MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91139 bp
Accession: NZ_CP044960 Location: 1..91139 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS007087 Replicon: plasmid PNCS007087 strain 14[5]12:i:-
Accession: NZ_CP044960 Location: 1..91139 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS007087 Replicon: plasmid PNCS007087 strain 14[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5O00_RS26160 () | 1..780 | + | 780 | WP_001323403.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| E5O00_RS25410 () | 824..1030 | - | 207 | WP_151884631.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E5O00_RS25415 () | 1027..1296 | - | 270 | WP_000079932.1 | hypothetical protein | Antitoxin Detail |
| E5O00_RS25430 () | 2204..3235 | - | 1032 | WP_001690254.1 | replication initiation protein | - |
| E5O00_RS25445 () | 4208..4471 | + | 264 | WP_001324596.1 | ash family protein | - |
| E5O00_RS25450 () | 4389..4676 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| E5O00_RS25460 () | 5118..5651 | + | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| E5O00_RS25470 () | 5905..6588 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| E5O00_RS25480 () | 6760..7134 | + | 375 | WP_001136188.1 | PilI type IV pilus biogenesis protein | - |
| E5O00_RS25495 () | 8106..9173 | + | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| E5O00_RS25500 () | 9173..9610 | + | 438 | WP_000539811.1 | type IV pilus biogenesis protein PilM | - |
| E5O00_RS25505 () | 9624..11306 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| E5O00_RS25510 () | 11299..12594 | + | 1296 | WP_001545757.1 | type 4b pilus protein PilO2 | - |
| E5O00_RS25515 () | 12581..13033 | + | 453 | WP_001247333.1 | type IV pilus biogenesis protein PilP | - |
| E5O00_RS25520 () | 13044..14597 | + | 1554 | WP_001685261.1 | Flp pilus assembly complex ATPase component TadA | - |
| E5O00_RS25525 () | 14610..15695 | + | 1086 | WP_084566389.1 | type II secretion system F family protein | - |
| E5O00_RS25530 () | 15712..16326 | + | 615 | WP_001685259.1 | pilS family protein | - |
| E5O00_RS25535 () | 16336..16896 | + | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| E5O00_RS25540 () | 16881..17537 | + | 657 | WP_001193549.1 | prepilin peptidase | - |
| E5O00_RS25545 () | 17537..18829 | + | 1293 | WP_064773165.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| E5O00_RS25550 () | 18826..19074 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| E5O00_RS25575 () | 20595..21749 | + | 1155 | WP_001139955.1 | integrase | - |
| E5O00_RS25580 () | 21900..22724 | + | 825 | WP_001238931.1 | conjugal transfer protein TraE | - |
| E5O00_RS25585 () | 22810..24012 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| E5O00_RS25590 () | 24072..24656 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| E5O00_RS25595 () | 25051..25509 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| E5O00_RS25600 () | 25506..26324 | + | 819 | WP_077684120.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| E5O00_RS25605 () | 26321..27469 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| E5O00_RS25610 () | 27466..27756 | + | 291 | WP_001372180.1 | hypothetical protein | - |
| E5O00_RS25615 () | 27771..28322 | + | 552 | WP_000014584.1 | phospholipase D family protein | - |
| E5O00_RS25620 () | 28412..32179 | + | 3768 | WP_151884632.1 | DNA primase | - |
| E5O00_RS25625 () | 32197..32544 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| E5O00_RS25630 () | 32541..33233 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| E5O00_RS25635 () | 33244..34227 | + | 984 | WP_021513963.1 | IncI1-type conjugal transfer protein TraN | - |
| E5O00_RS25640 () | 34230..35519 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| E5O00_RS25645 () | 35519..36223 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| E5O00_RS25650 () | 36223..36750 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| E5O00_RS25655 () | 36801..37205 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| E5O00_RS25660 () | 37269..37457 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| E5O00_RS25665 () | 37441..38241 | + | 801 | WP_060527642.1 | IncI1-type conjugal transfer protein TraT | - |
| E5O00_RS25670 () | 38331..41375 | + | 3045 | WP_071447696.1 | IncI1-type conjugal transfer protein TraU | - |
| E5O00_RS25675 () | 41375..41989 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| E5O00_RS25680 () | 41956..43158 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| E5O00_RS25685 () | 43187..43771 | + | 585 | WP_060527640.1 | IncI1-type conjugal transfer protein TraX | - |
| E5O00_RS25690 () | 43868..45966 | + | 2099 | Protein_45 | DotA/TraY family protein | - |
| E5O00_RS25695 () | 46037..46699 | + | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| E5O00_RS25700 () | 46771..46980 | - | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| E5O00_RS26165 () | 47312..47488 | + | 177 | WP_001054901.1 | hypothetical protein | - |
| E5O00_RS25705 () | 48147..48398 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| E5O00_RS25710 () | 48470..48622 | - | 153 | WP_001331364.1 | Hok/Gef family protein | - |
| E5O00_RS25715 () | 48895..49881 | + | 987 | WP_151884633.1 | hypothetical protein | - |
| E5O00_RS25720 () | 50099..51307 | + | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| E5O00_RS25725 () | 51326..52396 | + | 1071 | WP_000151579.1 | IncI1-type conjugal transfer protein TrbB | - |
| E5O00_RS25730 () | 52389..54680 | + | 2292 | WP_072107381.1 | conjugal transfer protein TrbC | - |
| E5O00_RS25735 () | 54717..57416 | - | 2700 | WP_011264053.1 | IncI1-type relaxase NikB | - |
| E5O00_RS25740 () | 57427..57759 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| E5O00_RS25745 () | 57993..58328 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| E5O00_RS25750 () | 58414..59262 | - | 849 | WP_021513954.1 | DUF4942 domain-containing protein | - |
| E5O00_RS25760 () | 59612..59809 | + | 198 | WP_052975742.1 | hypothetical protein | - |
| E5O00_RS25765 () | 59843..60094 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| E5O00_RS25770 () | 60125..60319 | - | 195 | WP_151884634.1 | hypothetical protein | - |
| E5O00_RS25780 () | 60382..61308 | - | 927 | WP_000038335.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E5O00_RS25785 () | 61373..61639 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| E5O00_RS25790 () | 61732..62166 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| E5O00_RS25805 () | 62895..63395 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| E5O00_RS25815 () | 63843..65018 | - | 1176 | WP_151884635.1 | transposase | - |
| E5O00_RS25820 () | 65148..65867 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| E5O00_RS25825 () | 65864..66298 | - | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| E5O00_RS25830 () | 66353..68311 | - | 1959 | WP_151884636.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O00_RS25835 () | 68373..68606 | - | 234 | WP_112341507.1 | DUF905 domain-containing protein | - |
| E5O00_RS25840 () | 68663..69190 | - | 528 | WP_112341509.1 | single-stranded DNA-binding protein | - |
| E5O00_RS25850 () | 69574..69888 | - | 315 | WP_024199621.1 | hypothetical protein | - |
| E5O00_RS25860 () | 69959..70150 | - | 192 | WP_001697954.1 | hypothetical protein | - |
| E5O00_RS25865 () | 70147..70569 | - | 423 | WP_061671614.1 | DUF1380 family protein | - |
| E5O00_RS25870 () | 70616..71041 | - | 426 | WP_061671615.1 | antirestriction protein | - |
| E5O00_RS26170 () | 71452..72228 | - | 777 | WP_061671617.1 | hypothetical protein | - |
| E5O00_RS25880 () | 72274..72708 | - | 435 | WP_061671618.1 | DUF1380 family protein | - |
| E5O00_RS25885 () | 72721..72942 | - | 222 | WP_021560304.1 | hypothetical protein | - |
| E5O00_RS25890 () | 72943..73626 | - | 684 | WP_000086147.1 | DNA methylase | - |
| E5O00_RS25895 () | 73702..74013 | - | 312 | WP_031942433.1 | hypothetical protein | - |
| E5O00_RS25900 () | 74010..74912 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| E5O00_RS25910 () | 75330..75578 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| E5O00_RS25915 () | 75575..76012 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E5O00_RS25920 () | 76012..77286 | + | 1275 | WP_021293549.1 | Y-family DNA polymerase | - |
| E5O00_RS25925 () | 77288..77704 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| E5O00_RS25930 () | 77697..78677 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| E5O00_RS25935 () | 79091..79399 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| E5O00_RS25940 () | 79486..80130 | - | 645 | WP_001144036.1 | ParA family protein | - |
| E5O00_RS25945 () | 80310..81089 | - | 780 | WP_001164201.1 | site-specific integrase | - |
| E5O00_RS25950 () | 81091..81504 | - | 414 | WP_151884637.1 | hypothetical protein | - |
| E5O00_RS25960 () | 82073..82330 | + | 258 | WP_000371885.1 | hypothetical protein | - |
| E5O00_RS25965 () | 82330..82920 | + | 591 | WP_000194573.1 | hypothetical protein | - |
| E5O00_RS25970 () | 82938..83285 | - | 348 | WP_000142441.1 | hypothetical protein | - |
| E5O00_RS25975 () | 83414..83749 | + | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| E5O00_RS25980 () | 83771..85651 | - | 1881 | WP_001283343.1 | colicin 1A | - |
| E5O00_RS25990 () | 85930..87276 | - | 1347 | WP_032082920.1 | hypothetical protein | - |
| E5O00_RS26000 () | 87630..88223 | + | 594 | WP_000517696.1 | hypothetical protein | - |
| E5O00_RS26005 () | 88505..89092 | - | 588 | WP_024189984.1 | serine acetyltransferase | - |
| E5O00_RS26010 () | 89392..89733 | + | 342 | WP_000578011.1 | hypothetical protein | - |
| E5O00_RS26175 () | 89929..90039 | - | 111 | Protein_100 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|