MGE detailed information
MGE type: Prophage MGE length: 59023 bp
Accession: NZ_CP048376 Location: 1954573..2013595 Organism: Escherichia coli strain 38 Replicon: chromosome
Accession: NZ_CP048376 Location: 1954573..2013595 Organism: Escherichia coli strain 38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS06_RS09270 () | 1950991..1951962 | - | 972 | WP_000564745.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| GZS06_RS09275 () | 1951959..1952702 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| GZS06_RS09280 () | 1952743..1953138 | - | 396 | WP_001356287.1 | MAPEG family protein | - |
| GZS06_RS09285 () | 1953191..1953538 | - | 348 | WP_000599617.1 | DUF72 domain-containing protein | - |
| GZS06_RS09290 () | 1954573..1955097 | - | 525 | WP_000258747.1 | HNH endonuclease | - |
| GZS06_RS09295 () | 1956674..1957231 | + | 558 | WP_023147813.1 | hypothetical protein | - |
| GZS06_RS09300 () | 1957232..1957510 | + | 279 | WP_001753400.1 | hypothetical protein | - |
| GZS06_RS09305 () | 1957510..1957725 | + | 216 | WP_001681135.1 | hypothetical protein | - |
| GZS06_RS09310 () | 1957722..1958009 | + | 288 | WP_000805963.1 | HNH endonuclease | - |
| GZS06_RS09315 () | 1958165..1958488 | + | 324 | WP_001678977.1 | hypothetical protein | - |
| GZS06_RS09320 () | 1959027..1959737 | + | 711 | WP_001681134.1 | hypothetical protein | - |
| GZS06_RS09325 () | 1959746..1960054 | + | 309 | WP_001678975.1 | hypothetical protein | - |
| GZS06_RS09330 () | 1960080..1960283 | + | 204 | WP_001678974.1 | hypothetical protein | - |
| GZS06_RS09335 () | 1960442..1962175 | + | 1734 | Protein_1820 | tape measure protein | - |
| GZS06_RS09345 () | 1963506..1963826 | + | 321 | Protein_1822 | phage tail tape measure protein | - |
| GZS06_RS09350 () | 1963984..1964757 | + | 774 | WP_001678972.1 | hypothetical protein | - |
| GZS06_RS09355 () | 1965415..1966956 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| GZS06_RS09360 () | 1966971..1967717 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| GZS06_RS09365 () | 1967802..1968881 | - | 1080 | Protein_1826 | hypothetical protein ; Integrase | Integrase |
| GZS06_RS09370 () | 1968934..1969428 | - | 495 | WP_000639268.1 | DUF72 domain-containing protein | - |
| GZS06_RS09375 () | 1969425..1969991 | - | 567 | WP_000891618.1 | hydrolase | - |
| GZS06_RS09380 () | 1970301..1972073 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| GZS06_RS09385 () | 1972191..1972643 | + | 453 | WP_001443602.1 | dihydroneopterin triphosphate diphosphatase | - |
| GZS06_RS09390 () | 1972672..1973412 | + | 741 | WP_000907248.1 | hypothetical protein | VF |
| GZS06_RS09395 () | 1973447..1973968 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| GZS06_RS09400 () | 1973970..1974572 | - | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| GZS06_RS09405 () | 1974643..1974708 | + | 66 | WP_001386853.1 | stress response small protein YobI | - |
| GZS06_RS09410 () | 1974847..1975458 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| GZS06_RS09415 () | 1975467..1976477 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| GZS06_RS09420 () | 1976624..1977409 | - | 786 | WP_000571479.1 | hypothetical protein | VF |
| GZS06_RS09425 () | 1977406..1978161 | - | 756 | WP_000202996.1 | hypothetical protein | VF |
| GZS06_RS09430 () | 1978240..1979172 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| GZS06_RS09435 () | 1979188..1980510 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| GZS06_RS09440 () | 1980630..1981601 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| GZS06_RS09445 () | 1981732..1983174 | - | 1443 | WP_000091176.1 | pyruvate kinase | - |
| GZS06_RS09450 () | 1983302..1984171 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| GZS06_RS09455 () | 1984509..1985984 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| GZS06_RS09460 () | 1986219..1988030 | + | 1812 | WP_060621242.1 | phosphogluconate dehydratase | - |
| GZS06_RS09465 () | 1988067..1988708 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| GZS06_RS09470 () | 1988764..1989942 | - | 1179 | WP_000173475.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| GZS06_RS09475 () | 1990076..1990366 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| GZS06_RS09480 () | 1990433..1990789 | + | 357 | WP_001295500.1 | protein YebF | - |
| GZS06_RS09485 () | 1991116..1991775 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| GZS06_RS09490 () | 1991984..1994044 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| GZS06_RS09495 () | 1994041..1994703 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| GZS06_RS09500 () | 1994727..1995383 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| GZS06_RS09505 () | 1995485..1995715 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| GZS06_RS09510 () | 1995854..1996228 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| GZS06_RS09515 () | 1996232..1997104 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| GZS06_RS09520 () | 1997117..1997458 | + | 342 | WP_000976492.1 | YebY family protein | - |
| - () | 1997486..1997757 | - | 272 | - | - | Antitoxin Detail |
| - () | 1997616..1997719 | + | 104 | - | - | Toxin Detail |
| GZS06_RS09525 () | 1997854..1998510 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| GZS06_RS09530 () | 1998511..1998702 | - | 192 | WP_001296140.1 | YebW family protein | - |
| GZS06_RS09535 () | 1998807..1999043 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| GZS06_RS09540 () | 1999161..2000600 | - | 1440 | WP_000057023.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GZS06_RS09545 () | 2000680..2003313 | - | 2634 | WP_001356288.1 | hypothetical protein | VF |
| GZS06_RS09550 () | 2003282..2004565 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| GZS06_RS09555 () | 2004695..2005192 | + | 498 | WP_001373833.1 | L-methionine (R)-S-oxide reductase | - |
| GZS06_RS09560 () | 2005289..2005987 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| GZS06_RS09565 () | 2006007..2008055 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| GZS06_RS09570 () | 2008247..2009128 | + | 882 | WP_000984517.1 | protease HtpX | - |
| GZS06_RS09575 () | 2009174..2010547 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| GZS06_RS09580 () | 2010724..2011515 | + | 792 | WP_001262192.1 | DNA-binding transcriptional regulator KdgR | - |
| GZS06_RS09585 () | 2011658..2011897 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| GZS06_RS09590 () | 2012056..2012199 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| GZS06_RS09595 () | 2012274..2012561 | + | 288 | WP_001006866.1 | YebO family protein | - |
| GZS06_RS09600 () | 2013230..2013373 | + | 144 | WP_001295496.1 | YobF family protein | - |
| GZS06_RS09605 () | 2013386..2013595 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| GZS06_RS09610 () | 2013761..2014570 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| GZS06_RS09615 () | 2014567..2015133 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| GZS06_RS09620 () | 2015562..2016020 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| GZS06_RS09625 () | 2016075..2016926 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| GZS06_RS09630 () | 2016939..2017739 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|