MGE detailed information
MGE type: Prophage MGE length: 48427 bp
Accession: NZ_CP047378 Location: 608436..656862 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Accession: NZ_CP047378 Location: 608436..656862 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTP13_RS02920 () | 604137..607916 | + | 3780 | WP_000060925.1 | autotransporter assembly complex protein TamB | - |
| GTP13_RS02925 () | 607919..608260 | + | 342 | WP_001219160.1 | gamma-glutamylcyclotransferase | - |
| GTP13_RS02930 () | 608436..608678 | + | 243 | WP_000288983.1 | hypothetical protein | - |
| GTP13_RS02935 () | 608671..608904 | + | 234 | WP_071533696.1 | membrane protein insertion efficiency factor YidD | - |
| GTP13_RS02940 () | 609034..609174 | - | 141 | WP_000078920.1 | Hok/Gef family protein | - |
| GTP13_RS02945 () | 609366..609626 | - | 261 | WP_167582571.1 | ogr/Delta-like zinc finger family protein | - |
| GTP13_RS02950 () | 609669..610769 | - | 1101 | WP_000132818.1 | phage late control D family protein | - |
| GTP13_RS02955 () | 610927..612111 | + | 1185 | WP_000005431.1 | phage tail sheath family protein | - |
| GTP13_RS02960 () | 612111..612623 | + | 513 | WP_000290450.1 | phage major tail tube protein | - |
| GTP13_RS02965 () | 612678..613043 | + | 366 | WP_000665314.1 | tail protein | - |
| GTP13_RS02970 () | 613052..613207 | + | 156 | WP_000333494.1 | GpE family phage tail protein | - |
| GTP13_RS02975 () | 613194..616001 | + | 2808 | WP_000853388.1 | phage tail tape measure protein | - |
| GTP13_RS02980 () | 616014..616502 | + | 489 | WP_000979954.1 | phage tail protein | - |
| GTP13_RS02985 () | 616529..617128 | - | 600 | WP_001525166.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| GTP13_RS02990 () | 617556..617996 | + | 441 | WP_131419410.1 | tail fiber assembly protein | - |
| GTP13_RS02995 () | 617968..618570 | - | 603 | WP_131419412.1 | tail fiber assembly protein | - |
| GTP13_RS03000 () | 618570..619904 | - | 1335 | WP_167582574.1 | phage tail protein | - |
| GTP13_RS03005 () | 619901..620509 | - | 609 | WP_000071724.1 | phage tail protein I | - |
| GTP13_RS03010 () | 620502..621398 | - | 897 | WP_052893181.1 | baseplate J/gp47 family protein | - |
| GTP13_RS03015 () | 621402..621731 | - | 330 | WP_001067548.1 | GPW/gp25 family protein | - |
| GTP13_RS03020 () | 621749..622315 | - | 567 | WP_209279477.1 | phage baseplate assembly protein V | - |
| GTP13_RS03025 () | 622327..622962 | - | 636 | WP_052893183.1 | phage virion morphogenesis protein | - |
| GTP13_RS03030 () | 622955..623422 | - | 468 | WP_000920593.1 | phage tail protein | - |
| GTP13_RS03035 () | 623560..623967 | - | 408 | WP_032083488.1 | DUF2570 domain-containing protein | - |
| GTP13_RS03040 () | 623964..624356 | - | 393 | WP_000072327.1 | M15 family metallopeptidase | - |
| GTP13_RS03045 () | 624353..624676 | - | 324 | WP_000104350.1 | phage holin family protein | - |
| GTP13_RS03050 () | 624679..624879 | - | 201 | WP_000864901.1 | tail protein X | - |
| GTP13_RS03055 () | 624879..625373 | - | 495 | WP_000063082.1 | head completion/stabilization protein | - |
| GTP13_RS03060 () | 625476..626276 | - | 801 | WP_112924774.1 | terminase | - |
| GTP13_RS03065 () | 626322..627374 | - | 1053 | WP_113287016.1 | phage major capsid protein, P2 family | - |
| GTP13_RS03070 () | 627398..628234 | - | 837 | WP_020218747.1 | GPO family capsid scaffolding protein | - |
| GTP13_RS03075 () | 628389..630140 | + | 1752 | WP_167582580.1 | terminase family protein | - |
| GTP13_RS03080 () | 630140..631186 | + | 1047 | WP_000087812.1 | phage portal protein | - |
| GTP13_RS03085 () | 631674..631943 | - | 270 | WP_001390707.1 | hypothetical protein | - |
| GTP13_RS03090 () | 632308..632619 | - | 312 | WP_000211267.1 | plasmid partitioning/stability family protein | - |
| GTP13_RS03095 () | 632624..633583 | - | 960 | WP_001525150.1 | plasmid segregation protein ParM | - |
| GTP13_RS03100 () | 633660..636483 | - | 2824 | Protein_598 | replication endonuclease | - |
| GTP13_RS03105 () | 636490..636855 | - | 366 | WP_000599398.1 | hypothetical protein | - |
| GTP13_RS03110 () | 636852..637472 | - | 621 | WP_157895439.1 | ash family protein | - |
| GTP13_RS03115 () | 637526..638356 | - | 831 | WP_001603062.1 | serine protease | - |
| GTP13_RS03120 () | 638353..638556 | - | 204 | WP_001036809.1 | hypothetical protein | - |
| GTP13_RS03125 () | 638553..638867 | - | 315 | WP_046788693.1 | ead/Ea22-like family protein | - |
| GTP13_RS03130 () | 638864..639109 | - | 246 | WP_000153676.1 | winged helix-turn-helix domain-containing protein | - |
| GTP13_RS03135 () | 639106..639309 | - | 204 | WP_001560998.1 | hypothetical protein | - |
| GTP13_RS03140 () | 639396..639509 | - | 114 | WP_000021656.1 | hypothetical protein | - |
| GTP13_RS03145 () | 639506..639748 | - | 243 | WP_000514277.1 | DUF4754 family protein | - |
| GTP13_RS03150 () | 639760..640038 | - | 279 | WP_000159895.1 | hypothetical protein | - |
| GTP13_RS03155 () | 640049..640399 | - | 351 | WP_167582583.1 | DUF4761 family protein | - |
| GTP13_RS03160 () | 640437..640862 | - | 426 | WP_001158283.1 | regulatory protein | - |
| GTP13_RS03165 () | 640971..641270 | + | 300 | WP_021580386.1 | helix-turn-helix transcriptional regulator | - |
| GTP13_RS03170 () | 641337..642332 | + | 996 | WP_001372721.1 | hypothetical protein ; Integrase | Integrase |
| GTP13_RS03175 () | 642623..642874 | + | 252 | WP_096317499.1 | type II toxin-antitoxin system antitoxin ChpS | Antitoxin Detail |
| GTP13_RS03180 () | 642868..643218 | + | 351 | WP_000239579.1 | endoribonuclease toxin ChpB | Toxin Detail |
| GTP13_RS03185 () | 643298..643828 | - | 531 | WP_000055075.1 | inorganic diphosphatase | - |
| GTP13_RS03190 () | 644138..645094 | + | 957 | WP_000265933.1 | galactofuranose ABC transporter substrate-binding protein YtfQ | - |
| GTP13_RS03195 () | 645234..646736 | + | 1503 | WP_167582586.1 | hypothetical protein | VF |
| GTP13_RS03200 () | 646750..647772 | + | 1023 | WP_001296689.1 | ABC transporter permease | - |
| GTP13_RS03205 () | 647759..648754 | + | 996 | WP_000596015.1 | sugar ABC transporter permease YjfF | - |
| GTP13_RS03210 () | 648787..649785 | - | 999 | WP_000853753.1 | class 1 fructose-bisphosphatase | - |
| GTP13_RS03215 () | 649961..651334 | + | 1374 | WP_106505212.1 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | - |
| GTP13_RS03220 () | 651490..652041 | - | 552 | WP_000166267.1 | ribosome-associated protein | - |
| GTP13_RS03225 () | 652135..653487 | + | 1353 | WP_096245411.1 | metalloprotease PmbA | - |
| GTP13_RS03230 () | 653670..654056 | + | 387 | WP_001232240.1 | cytochrome b562 | - |
| GTP13_RS03235 () | 654101..654565 | - | 465 | WP_001106238.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| GTP13_RS03240 () | 654724..656862 | - | 2139 | WP_000187778.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| GTP13_RS03245 () | 657255..658910 | - | 1656 | WP_001341327.1 | alpha,alpha-phosphotrehalase | - |
| GTP13_RS03250 () | 658960..660381 | - | 1422 | WP_001297258.1 | PTS trehalose transporter subunit IIBC | - |
| GTP13_RS03255 () | 660500..661447 | - | 948 | WP_001181312.1 | trehalose operon repressor TreR | - |
| GTP13_RS03260 () | 661632..661685 | + | 54 | WP_001387276.1 | mgtA regulatory leader peptide MgtL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|