MGE detailed information
MGE type: Prophage MGE length: 25401 bp
Accession: NZ_CP045524 Location: 1278811..1304211 Organism: Shigella sonnei strain 6904.27 Replicon: chromosome
Accession: NZ_CP045524 Location: 1278811..1304211 Organism: Shigella sonnei strain 6904.27 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE168_RS06560 () | 1274615..1274902 | - | 288 | WP_001006860.1 | YebO family protein | - |
| GE168_RS06565 () | 1274977..1275120 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| GE168_RS06570 () | 1275279..1275518 | + | 240 | WP_001211011.1 | YobH family protein | - |
| GE168_RS06575 () | 1275661..1276452 | - | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| GE168_RS06580 () | 1276629..1277692 | + | 1064 | Protein_1290 | MFS transporter | - |
| GE168_RS06585 () | 1277738..1278619 | - | 882 | WP_000984517.1 | protease HtpX | - |
| GE168_RS06590 () | 1278811..1280859 | - | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| GE168_RS06595 () | 1280879..1281577 | - | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| GE168_RS06600 () | 1281674..1282171 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| GE168_RS06605 () | 1282301..1283584 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| GE168_RS06610 () | 1283553..1286186 | + | 2634 | WP_005138565.1 | hypothetical protein | VF |
| GE168_RS06615 () | 1286267..1287706 | + | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GE168_RS06620 () | 1287824..1287907 | + | 84 | Protein_1298 | DUF1480 family protein | - |
| GE168_RS06630 () | 1288679..1288837 | + | 159 | Protein_1300 | YebV family protein | - |
| GE168_RS06635 () | 1288942..1289133 | + | 192 | WP_001296140.1 | YebW family protein | - |
| GE168_RS06640 () | 1289134..1289334 | - | 201 | Protein_1302 | serine/threonine-protein phosphatase | - |
| GE168_RS06650 () | 1290590..1290895 | - | 306 | Protein_1304 | serine/threonine-protein phosphatase | - |
| GE168_RS06655 () | 1290950..1291647 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| GE168_RS06660 () | 1291661..1291834 | - | 174 | Protein_1306 | metallophosphoesterase | - |
| GE168_RS06665 () | 1292485..1293641 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| GE168_RS06670 () | 1293843..1295558 | + | 1716 | WP_011310192.1 | hypothetical protein | VF |
| GE168_RS06680 () | 1296975..1297235 | + | 261 | WP_077447296.1 | excisionase | - |
| GE168_RS06685 () | 1297264..1297718 | + | 455 | Protein_1311 | IS1-like element IS1A family transposase | - |
| GE168_RS06690 () | 1297813..1299042 | + | 1230 | WP_086558215.1 | IS3 family transposase IS2 | Transposase |
| GE168_RS06695 () | 1299053..1299298 | + | 246 | Protein_1313 | IS1 family transposase IS1R | Transposase |
| GE168_RS06700 () | 1299335..1300411 | + | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| - | 1300532..1300766 | + | 235 | - | - | Antitoxin Detail |
| - | 1300533..1300636 | - | 104 | - | - | Toxin Detail |
| GE168_RS06705 () | 1300794..1301135 | - | 342 | WP_000976476.1 | YebY family protein | - |
| GE168_RS06710 () | 1301148..1302020 | - | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| GE168_RS06715 () | 1302024..1302398 | - | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| GE168_RS06720 () | 1302537..1302767 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| GE168_RS06725 () | 1302869..1303525 | + | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| GE168_RS06730 () | 1303549..1304211 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| GE168_RS06735 () | 1304208..1306268 | - | 2061 | WP_000936913.1 | oligopeptidase B | - |
| GE168_RS06740 () | 1306477..1307136 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| GE168_RS06745 () | 1307463..1307819 | - | 357 | WP_001295500.1 | protein YebF | - |
| GE168_RS06750 () | 1307886..1308176 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|