2793190..2794170 | + | 981 | WP_000019441.1 | IS5 family transposase ISKpn26 | Transposase |
| G4551_RS13405 () | 2794966..2795250 | - | 285 | WP_003841991.1 | YebO family protein | - |
| G4551_RS13410 () | 2795325..2795468 | - | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| G4551_RS13415 () | 2795633..2795872 | + | 240 | WP_003841988.1 | hypothetical protein | - |
| G4551_RS13420 () | 2795987..2796778 | - | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| G4551_RS13425 () | 2796953..2798326 | + | 1374 | WP_003841986.1 | MFS transporter | - |
| G4551_RS13430 () | 2798373..2799254 | - | 882 | WP_003034964.1 | protease HtpX | - |
| G4551_RS13435 () | 2799447..2801495 | - | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| G4551_RS13440 () | 2801515..2802201 | - | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| G4551_RS13445 () | 2802298..2802795 | - | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| G4551_RS13450 () | 2802924..2804207 | + | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| G4551_RS13455 () | 2804176..2806809 | + | 2634 | WP_003034947.1 | hypothetical protein | VF |
| G4551_RS13460 () | 2806922..2808310 | + | 1389 | WP_003841980.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G4551_RS13465 () | 2808411..2808647 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| G4551_RS13470 () | 2808750..2808941 | + | 192 | WP_003841978.1 | YebW family protein | - |
| G4551_RS13475 () | 2808942..2809583 | - | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| G4551_RS13480 () | 2810276..2811835 | - | 1560 | WP_003841974.1 | hypothetical protein | VF |
| G4551_RS13485 () | 2812010..2812248 | + | 239 | Protein_2638 | DinI-like family protein | - |
| G4551_RS13490 () | 2812513..2813772 | - | 1260 | WP_003841970.1 | phage portal protein | - |
| G4551_RS13495 () | 2813772..2813951 | - | 180 | WP_003841969.1 | hypothetical protein | - |
| G4551_RS13500 () | 2813945..2815660 | - | 1716 | WP_003841968.1 | terminase large subunit | - |
| G4551_RS13505 () | 2815697..2816131 | - | 435 | WP_032941333.1 | P27 family phage terminase small subunit | - |
| G4551_RS13510 () | 2816359..2816874 | + | 516 | WP_003841965.1 | hypothetical protein | - |
| G4551_RS13515 () | 2817010..2817372 | - | 363 | WP_003841963.1 | HNH endonuclease | - |
| G4551_RS13520 () | 2817642..2817815 | - | 174 | WP_003841960.1 | addiction module toxin, GnsA/GnsB family | - |
| G4551_RS13525 () | 2818022..2818252 | - | 231 | WP_032941334.1 | hypothetical protein | - |
| G4551_RS13530 () | 2818326..2818514 | - | 189 | WP_072144007.1 | cold-shock protein | - |
| G4551_RS13535 () | 2818525..2818737 | - | 213 | WP_003841958.1 | cold shock protein CspG | - |
| G4551_RS13540 () | 2819112..2819657 | - | 546 | WP_050499177.1 | DUF2514 domain-containing protein | - |
| G4551_RS13545 () | 2819636..2820184 | - | 549 | WP_032941335.1 | lysozyme | - |
| G4551_RS13550 () | 2820156..2820434 | - | 279 | WP_003841952.1 | hypothetical protein | - |
| G4551_RS13555 () | 2820588..2820776 | - | 189 | WP_003841950.1 | hypothetical protein | - |
| G4551_RS13560 () | 2822206..2822421 | - | 216 | WP_003841948.1 | RNA chaperone/antiterminator CspA | - |
| G4551_RS13565 () | 2822718..2822930 | + | 213 | WP_003841946.1 | cold shock-like protein CspF | - |
| G4551_RS13570 () | 2823217..2823648 | - | 432 | WP_042270662.1 | antitermination protein | - |
| G4551_RS13575 () | 2823663..2824355 | - | 693 | WP_003841943.1 | DUF968 domain-containing protein | - |
| G4551_RS13580 () | 2824352..2824711 | - | 360 | WP_032941336.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G4551_RS13585 () | 2824714..2824920 | - | 207 | WP_003841940.1 | hypothetical protein | - |
| G4551_RS13590 () | 2824920..2825519 | - | 600 | WP_003841938.1 | DUF1367 family protein | - |
| G4551_RS13595 () | 2825554..2825802 | - | 249 | WP_071524344.1 | hypothetical protein | - |
| G4551_RS13600 () | 2825913..2826146 | - | 234 | WP_003841935.1 | DinI family protein | - |
| G4551_RS13605 () | 2826422..2826787 | - | 366 | WP_003841934.1 | hypothetical protein | - |
| G4551_RS13610 () | 2827380..2827598 | - | 219 | Protein_2663 | helix-turn-helix domain-containing protein | - |
| G4551_RS13615 () | 2827702..2828088 | + | 387 | WP_032941338.1 | helix-turn-helix domain-containing protein | - |
| G4551_RS13620 () | 2828239..2828712 | + | 474 | WP_003841927.1 | hypothetical protein | - |
| G4551_RS13625 () | 2828709..2829641 | + | 933 | WP_003841925.1 | hypothetical protein | - |
| G4551_RS13630 () | 2829674..2829880 | - | 207 | WP_032941339.1 | hypothetical protein | - |
| G4551_RS13635 () | 2830096..2830242 | - | 147 | WP_155267880.1 | hypothetical protein | - |
| G4551_RS13640 () | 2830241..2830447 | + | 207 | WP_003841921.1 | hypothetical protein | - |
| G4551_RS13645 () | 2830459..2830620 | + | 162 | WP_003841919.1 | hypothetical protein | - |
| G4551_RS13650 () | 2830707..2830994 | + | 288 | WP_003841917.1 | hypothetical protein | - |
| G4551_RS13655 () | 2831121..2831873 | + | 753 | WP_032941340.1 | hypothetical protein | - |
| G4551_RS13665 () | 2834134..2834727 | + | 594 | Protein_2674 | recombinase RecT | - |
| G4551_RS13670 () | 2834762..2835106 | + | 345 | WP_003841644.1 | hypothetical protein | - |
| G4551_RS13675 () | 2835099..2835302 | + | 204 | WP_003841645.1 | hypothetical protein | - |
| G4551_RS13680 () | 2835289..2835531 | + | 243 | WP_003841647.1 | DUF4060 family protein | - |
| G4551_RS13685 () | 2835596..2835868 | + | 273 | WP_003841650.1 | excisionase | - |
| G4551_RS13690 () | 2835837..2836922 | + | 1086 | WP_003841651.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2836998..2837138 | + | 141 | - | - | Antitoxin Detail |
| - () | 2837000..2837103 | - | 104 | - | - | Toxin Detail |
| G4551_RS13695 () | 2837259..2837597 | - | 339 | WP_003034934.1 | YebY family protein | - |
| G4551_RS13700 () | 2837618..2838490 | - | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| G4551_RS13705 () | 2838494..2838868 | - | 375 | WP_003841654.1 | CopC domain-containing protein YobA | - |
| G4551_RS13710 () | 2839012..2839242 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| G4551_RS13715 () | 2839349..2840005 | + | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| G4551_RS13720 () | 2840029..2840691 | + | 663 | WP_003841659.1 | exodeoxyribonuclease X | - |
| G4551_RS13725 () | 2840682..2842736 | - | 2055 | WP_003841660.1 | oligopeptidase B | - |
| G4551_RS13730 () | 2842823..2843482 | - | 660 | WP_003841661.1 | tellurite resistance TerB family protein | - |
| G4551_RS13735 () | 2843577..2843939 | - | 363 | WP_003841664.1 | protein YebF | - |
| G4551_RS13740 () | 2844061..2844351 | - | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| G4551_RS13745 () | 2844483..2845661 | + | 1179 | WP_003841666.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G4551_RS13750 () | 2845728..2846369 | - | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G4551_RS13755 () | 2846404..2848215 | - | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| G4551_RS13760 () | 2848449..2849924 | - | 1476 | WP_003841670.1 | glucose-6-phosphate dehydrogenase | - |
| G4551_RS13765 () | 2850292..2851161 | + | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| G4551_RS13770 () | 2851280..2852722 | + | 1443 | WP_003034890.1 | pyruvate kinase | - |
| G4551_RS13775 () | 2852765..2853736 | - | 972 | WP_003841672.1 | hypothetical protein | VF |
| G4551_RS13780 () | 2853856..2855175 | - | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| G4551_RS13785 () | 2855191..2856135 | - | 945 | WP_003841677.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| G4551_RS13790 () | 2856214..2856969 | + | 756 | WP_003034877.1 | hypothetical protein | VF |
| G4551_RS13795 () | 2856966..2857751 | + | 786 | WP_003034874.1 | hypothetical protein | VF |
| G4551_RS13800 () | 2857830..2858840 | - | 1011 | WP_003841680.1 | Holliday junction branch migration DNA helicase RuvB | - |
| G4551_RS13805 () | 2858849..2859460 | - | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| G4551_RS13810 () | 2859541..2860062 | - | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| G4551_RS13815 () | 2860097..2860840 | - | 744 | WP_003034865.1 | hypothetical protein | VF |
| G4551_RS13820 () | 2860869..2861312 | - | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| G4551_RS13825 () | 2861314..2863086 | - | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| G4551_RS13830 () | 2863353..2863919 | + | 567 | WP_003841685.1 | hydrolase | - |
| G4551_RS13835 () | 2864273..2864512 | + | 240 | WP_000497460.1 | DinI family protein | - |
| G4551_RS13840 () | 2864598..2865008 | - | 411 | WP_003841688.1 | hemerythrin domain-containing protein | - |
| G4551_RS13845 () | 2865200..2865532 | - | 333 | WP_003841689.1 | hypothetical protein | - |
| G4551_RS13850 () | 2865611..2865853 | + | 243 | WP_003841691.1 | DinI family protein | - |
| G4551_RS13855 () | 2865988..2867277 | - | 1290 | WP_003841693.1 | hypothetical protein | - |
| G4551_RS13860 () | 2867287..2868231 | - | 945 | WP_003841695.1 | hypothetical protein | - |
| G4551_RS13865 () | 2868233..2870944 | - | 2712 | WP_003841697.1 | DUF1983 domain-containing protein | - |
| G4551_RS13870 () | 2870944..2871342 | - | 399 | WP_003841698.1 | hypothetical protein | - |
| G4551_RS13875 () | 2871349..2871933 | - | 585 | WP_003841700.1 | hypothetical protein | - |
| G4551_RS13880 () | 2871933..2872526 | - | 594 | WP_003841701.1 | hypothetical protein | - |
| G4551_RS13885 () | 2872692..2872916 | + | 225 | WP_003841703.1 | hypothetical protein | - |
| G4551_RS13890 () | 2872905..2873264 | - | 360 | WP_003841705.1 | hypothetical protein | - |
| G4551_RS13895 () | 2873310..2875784 | - | 2475 | WP_003841707.1 | phage tail tape measure protein | - |
| G4551_RS13900 () | 2875843..2876220 | - | 378 | WP_003841708.1 | hypothetical protein | - |
| G4551_RS13905 () | 2876579..2876959 | - | 381 | WP_003841709.1 | phage tail assembly chaperone family protein, TAC | - |
| G4551_RS13910 () | 2877012..2877503 | - | 492 | WP_003841711.1 | hypothetical protein | - |
| G4551_RS13915 () | 2877563..2877928 | - | 366 | WP_003841715.1 | DUF3168 domain-containing protein | - |
| G4551_RS13920 () | 2877925..2878464 | - | 540 | WP_003841717.1 | HK97 gp10 family phage protein | - |
| G4551_RS13925 () | 2878457..2878789 | - | 333 | WP_003841719.1 | phage head closure protein | - |
| G4551_RS13930 () | 2878791..2879003 | - | 213 | WP_003841720.1 | hypothetical protein | - |
| G4551_RS13935 () | 2879073..2879390 | - | 318 | WP_003841722.1 | head-tail connector protein | - |
| G4551_RS13940 () | 2879468..2880706 | - | 1239 | WP_003841724.1 | phage major capsid protein | - |
| G4551_RS13945 () | 2880716..2881315 | - | 600 | WP_003841726.1 | HK97 family phage prohead protease | - |
| G4551_RS13950 () | 2881308..2882534 | - | 1227 | WP_003841728.1 | phage portal protein | - |
| G4551_RS13955 () | 2882524..2882673 | - | 150 | WP_162138603.1 | hypothetical protein | - |
| G4551_RS13960 () | 2882682..2884439 | - | 1758 | WP_003841731.1 | terminase large subunit | - |
| G4551_RS13965 () | 2884439..2884936 | - | 498 | WP_003841734.1 | phage terminase small subunit P27 family | - |
| G4551_RS13970 () | 2885093..2885443 | - | 351 | WP_003841739.1 | HNH endonuclease | - |
| G4551_RS13975 () | 2885431..2885646 | - | 216 | WP_155267876.1 | hypothetical protein | - |
| G4551_RS13980 () | 2885802..2886035 | - | 234 | WP_003841743.1 | hypothetical protein | - |
| G4551_RS13985 () | 2886399..2886602 | - | 204 | WP_003839237.1 | hypothetical protein | - |
| G4551_RS13990 () | 2887076..2887591 | - | 516 | WP_003839236.1 | DUF2514 domain-containing protein | - |
| G4551_RS13995 () | 2887588..2888136 | - | 549 | WP_008322460.1 | lysozyme | - |
| G4551_RS14000 () | 2888108..2888386 | - | 279 | WP_001568784.1 | holin | - |
| G4551_RS14005 () | 2888831..2889364 | - | 534 | WP_001446083.1 | hypothetical protein | - |
| G4551_RS14010 () | 2889480..2890166 | - | 687 | WP_003839229.1 | Rha family transcriptional regulator | - |
| G4551_RS14015 () | 2890436..2891125 | - | 690 | WP_003839227.1 | phage antiterminator protein | - |
| G4551_RS14020 () | 2891147..2892142 | - | 996 | WP_003839225.1 | DUF968 domain-containing protein | - |
| G4551_RS14025 () | 2892139..2892822 | - | 684 | WP_003839223.1 | phage regulatory protein/antirepressor Ant | - |
| G4551_RS14030 () | 2892836..2893222 | - | 387 | WP_003839221.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G4551_RS14035 () | 2893337..2894230 | - | 894 | WP_003839220.1 | phage N-6-adenine-methyltransferase | - |
| G4551_RS14040 () | 2894227..2895078 | - | 852 | WP_003839217.1 | conserved phage C-terminal domain-containing protein | - |
| G4551_RS14045 () | 2895068..2895247 | - | 180 | WP_003034732.1 | DUF4222 domain-containing protein | - |
| G4551_RS14050 () | 2895420..2895971 | - | 552 | WP_003839214.1 | hypothetical protein | - |
| G4551_RS14055 () | 2896000..2896242 | - | 243 | WP_003839211.1 | antirepressor protein Cro | - |
| G4551_RS14060 () | 2896342..2897052 | + | 711 | WP_003839209.1 | helix-turn-helix transcriptional regulator | - |
| G4551_RS14065 () | 2897128..2897334 | - | 207 | WP_003839207.1 | hypothetical protein | - |
| G4551_RS14070 () | 2897987..2898358 | + | 372 | WP_001515608.1 | hypothetical protein | - |
| G4551_RS14075 () | 2898415..2899242 | + | 828 | WP_003839202.1 | DUF2303 family protein | - |
| G4551_RS14080 () | 2899371..2899910 | + | 540 | WP_003839201.1 | hypothetical protein | - |
| G4551_RS14085 () | 2899898..2900074 | + | 177 | WP_001253786.1 | hypothetical protein | - |
| G4551_RS14090 () | 2900071..2900325 | + | 255 | WP_003839198.1 | hypothetical protein | - |
| G4551_RS14095 () | 2900322..2900813 | + | 492 | WP_003839196.1 | hypothetical protein | - |
| G4551_RS14100 () | 2900810..2901487 | + | 678 | WP_003839194.1 | ead/Ea22-like family protein | - |
| G4551_RS14105 () | 2901492..2901692 | + | 201 | WP_003839192.1 | hypothetical protein | - |
| G4551_RS14110 () | 2901696..2902253 | + | 558 | WP_003839190.1 | hypothetical protein | - |
| G4551_RS14115 () | 2902255..2902823 | + | 569 | Protein_2764 | 3'-5' exoribonuclease | - |
| G4551_RS14120 () | 2902864..2903100 | + | 237 | WP_003839185.1 | excisionase family protein | - |
| G4551_RS14125 () | 2903159..2904472 | + | 1314 | WP_003839182.1 | hypothetical protein ; Integrase | Integrase |
| G4551_RS14130 () | 2904451..2905224 | + | 774 | WP_050499175.1 | DUF72 domain-containing protein | - |
| G4551_RS14135 () | 2905277..2905672 | + | 396 | WP_003034689.1 | MAPEG family protein | - |
| G4551_RS14140 () | 2905713..2906456 | + | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| G4551_RS14145 () | 2906453..2907421 | + | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| G4551_RS14150 () | 2907665..2908411 | - | 747 | WP_003839174.1 | copper homeostasis protein CutC | - |
| G4551_RS14155 () | 2908414..2908980 | - | 567 | WP_003034677.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|