MGE detailed information
MGE type: Prophage MGE length: 14325 bp
Accession: NZ_CP046728 Location: 2353482..2367806 Organism: Mycobacterium tuberculosis strain TCDC11 Replicon: chromosome
Accession: NZ_CP046728 Location: 2353482..2367806 Organism: Mycobacterium tuberculosis strain TCDC11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GP477_RS10900 () | 2348856..2349782 | - | 927 | WP_003410764.1 | twin-arginine translocase subunit TatC | - |
| GP477_RS10905 () | 2349799..2350050 | - | 252 | WP_003410768.1 | Sec-independent protein translocase subunit TatA | - |
| GP477_RS10910 () | 2350118..2351068 | - | 951 | WP_003410772.1 | YafY family transcriptional regulator | - |
| GP477_RS10915 () | 2351065..2352063 | - | 999 | WP_003902122.1 | YafY family transcriptional regulator | - |
| GP477_RS10920 () | 2352072..2353430 | - | 1359 | WP_003410781.1 | Pup--protein ligase | - |
| GP477_RS10925 () | 2353482..2354957 | - | 1476 | WP_003410786.1 | PE family protein | - |
| GP477_RS10930 () | 2355140..2356792 | + | 1653 | WP_175285369.1 | HNH endonuclease | - |
| GP477_RS10935 () | 2356991..2360032 | + | 3042 | WP_003899171.1 | DEAD/DEAH box helicase | - |
| GP477_RS10940 () | 2360142..2360858 | + | 717 | WP_003410793.1 | SWIM zinc finger family protein | - |
| GP477_RS10945 () | 2360837..2361271 | - | 435 | WP_003905754.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GP477_RS10950 () | 2361278..2361532 | - | 255 | WP_003410814.1 | antitoxin | Antitoxin Detail |
| GP477_RS10955 () | 2361548..2361805 | - | 258 | WP_003410816.1 | hypothetical protein | - |
| GP477_RS10960 () | 2362339..2363600 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| GP477_RS10965 () | 2364110..2364406 | + | 297 | WP_003410820.1 | PE family protein | - |
| GP477_RS10975 () | 2365821..2366495 | + | 675 | Protein_2170 | putative PPE family protein PPE36 | VF |
| GP477_RS10980 () | 2366545..2367806 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| GP477_RS10985 () | 2368450..2369196 | - | 747 | WP_003901330.1 | proteasome subunit alpha | - |
| GP477_RS10990 () | 2369193..2370068 | - | 876 | WP_003411023.1 | proteasome subunit beta | - |
| GP477_RS10995 () | 2370065..2370259 | - | 195 | WP_003411026.1 | ubiquitin-like protein Pup | - |
| GP477_RS11000 () | 2370372..2372066 | - | 1695 | WP_003906750.1 | proteasome accessory factor PafA2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|