MGE detailed information
MGE type: Prophage MGE length: 38231 bp
Accession: NZ_CP044145 Location: 2257272..2295502 Organism: Escherichia coli O157 strain AR-0428 Replicon: chromosome
Accession: NZ_CP044145 Location: 2257272..2295502 Organism: Escherichia coli O157 strain AR-0428 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V40_RS12120 () | 2253127..2253927 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| F4V40_RS12125 () | 2253940..2254791 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| F4V40_RS12130 () | 2254846..2255304 | + | 459 | WP_000156258.1 | DUF986 family protein | - |
| F4V40_RS12135 () | 2255734..2256300 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| F4V40_RS12140 () | 2256297..2257106 | - | 810 | WP_000010147.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| F4V40_RS12145 () | 2257272..2257481 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| F4V40_RS12150 () | 2257494..2257637 | - | 144 | WP_001295496.1 | YobF family protein | - |
| F4V40_RS12155 () | 2258306..2258593 | - | 288 | WP_001006862.1 | YebO family protein | - |
| F4V40_RS12160 () | 2258668..2258811 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| F4V40_RS12165 () | 2258971..2259210 | + | 240 | WP_001211007.1 | membrane protein | - |
| F4V40_RS12170 () | 2259354..2260145 | - | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| F4V40_RS12175 () | 2260322..2261695 | + | 1374 | WP_001127211.1 | MFS transporter | - |
| F4V40_RS12180 () | 2261741..2262622 | - | 882 | WP_000984517.1 | protease HtpX | - |
| F4V40_RS12185 () | 2262814..2264862 | - | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| F4V40_RS12190 () | 2264882..2265580 | - | 699 | WP_000431368.1 | RNA chaperone ProQ | - |
| F4V40_RS12195 () | 2265677..2266174 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| F4V40_RS12200 () | 2266304..2267587 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| F4V40_RS12205 () | 2267556..2270189 | + | 2634 | WP_001302055.1 | hypothetical protein | VF |
| F4V40_RS12210 () | 2270270..2271709 | + | 1440 | WP_001302304.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| F4V40_RS12215 () | 2271827..2272063 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| F4V40_RS12220 () | 2272168..2272359 | + | 192 | WP_001296140.1 | YebW family protein | - |
| F4V40_RS12225 () | 2272360..2273016 | - | 657 | Protein_2309 | protein-serine/threonine phosphatase | - |
| - () | 2273113..2273384 | + | 272 | - | - | Antitoxin Detail |
| - () | 2273151..2273254 | - | 104 | - | - | Toxin Detail |
| F4V40_RS12230 () | 2273412..2273753 | - | 342 | WP_000976483.1 | YebY family protein | - |
| F4V40_RS12235 () | 2273766..2274638 | - | 873 | WP_000879314.1 | copper homeostasis membrane protein CopD | - |
| F4V40_RS12240 () | 2274642..2275016 | - | 375 | WP_000168751.1 | CopC domain-containing protein YobA | - |
| F4V40_RS12245 () | 2275155..2275385 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| F4V40_RS12250 () | 2275487..2276143 | + | 657 | WP_000011656.1 | carbon-nitrogen hydrolase family protein | - |
| F4V40_RS12255 () | 2276167..2276829 | + | 663 | WP_000944243.1 | exodeoxyribonuclease X | - |
| F4V40_RS12260 () | 2276826..2278886 | - | 2061 | WP_000936917.1 | oligopeptidase B | - |
| F4V40_RS12265 () | 2279095..2279754 | - | 660 | WP_000024742.1 | tellurite resistance TerB family protein | - |
| F4V40_RS12270 () | 2280081..2280437 | - | 357 | WP_001295500.1 | protein YebF | - |
| F4V40_RS12275 () | 2280504..2280794 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| F4V40_RS12280 () | 2280928..2282106 | + | 1179 | WP_000173471.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| F4V40_RS12285 () | 2282162..2282803 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| F4V40_RS12290 () | 2282840..2284651 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| F4V40_RS12295 () | 2284886..2286361 | - | 1476 | WP_000301737.1 | glucose-6-phosphate dehydrogenase | - |
| F4V40_RS12300 () | 2286699..2287568 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| F4V40_RS12305 () | 2287696..2289138 | + | 1443 | WP_000091169.1 | pyruvate kinase | - |
| F4V40_RS12310 () | 2289269..2290240 | - | 972 | WP_000448391.1 | Lipid A biosynthesis myristoyltransferase | VF |
| F4V40_RS12315 () | 2290360..2291682 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| F4V40_RS12320 () | 2291698..2292630 | - | 933 | WP_001303192.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| F4V40_RS12325 () | 2292709..2293464 | + | 756 | WP_000202996.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| F4V40_RS12330 () | 2293461..2294246 | + | 786 | WP_000571476.1 | hypothetical protein | VF |
| F4V40_RS12335 () | 2294492..2295502 | - | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| F4V40_RS12340 () | 2295511..2296122 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| F4V40_RS12345 () | 2296261..2296326 | - | 66 | WP_010723105.1 | stress response small protein YobI | - |
| F4V40_RS12350 () | 2296397..2296999 | + | 603 | WP_001024949.1 | YebB family permuted papain-like enzyme | - |
| F4V40_RS12355 () | 2297001..2297522 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| F4V40_RS12360 () | 2297557..2298297 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| F4V40_RS12365 () | 2298326..2298778 | - | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|