MGE detailed information
MGE type: Prophage MGE length: 120405 bp
Accession: NZ_CP047544 Location: 3685252..3805656 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250 Replicon: chromosome
Accession: NZ_CP047544 Location: 3685252..3805656 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SJTUF10250 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXN29_RS18210 () | 3681006..3682010 | - | 1005 | WP_000074605.1 | ferrioxamine uptake transcriptional regulator FoxR | - |
| DXN29_RS18215 () | 3682106..3682330 | - | 225 | WP_001541927.1 | membrane protein | - |
| DXN29_RS18220 () | 3682347..3683357 | - | 1011 | WP_000151047.1 | cytochrome d ubiquinol oxidase subunit II | - |
| DXN29_RS18225 () | 3683354..3684757 | - | 1404 | WP_000393711.1 | cytochrome ubiquinol oxidase subunit I | - |
| DXN29_RS18230 () | 3684874..3684975 | - | 102 | WP_000934834.1 | small effector SsaA | - |
| DXN29_RS18235 () | 3685252..3688224 | - | 2973 | WP_001651666.1 | type III restriction-modification system endonuclease | - |
| DXN29_RS18240 () | 3688234..3690192 | - | 1959 | WP_000910371.1 | site-specific DNA-methyltransferase | - |
| DXN29_RS18245 () | 3690381..3691634 | - | 1254 | WP_000288496.1 | MFS transporter | - |
| DXN29_RS18250 () | 3691927..3692121 | - | 195 | WP_001159470.1 | gold resistance metallochaperone GolB | - |
| DXN29_RS18255 () | 3692199..3692663 | - | 465 | WP_001020583.1 | Au(I) sensor transcriptional regulator GolS | - |
| DXN29_RS18260 () | 3692675..3694963 | - | 2289 | WP_000083318.1 | gold/copper-translocating P-type ATPase GolT | - |
| DXN29_RS18265 () | 3695240..3696466 | + | 1227 | WP_001254844.1 | hypothetical protein | VF |
| DXN29_RS18270 () | 3696463..3699630 | + | 3168 | WP_000673160.1 | hypothetical protein | VF |
| DXN29_RS18275 () | 3699647..3701104 | + | 1458 | WP_001521068.1 | hypothetical protein | VF |
| DXN29_RS18280 () | 3701174..3701533 | - | 360 | WP_000722978.1 | DUF4156 domain-containing protein | - |
| DXN29_RS18285 () | 3701591..3701815 | - | 225 | WP_000737127.1 | membrane protein | - |
| DXN29_RS18290 () | 3701826..3702467 | - | 642 | WP_033567211.1 | helix-turn-helix transcriptional regulator | - |
| DXN29_RS18295 () | 3702611..3703135 | - | 525 | WP_000830237.1 | hypothetical protein | VF |
| DXN29_RS18300 () | 3703537..3704025 | - | 489 | WP_000545421.1 | hypothetical protein | - |
| DXN29_RS18305 () | 3703998..3704741 | - | 744 | WP_000081378.1 | hypothetical protein | VF |
| DXN29_RS18310 () | 3704841..3706415 | - | 1575 | WP_000868285.1 | hypothetical protein | VF |
| DXN29_RS18315 () | 3706915..3707215 | - | 301 | Protein_3590 | hypothetical protein | - |
| DXN29_RS18320 () | 3707188..3707922 | - | 735 | WP_001006010.1 | hypothetical protein | VF |
| DXN29_RS18325 () | 3708586..3709122 | + | 537 | WP_000062035.1 | hypothetical protein | VF |
| DXN29_RS18330 () | 3709184..3709945 | + | 762 | WP_000781488.1 | hypothetical protein | VF |
| DXN29_RS18335 () | 3709929..3712490 | + | 2562 | WP_033567212.1 | hypothetical protein | VF |
| DXN29_RS18340 () | 3712495..3713820 | + | 1326 | WP_000899100.1 | fimbrial usher protein StbD | - |
| DXN29_RS18345 () | 3713786..3714544 | + | 759 | WP_001247039.1 | hypothetical protein | VF |
| DXN29_RS18350 () | 3714591..3714989 | - | 399 | WP_000766837.1 | outer membrane protein | - |
| DXN29_RS18355 () | 3715680..3715952 | + | 273 | WP_001675688.1 | hypothetical protein | - |
| DXN29_RS18360 () | 3715897..3716862 | - | 966 | WP_000859023.1 | LysR family transcriptional regulator | - |
| DXN29_RS18365 () | 3716896..3717810 | - | 915 | WP_000105593.1 | alpha/beta hydrolase | - |
| DXN29_RS18370 () | 3717810..3718688 | - | 879 | WP_000780210.1 | fumarylacetoacetate hydrolase family protein | - |
| DXN29_RS18375 () | 3718703..3719329 | - | 627 | WP_000379343.1 | 3-isopropylmalate dehydratase small subunit | - |
| DXN29_RS18380 () | 3719331..3720752 | - | 1422 | WP_001274854.1 | 3-isopropylmalate dehydratase large subunit | - |
| DXN29_RS18385 () | 3720884..3722122 | - | 1239 | WP_012543325.1 | MFS transporter | - |
| DXN29_RS18390 () | 3722463..3722786 | - | 324 | WP_001539227.1 | DUF1889 family protein | - |
| DXN29_RS18395 () | 3722896..3723610 | - | 715 | Protein_3606 | diol dehydratase reactivase ATPase-like domain-containing protein | - |
| DXN29_RS18400 () | 3723612..3724391 | + | 780 | Protein_3607 | IS3 family transposase | - |
| DXN29_RS18405 () | 3724976..3725338 | + | 363 | WP_000915528.1 | hypothetical protein | VF |
| DXN29_RS18410 () | 3725335..3726267 | + | 933 | WP_000703639.1 | hypothetical protein | VF |
| DXN29_RS18415 () | 3726257..3727714 | + | 1458 | WP_000671496.1 | glucosyltransferase domain-containing protein | - |
| DXN29_RS18420 () | 3727773..3729776 | - | 2004 | WP_000129928.1 | tail spike protein | - |
| DXN29_RS18425 () | 3729912..3730163 | + | 252 | WP_000532175.1 | Arc family DNA-binding protein | - |
| DXN29_RS18430 () | 3730263..3730442 | + | 180 | WP_001085430.1 | hypothetical protein | - |
| DXN29_RS18435 () | 3730456..3730821 | - | 366 | WP_000757527.1 | hypothetical protein | - |
| DXN29_RS18440 () | 3730852..3731181 | + | 330 | WP_000889769.1 | hypothetical protein | - |
| DXN29_RS18445 () | 3731199..3733112 | - | 1914 | WP_001262317.1 | hypothetical protein | - |
| DXN29_RS18450 () | 3733112..3734395 | - | 1284 | WP_033572424.1 | DNA transfer protein | - |
| DXN29_RS18455 () | 3734406..3735095 | - | 690 | WP_000964900.1 | hypothetical protein | - |
| DXN29_RS18460 () | 3735098..3735553 | - | 456 | WP_000627695.1 | DUF2824 family protein | - |
| DXN29_RS18465 () | 3735553..3736254 | - | 702 | WP_022631116.1 | hypothetical protein | - |
| DXN29_RS18470 () | 3736258..3737676 | - | 1419 | WP_131166468.1 | packaged DNA stabilization protein gp10 | - |
| DXN29_RS18475 () | 3737636..3738136 | - | 501 | WP_001166093.1 | packaged DNA stabilization gp4 family protein | - |
| DXN29_RS18480 () | 3738120..3738680 | - | 561 | WP_000538674.1 | hypothetical protein | - |
| DXN29_RS18485 () | 3738721..3740013 | - | 1293 | WP_022630931.1 | P22 phage major capsid protein family protein | - |
| DXN29_RS18490 () | 3740013..3740924 | - | 912 | WP_006831698.1 | scaffolding protein | - |
| DXN29_RS18495 () | 3740938..3743115 | - | 2178 | WP_000774652.1 | portal protein | - |
| DXN29_RS18500 () | 3743115..3744614 | - | 1500 | WP_000417860.1 | terminase large subunit | - |
| DXN29_RS18505 () | 3744592..3745080 | - | 489 | WP_000729923.1 | DNA-packaging protein | - |
| DXN29_RS18510 () | 3745084..3745488 | - | 405 | WP_001687044.1 | hypothetical protein | - |
| DXN29_RS18515 () | 3745488..3745877 | - | 390 | WP_001140562.1 | hypothetical protein | - |
| DXN29_RS18520 () | 3745881..3746123 | - | 243 | WP_000808099.1 | DUF2560 family protein | - |
| DXN29_RS18525 () | 3746346..3746876 | - | 531 | WP_015995148.1 | KilA-N domain-containing protein | - |
| DXN29_RS18530 () | 3747089..3747556 | - | 468 | WP_001687043.1 | lysis protein | - |
| DXN29_RS18535 () | 3747553..3748050 | - | 498 | WP_024136257.1 | lysozyme | - |
| DXN29_RS18540 () | 3748028..3748231 | - | 204 | WP_000286100.1 | phage holin family protein | - |
| DXN29_RS18555 () | 3748768..3749541 | - | 774 | WP_033572422.1 | antitermination protein | - |
| DXN29_RS18560 () | 3749699..3749941 | - | 243 | WP_023217800.1 | hypothetical protein | - |
| DXN29_RS18565 () | 3749938..3750120 | - | 183 | WP_033572421.1 | hypothetical protein | - |
| DXN29_RS18570 () | 3750559..3750795 | - | 237 | WP_023250726.1 | hypothetical protein | - |
| DXN29_RS18575 () | 3750788..3750964 | - | 177 | WP_033572420.1 | protein NinF | - |
| DXN29_RS18580 () | 3750957..3751358 | - | 402 | WP_033572419.1 | hypothetical protein | - |
| DXN29_RS18585 () | 3751361..3751537 | - | 177 | WP_000113767.1 | NinE family protein | - |
| DXN29_RS18590 () | 3751504..3751677 | - | 174 | WP_000679699.1 | protein NinD | - |
| DXN29_RS18595 () | 3751674..3752546 | - | 873 | WP_001573980.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| DXN29_RS18600 () | 3752543..3752983 | - | 441 | WP_000736920.1 | recombination protein NinB | - |
| DXN29_RS18605 () | 3753057..3754433 | - | 1377 | WP_001248409.1 | replicative DNA helicase | - |
| DXN29_RS18610 () | 3754430..3755263 | - | 834 | WP_000067076.1 | replication protein | - |
| DXN29_RS18615 () | 3755256..3755402 | - | 147 | WP_001125981.1 | DUF2740 family protein | - |
| DXN29_RS18620 () | 3755437..3755718 | - | 282 | WP_001103492.1 | CII family transcriptional regulator | - |
| DXN29_RS18625 () | 3755829..3756044 | - | 216 | WP_000067726.1 | helix-turn-helix transcriptional regulator | - |
| DXN29_RS18630 () | 3756163..3756825 | + | 663 | WP_023135942.1 | LexA family transcriptional regulator | - |
| DXN29_RS18640 () | 3757177..3757479 | + | 303 | WP_033572418.1 | hypothetical protein | - |
| DXN29_RS18645 () | 3757492..3758079 | - | 588 | WP_033572417.1 | superinfection exclusion B family protein | - |
| DXN29_RS18650 () | 3758272..3758772 | + | 501 | WP_033572416.1 | HNH endonuclease | - |
| DXN29_RS18655 () | 3758806..3759093 | + | 288 | WP_033572415.1 | hypothetical protein | - |
| DXN29_RS25950 () | 3759093..3759218 | + | 126 | WP_000405108.1 | hypothetical protein | - |
| DXN29_RS18660 () | 3759428..3759586 | + | 159 | WP_000141641.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| DXN29_RS18665 () | 3759567..3759755 | + | 189 | WP_000156731.1 | DUF5444 family protein | - |
| DXN29_RS18670 () | 3759745..3759888 | + | 144 | WP_000902090.1 | hypothetical protein | - |
| DXN29_RS18675 () | 3759885..3760592 | + | 708 | WP_033572414.1 | Rad52/Rad22 family DNA repair protein | - |
| DXN29_RS18680 () | 3760592..3760876 | + | 285 | WP_001253476.1 | sigma-70 family RNA polymerase sigma factor | - |
| DXN29_RS18685 () | 3760923..3761216 | + | 294 | WP_001111312.1 | DUF2856 family protein | - |
| DXN29_RS18690 () | 3761227..3761397 | + | 171 | WP_001214769.1 | DUF2737 family protein | - |
| DXN29_RS18695 () | 3761394..3761918 | + | 525 | WP_050517928.1 | hypothetical protein | - |
| DXN29_RS18700 () | 3761915..3762820 | + | 906 | WP_033572413.1 | ead/Ea22-like family protein | - |
| DXN29_RS18705 () | 3762822..3763040 | + | 219 | WP_033572412.1 | DUF4014 family protein | - |
| DXN29_RS18710 () | 3763044..3763715 | + | 672 | WP_033572411.1 | DUF550 domain-containing protein | - |
| DXN29_RS18715 () | 3763739..3763831 | + | 93 | Protein_3668 | hypothetical protein | - |
| DXN29_RS18720 () | 3763838..3764245 | + | 408 | Protein_3669 | DUF551 domain-containing protein | - |
| DXN29_RS18725 () | 3764342..3764521 | + | 180 | WP_001277764.1 | Eag protein | - |
| DXN29_RS18730 () | 3764622..3765251 | + | 630 | WP_033572425.1 | DUF5420 family protein | - |
| DXN29_RS18735 () | 3765254..3765604 | + | 351 | WP_072032115.1 | helix-turn-helix domain-containing protein | - |
| DXN29_RS18740 () | 3765526..3766644 | + | 1119 | WP_223197173.1 | hypothetical protein ; Integrase | Integrase |
| DXN29_RS18750 () | 3766850..3768100 | - | 1251 | WP_000893231.1 | glutamate-5-semialdehyde dehydrogenase | - |
| DXN29_RS18755 () | 3768112..3769215 | - | 1104 | WP_001285275.1 | glutamate 5-kinase | - |
| DXN29_RS18760 () | 3769498..3770550 | + | 1053 | WP_001043675.1 | phosphoporin PhoE | - |
| DXN29_RS18765 () | 3770601..3771002 | - | 402 | WP_000174696.1 | sigma factor-binding protein Crl | - |
| DXN29_RS18770 () | 3771060..3772304 | - | 1245 | WP_000189588.1 | esterase FrsA | - |
| DXN29_RS18775 () | 3772393..3772851 | - | 459 | WP_001292018.1 | xanthine phosphoribosyltransferase | - |
| DXN29_RS18780 () | 3773100..3774557 | + | 1458 | WP_001292977.1 | cytosol nonspecific dipeptidase | - |
| DXN29_RS18785 () | 3774713..3775327 | - | 615 | WP_000602086.1 | peptide chain release factor H | - |
| DXN29_RS18790 () | 3775324..3776456 | - | 1133 | Protein_3682 | RNA ligase RtcB family protein | - |
| DXN29_RS18795 () | 3776675..3777729 | - | 1055 | Protein_3683 | DNA polymerase IV | - |
| DXN29_RS18800 () | 3777979..3778719 | + | 741 | WP_001225658.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| DXN29_RS18805 () | 3778690..3779457 | - | 768 | WP_000333387.1 | class II glutamine amidotransferase | - |
| DXN29_RS18810 () | 3779670..3780248 | - | 579 | WP_000284051.1 | hypothetical protein | VF |
| DXN29_RS18815 () | 3780488..3782932 | + | 2445 | WP_000973041.1 | hypothetical protein | VF |
| DXN29_RS18820 () | 3783041..3783808 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| DXN29_RS18825 () | 3784179..3784586 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| DXN29_RS18830 () | 3784917..3785636 | + | 720 | WP_022630913.1 | hypothetical protein | VF |
| DXN29_RS18835 () | 3785640..3785855 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| DXN29_RS18840 () | 3785972..3786919 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| DXN29_RS18845 () | 3787411..3787651 | - | 241 | Protein_3693 | PerC family transcriptional regulator | - |
| DXN29_RS18850 () | 3787734..3788555 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| DXN29_RS18855 () | 3788961..3789431 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| DXN29_RS18860 () | 3789453..3791963 | - | 2511 | WP_000669634.1 | hypothetical protein | VF |
| DXN29_RS18865 () | 3791987..3792724 | - | 738 | WP_001535430.1 | hypothetical protein | VF |
| DXN29_RS18870 () | 3792808..3793320 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| DXN29_RS18875 () | 3794070..3794774 | - | 705 | Protein_3699 | integrase core domain-containing protein | - |
| DXN29_RS18880 () | 3794827..3795075 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| DXN29_RS18885 () | 3795177..3795485 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| DXN29_RS18890 () | 3795568..3795741 | - | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| - | 3795769..3796191 | - | 423 | - | - | Antitoxin Detail |
| DXN29_RS18895 () | 3795926..3796201 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| DXN29_RS18900 () | 3796254..3796691 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| DXN29_RS18905 () | 3797254..3797700 | - | 447 | WP_000935097.1 | protein SciX | - |
| DXN29_RS18910 () | 3797694..3798563 | - | 870 | Protein_3706 | hypothetical protein | VF |
| DXN29_RS18915 () | 3798627..3798890 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| DXN29_RS18920 () | 3798884..3802978 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| DXN29_RS18925 () | 3802997..3803443 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| DXN29_RS18930 () | 3803467..3805656 | - | 2190 | WP_000011534.1 | hypothetical protein | VF |
| DXN29_RS18935 () | 3806053..3806574 | - | 522 | WP_077248259.1 | DUF2778 domain-containing protein | - |
| DXN29_RS18940 () | 3806598..3807014 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| DXN29_RS18945 () | 3807011..3807799 | - | 789 | WP_001254137.1 | TagF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|