MGE detailed information
MGE type: Prophage MGE length: 54648 bp
Accession: NZ_CP046003 Location: 1846252..1900899 Organism: Escherichia coli strain 1916D6 Replicon: chromosome
Accession: NZ_CP046003 Location: 1846252..1900899 Organism: Escherichia coli strain 1916D6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD94_RS09485 () | 1842120..1842170 | - | 51 | WP_001364200.1 | his operon leader peptide | - |
| GJD94_RS09490 () | 1842595..1843419 | + | 825 | WP_000754737.1 | SDR family oxidoreductase | - |
| GJD94_RS09495 () | 1843465..1844394 | + | 930 | WP_000803351.1 | LysR family transcriptional regulator | - |
| GJD94_RS09500 () | 1844609..1844671 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
| GJD94_RS09505 () | 1844661..1846019 | + | 1359 | WP_000019197.1 | putrescine/proton symporter PlaP | - |
| GJD94_RS09510 () | 1846198..1847256 | + | 1059 | WP_064670362.1 | transport protein YeeE | - |
| GJD94_RS09515 () | 1847270..1847497 | + | 228 | WP_000985273.1 | sulfurtransferase TusA family protein | - |
| GJD94_RS09520 () | 1847540..1848964 | - | 1425 | WP_085438546.1 | exodeoxyribonuclease I | - |
| GJD94_RS09525 () | 1849146..1850324 | + | 1179 | WP_048266533.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GJD94_RS09530 () | 1850305..1850496 | - | 192 | WP_000132739.1 | AlpA family phage regulatory protein | - |
| GJD94_RS09535 () | 1850836..1851003 | - | 168 | WP_000545720.1 | hypothetical protein | - |
| GJD94_RS09540 () | 1851104..1851406 | - | 303 | WP_154205236.1 | Lar family restriction alleviation protein | - |
| GJD94_RS09545 () | 1851403..1851999 | - | 597 | WP_154205238.1 | DUF550 domain-containing protein | - |
| GJD94_RS09550 () | 1852002..1852193 | - | 192 | WP_000348980.1 | hypothetical protein | - |
| GJD94_RS09555 () | 1852195..1852602 | - | 408 | WP_032285064.1 | ead/Ea22-like family protein | - |
| GJD94_RS09560 () | 1852604..1852903 | - | 300 | WP_000118152.1 | hypothetical protein | - |
| GJD94_RS09565 () | 1852900..1853067 | - | 168 | WP_016063110.1 | DUF2737 family protein | - |
| GJD94_RS09570 () | 1853078..1853371 | - | 294 | WP_001388110.1 | DUF2856 family protein | - |
| GJD94_RS09575 () | 1853385..1853891 | - | 507 | WP_000168274.1 | single-stranded DNA-binding protein | - |
| GJD94_RS09580 () | 1853892..1854599 | - | 708 | WP_000365280.1 | recombinase | - |
| GJD94_RS23635 () | 1854608..1854778 | - | 171 | WP_000050554.1 | hypothetical protein | - |
| GJD94_RS23640 () | 1854854..1855024 | - | 171 | WP_001183771.1 | hypothetical protein | - |
| GJD94_RS09590 () | 1855243..1855485 | - | 243 | WP_154205239.1 | hypothetical protein | - |
| GJD94_RS09595 () | 1855513..1855764 | - | 252 | WP_000394306.1 | hypothetical protein | - |
| GJD94_RS09600 () | 1855773..1856072 | - | 300 | WP_021512407.1 | hypothetical protein | - |
| GJD94_RS09605 () | 1856387..1857037 | - | 651 | WP_001095982.1 | LexA family transcriptional regulator | - |
| GJD94_RS09610 () | 1857118..1857303 | + | 186 | WP_000276885.1 | Cro/Cl family transcriptional regulator | - |
| GJD94_RS09615 () | 1857419..1857715 | + | 297 | WP_000035948.1 | hypothetical protein | - |
| GJD94_RS09620 () | 1857748..1858392 | + | 645 | WP_021823884.1 | GIY-YIG nuclease family protein | - |
| GJD94_RS09625 () | 1858379..1859221 | + | 843 | WP_052319315.1 | replication protein | - |
| GJD94_RS09630 () | 1859224..1860069 | + | 846 | WP_085701393.1 | IS21 family transposase ISSme2 | Transposase |
| GJD94_RS09635 () | 1860066..1860356 | + | 291 | WP_000145948.1 | hypothetical protein | - |
| GJD94_RS09640 () | 1860438..1860605 | + | 168 | WP_154205240.1 | hypothetical protein | - |
| GJD94_RS09645 () | 1860631..1860831 | + | 201 | WP_130951072.1 | hypothetical protein | - |
| GJD94_RS09650 () | 1860843..1861163 | + | 321 | WP_085455278.1 | hypothetical protein | - |
| GJD94_RS09655 () | 1861166..1861576 | + | 411 | WP_154205242.1 | recombination protein NinB | - |
| GJD94_RS09660 () | 1861573..1861749 | + | 177 | WP_001254220.1 | NinE family protein | - |
| GJD94_RS09665 () | 1861752..1862114 | + | 363 | WP_001351812.1 | DUF2591 family protein | - |
| GJD94_RS09670 () | 1862107..1862283 | + | 177 | WP_000950973.1 | protein ninF | - |
| GJD94_RS09675 () | 1862276..1863001 | + | 726 | WP_053292536.1 | DNA-binding protein | - |
| GJD94_RS09680 () | 1863001..1863291 | + | 291 | WP_032284927.1 | DUF1364 domain-containing protein | - |
| GJD94_RS09685 () | 1863288..1863650 | + | 363 | WP_154205244.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GJD94_RS09690 () | 1863647..1863835 | + | 189 | WP_000994516.1 | protein ninH | - |
| GJD94_RS09695 () | 1863832..1864350 | + | 519 | WP_021528613.1 | DUF1133 family protein | - |
| GJD94_RS09700 () | 1864932..1866062 | + | 1131 | WP_112958522.1 | IS200-IS605 family transposase ISEc42 | Transposase |
| GJD94_RS09705 () | 1866157..1866480 | + | 324 | WP_000783734.1 | phage holin, lambda family | - |
| GJD94_RS09710 () | 1866464..1866940 | + | 477 | WP_089564108.1 | glycoside hydrolase family protein | - |
| GJD94_RS09715 () | 1866937..1867404 | + | 468 | WP_154205245.1 | lysis protein | - |
| GJD94_RS09720 () | 1867392..1867544 | + | 153 | WP_053878044.1 | hypothetical protein | - |
| GJD94_RS09725 () | 1867746..1868264 | + | 519 | WP_001016386.1 | Rha family transcriptional regulator | - |
| GJD94_RS09730 () | 1868617..1868859 | + | 243 | WP_000807785.1 | DUF2560 family protein | - |
| GJD94_RS09735 () | 1868862..1869305 | + | 444 | WP_154205247.1 | terminase | - |
| GJD94_RS09740 () | 1869302..1870780 | + | 1479 | WP_040090633.1 | PBSX family phage terminase large subunit | - |
| GJD94_RS09745 () | 1870782..1872980 | + | 2199 | WP_154205248.1 | portal protein | - |
| GJD94_RS09750 () | 1873071..1873964 | + | 894 | WP_154205249.1 | scaffolding protein | - |
| GJD94_RS09755 () | 1873983..1875236 | + | 1254 | WP_001462595.1 | coat protein | - |
| GJD94_RS09760 () | 1875278..1875466 | + | 189 | WP_001462613.1 | hypothetical protein | - |
| GJD94_RS09765 () | 1875447..1875908 | + | 462 | WP_001140510.1 | head DNA stabilization protein | - |
| GJD94_RS09770 () | 1875918..1877336 | + | 1419 | WP_154205250.1 | packaged DNA stabilization protein gp10 | - |
| GJD94_RS09775 () | 1877336..1878037 | + | 702 | WP_154205251.1 | phage tail protein | - |
| GJD94_RS09780 () | 1878037..1878492 | + | 456 | WP_000627633.1 | DUF2824 family protein | - |
| GJD94_RS09785 () | 1878495..1879187 | + | 693 | WP_114443138.1 | DNA transfer protein | - |
| GJD94_RS09790 () | 1879197..1880528 | + | 1332 | WP_000246949.1 | phage DNA ejection protein | - |
| GJD94_RS09795 () | 1880529..1882922 | + | 2394 | WP_154205252.1 | lytic transglycosylase domain-containing protein | - |
| GJD94_RS09800 () | 1883163..1883585 | - | 423 | WP_195686760.1 | HNH endonuclease | - |
| GJD94_RS09805 () | 1883612..1885648 | + | 2037 | WP_154205254.1 | head-binding protein | - |
| GJD94_RS09810 () | 1885709..1886740 | + | 1032 | WP_104726698.1 | acyltransferase | - |
| GJD94_RS09815 () | 1886844..1887233 | + | 390 | WP_154205255.1 | LexA family transcriptional regulator | - |
| GJD94_RS09820 () | 1887577..1888743 | + | 1167 | WP_016247321.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| GJD94_RS09825 () | 1888862..1889335 | + | 474 | WP_001105415.1 | DNA gyrase inhibitor SbmC | - |
| GJD94_RS09830 () | 1889533..1890591 | + | 1059 | WP_064670363.1 | FUSC family protein | - |
| GJD94_RS09835 () | 1890763..1891092 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| GJD94_RS09840 () | 1891193..1891375 | - | 183 | WP_001016348.1 | hypothetical protein | - |
| GJD94_RS09845 () | 1891447..1891575 | + | 129 | Protein_1779 | transposase domain-containing protein | - |
| GJD94_RS09850 () | 1891864..1891977 | - | 114 | WP_001161660.1 | DUF957 domain-containing protein | - |
| GJD94_RS09855 () | 1891990..1892184 | - | 195 | WP_000988600.1 | hypothetical protein | - |
| GJD94_RS09860 () | 1892181..1892555 | - | 375 | WP_000854814.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| GJD94_RS09865 () | 1892644..1893012 | - | 369 | WP_001285585.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| GJD94_RS09870 () | 1893086..1893307 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| GJD94_RS09875 () | 1893370..1893846 | - | 477 | WP_001186773.1 | RadC family protein | - |
| GJD94_RS09880 () | 1893862..1894341 | - | 480 | WP_000860076.1 | antirestriction protein | - |
| GJD94_RS09885 () | 1894423..1895244 | - | 822 | WP_064670364.1 | DUF945 domain-containing protein | - |
| GJD94_RS09890 () | 1895465..1895875 | - | 411 | WP_000846713.1 | hypothetical protein | - |
| GJD94_RS09895 () | 1895891..1896574 | - | 684 | WP_000775500.1 | hypothetical protein | - |
| GJD94_RS09900 () | 1896710..1897780 | - | 1071 | WP_000102643.1 | patatin-like phospholipase family protein | - |
| GJD94_RS09905 () | 1897777..1898388 | - | 612 | Protein_1791 | chemotaxis protein | - |
| GJD94_RS09910 () | 1898437..1898838 | + | 402 | WP_000270974.1 | hypothetical protein | - |
| GJD94_RS09915 () | 1898826..1899236 | + | 411 | WP_001221617.1 | zinc-ribbon domain-containing protein | - |
| GJD94_RS09920 () | 1899520..1901139 | + | 1620 | Protein_1794 | ISL3 family transposase ISEc38 | Transposase |
| GJD94_RS09925 () | 1901219..1901511 | + | 293 | Protein_1795 | gamma-glutamyltransferase | - |
| GJD94_RS09930 () | 1901551..1902585 | - | 1035 | WP_000656352.1 | phosphotriesterase | - |
| GJD94_RS09935 () | 1902588..1903553 | - | 966 | Protein_1797 | DMT family transporter | - |
| GJD94_RS09940 () | 1903610..1904368 | - | 759 | WP_001066368.1 | hypothetical protein | - |
| GJD94_RS09945 () | 1904382..1905329 | - | 948 | WP_016244794.1 | ribokinase | - |
| GJD94_RS23645 () | 1905342..1905595 | - | 254 | Protein_1800 | DeoR/GlpR transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|